BAC Information

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BAC

Clone NameB6Ng01-222E10
Chromosome15 (Build37)
Map Location 56,329,248 - 56,330,397
singlet/doubletsinglet
Overlap genenone
Upstream geneCol14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
Downstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984, BC026439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222E10.bB6Ng01-222E10.g
ACCGA037338GA037339
length5091,140
definitionB6Ng01-222E10.b B6Ng01-222E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atcatcttacaacaaatcccccccaaaaagaatctctctctctctctctc
tctctctctctctctctctctctctctctctctctctctgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgagagagagagaaagtgtgaaaaaaaaat
aatatgaacaaacaatcattggtcaccgagatctcgcgagtgcgggggtt
tagttcaccaatataaagatatatgtttatatacatgatatagtatgtgg
aagagtgtgtgggcaaccttttgtatatatcctcatatacatatatatat
acaaataataagatataggtctggagaatgggtgtgtgagcgagtgagcg
agagaaacagctagcatgcgcatgcacatatttaataatatatattttca
tttataatttatctaaagagatggggatttacattgtaagtgagaaagtc
agcgtgattatatctttatttcaaaagactatgtctcaatggacaggctc
ccacattgt
gaattcttctgtgtgggctgaagtacatagctcagtctgaacaagtatta
ccatgtcccacactgggatgttatatgcagtaatgaataaatccttacga
taaagccctctgtaaatatgaagtgctattgagatgtagagtaatacact
ggacatctttgttttccatcagacacatcccatgggatattttcttcctt
ccagaacatggacactccacagagagtgcatctggcgactctgactctgc
caagagttcaaaagcaaattgttctaaggtgaatggctgagaactagtgt
gcaaaggtagtaaaagacatggatctctgctgcctgaaggttaaaagatg
caccaaaatgtacaatgaggtaggtgttttcccctgggagaatgaaagga
agaaacatttctgactacccttcccccaagcccctttgcttaccctccca
aaaaaattgcacttgactaatgtaactttgttttgatttcctgagtggtc
ttgggttacctaatatctggcttgcttccatagatggttctttcttagat
ctaccaagcaaaactcatgcttaagccattttcattaggagctgagcagt
acatgatcagaaatggcctcatgaaatgtcatgattagaagagatcaaag
gcccagcttcattggtgttgcctgcttctctctacttcgtcaaccctctg
aacctgaccaagccccagctctccagcatttgcacaatctgggaaagata
atttctccagagaagtcttcttgaaagcacatggcttgcaggtttttcac
gtggcccacgtcacagtccctgggctgaatggtctatctgttctctgaag
agaacctgtgcttggtcactacagctgcttttacaatggcttgtagtgct
gaatgggattttaattaacactgtggctaaaagcagtcttctgagccagc
cctttcctcagcataactgagtcatttcagaatgcaatcctggccaaatc
cattaccaagctgtgctctgtaattgtgctgtaggacaattgtcttcatc
atgaagacctccgtttaaattctgctctactctcagagctgcatttcaat
ataattgagaatatttgctacccactctcagatgttatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_56329248_56330397
seq2: B6Ng01-222E10.g_64_1203 (reverse)

seq1  TGATAACATTTCTTGGAG-GTGGGTAGC-AATA-TCTCAAATTTATATTG  47
      ||||||||| |    ||| ||||||||| |||| ||||||  ||||||||
seq2  TGATAACATCT----GAGAGTGGGTAGCAAATATTCTCAA--TTATATTG  44

seq1  AAAATGCAAGGCTCTGAGAGGTAAGGAGCCAGAATTTAAACGGAGGTCTT  97
       |||||||  ||||||||| |||  ||| |||||||||||||||||||||
seq2  -AAATGCA--GCTCTGAGA-GTA--GAG-CAGAATTTAAACGGAGGTCTT  87

seq1  CCATGATGAAGGACAA-TGTCCTTACAGCACAATTACAGAGCACAGCTTT  146
       ||||||||| ||||| ||||| |||||||||||||||||||||||| ||
seq2  -CATGATGAA-GACAATTGTCC-TACAGCACAATTACAGAGCACAGC-TT  133

seq1  GGTAATGGATTTGGCCAGGATTGCA-TCTGAAATGACTCAG-TATGCTGA  194
      ||||||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  GGTAATGGATTTGGCCAGGATTGCATTCTGAAATGACTCAGTTATGCTGA  183

seq1  GGAAA-GGCTGGCTCAGAGAACTGCTTTTAGCCACAGTGTTAATTAAAAT  243
      ||||| ||||||||||||  ||||||||||||||||||||||||||||||
seq2  GGAAAGGGCTGGCTCAGAAGACTGCTTTTAGCCACAGTGTTAATTAAAAT  233

seq1  CCCATTCAGCACTACAAGCCATTGTAAAAGCAGCTGTAGTGACCAAGCAC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCAGCACTACAAGCCATTGTAAAAGCAGCTGTAGTGACCAAGCAC  283

seq1  AGGTTCTCTTCAGAGAACAