BAC Information

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BAC

Clone NameB6Ng01-222B10
Chromosome15 (Build37)
Map Location 99,719,325 - 99,720,353
singlet/doubletsinglet
Overlap genenone
Upstream geneDhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481
Downstream geneLOC100042918, 1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222B10.bB6Ng01-222B10.g
ACCGA037208GA037209
length1,040487
definitionB6Ng01-222B10.b B6Ng01-222B10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcatatgttgaacaatttgcattcttcccagatagcctaacta
gaatggtatgagtgtattaaagataatttctagaattaaagttatccctg
tagcaagcacgtgttttttaagaaggaattagccaggttttgctgttgtt
cccagtgtcttttgagacatggcttctgtatgtagcccaggctgtcctgg
agctcactacatagaccagaccatcctaatcagcatagtgagtttgaggc
cagcctgggctacaggaggacaggctcaaaaggacagcaaaaagaattag
gcattctttgcttgtagttttattttcccagaatataggaataaaattac
ttctcgtgtggaaacctttaaaaataactcagactatgttctattaaaga
gcaaaaccattcgaaaatgtcaaggcttgagaataaagtctgctctttat
aaacaacagccacataaataccacaaatcaaggaaggggatttcctgact
tctgcttccaagcaattccaataaatgaaggtggaagtgattgtcctttg
gaaaaaactcactgctggcaagattaacacacttccggccactctgttag
ggttttattcattatttattcaaattaatgagaactaacacattcctctt
gcccccacccccagctttccgtcgggattttaaacactcccccaagtact
tcagcagatgacaagctattgggattctgtcggcttctgaaaaagctgaa
tagtaaattgtttgaggctggagtcactgttctgtggtggggaatggtat
cacatgagggagctgatgcattaggaagggcgagggggccccacacccgg
gcgtacaccctcacgctgggagaagtgaggctcgggctttgcagtcaata
agttcgtttgcgggtcctttttacattcttttttagaatactgtaaacct
taagaactgacactcccatggactgtacataatggctgttttgcttttca
caatacacccctgactacccacttttccacccccccatct
gaattcactttgtagaccaggctggcctcgaactcagaaatccgcctgtc
tttgcctgtgacataaatttttgctagtttctttttttgttgttgtttgg
gttttttgtttgtttgtttttgttgttgttgttgagacagggtttctctg
tgtagccctggctgtcctggaactcactttgtagtgtagaccaggctggc
ctcaaactcagaaatctgcctgcctctgcctcccgagtgctgggattaaa
ggagtgtggcaccacacctggctttttggttttttgagacagggtttctc
tgtatagccatggctgtcctggaactcactttgtaaagcaggctggcctc
aaactcagaaatccgccttcctctgccttccaagtgctgggattaaaggc
gtgcgccaccaccaccgggcagtcaccaccaccttctaagacgtgctttt
acaattttatcaaatacaggtggtggacttggagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_99719325_99720353
seq2: B6Ng01-222B10.b_47_1086

seq1  GAATTCCTCATATGTTGAACAATTTGCATTCTTCCCAGATAGCCTAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATATGTTGAACAATTTGCATTCTTCCCAGATAGCCTAACTA  50

seq1  GAATGGTATGAGTGTATTAAAGATAATTTCTAGAATTAAAGTTATCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTATGAGTGTATTAAAGATAATTTCTAGAATTAAAGTTATCCCTG  100

seq1  TAGCAAGCACGTGTTTTTTAAGAAGGAATTAGCCAGGTTTTGCTGTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGCACGTGTTTTTTAAGAAGGAATTAGCCAGGTTTTGCTGTTGTT  150

seq1  CCCAGTGTCTTTTGAGACATGGCTTCTGTATGTAGCCCAGGCTGTCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTCTTTTGAGACATGGCTTCTGTATGTAGCCCAGGCTGTCCTGG  200

seq1  AGCTCACTACATAGACCAGACCATCCTAATCAGCATAGTGAGTTTGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTACATAGACCAGACCATCCTAATCAGCATAGTGAGTTTGAGGC  250

seq1  CAGCCTGGGCTACAGGAGGACAGGCTCAAAAGGACAGCAAAAAGAATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGGCTACAGGAGGACAGGCTCAAAAGGACAGCAAAAAGAATTAG  300

seq1  GCATTCTTTGCTTGTAGTTTTATTTTCCCAGAATATAGGAATAAAATTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTTTGCTTGTAGTTTTATTTTCCCAGAATATAGGAATAAAATTAC  350

seq1  TTCTCGTGTGGAAACCTTTAAAAATAACTCAGACTATGTTCTATTAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGTGTGGAAACCTTTAAAAATAACTCAGACTATGTTCTATTAAAGA  400

seq1  GCAAAACCATTCGAAAATGTCAAGGCTTGAGAATAAAGTCTGCTCTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACCATTCGAAAATGTCAAGGCTTGAGAATAAAGTCTGCTCTTTAT  450

seq1  AAACAACAGCCACATAAATACCACAAATCAAGGAAGGGGATTTCCTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACAGCCACATAAATACCACAAATCAAGGAAGGGGATTTCCTGACT  500

seq1  TCTGCTTCCAAGCAATTCCAATAAATGAAGGTGGAAGTGATTGTCCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCAAGCAATTCCAATAAATGAAGGTGGAAGTGATTGTCCTTTG  550

seq1  GAAAAAACTCACTGCTGGCAAGATTAACACACTTCCGGCCACTCTGTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACTCACTGCTGGCAAGATTAACACACTTCCGGCCACTCTGTTAG  600

seq1  GGTTTTATTCATTATTTATTCAAATTAATGAGAACTAACACATTCCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTATTCATTATTTATTCAAATTAATGAGAACTAACACATTCCTCTT  650

seq1  GCCCCCACCCCCAGCTTTCCGTCGGGATTTTAAACACTCCCCCAAGTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCACCCCCAGCTTTCCGTCGGGATTTTAAACACTCCCCCAAGTACT  700

seq1  TCAGCAGATGACAAGCTATTGGGATTCTGTCGGCTTCTGAAAAAGCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGATGACAAGCTATTGGGATTCTGTCGGCTTCTGAAAAAGCTGAA  750

seq1  TAGTAAATTGTTTGAGGCTGGAGTCACTGTTCTGTGGT-GGGAATGGTAT  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAGTAAATTGTTTGAGGCTGGAGTCACTGTTCTGTGGTGGGGAATGGTAT  800

seq1  CACATGAGGGAGCTGATGCATTAGGAAGGG-GAGGGGG-CCCACACCCAG  847
      |||||||||||||||||||||||||||||| ||||||| ||||||||| |
seq2  CACATGAGGGAGCTGATGCATTAGGAAGGGCGAGGGGGCCCCACACCCGG  850

seq1  GCGTACACCCTCAGGCTGGGAG-AGTGA-GCTCGGGCTTTGCAGTCAA-G  894
      ||||||||||||| |||||||| ||||| |||||||||||||||||||  
seq2  GCGTACACCCTCACGCTGGGAGAAGTGAGGCTCGGGCTTTGCAGTCAATA  900

seq1  AGTTTGTTTGCGGTTCCTTTTTAC-TTC-TTTTTAGAATACTTTAAAACT  942
      |||| |||||||| |||||||||| ||| ||||||||||||| |||| ||
seq2  AGTTCGTTTGCGGGTCCTTTTTACATTCTTTTTTAGAATACTGTAAACCT  950

seq1  TAGTATCTGACA-TTCCAT-GCCTGTACATAATGG-TGTTTTGTTTTTCT  989
      ||  | |||||| | |||| | ||||||||||||| ||||||| ||||| 
seq2  TAAGAACTGACACTCCCATGGACTGTACATAATGGCTGTTTTGCTTTTCA  1000

seq1  CAGATTCACCCCTGA-TTCCCATTTTTCACCCCCCCCATCT  1029
      || || ||||||||| | |||| |||||  |||||||||||
seq2  CA-ATACACCCCTGACTACCCACTTTTCCACCCCCCCATCT  1040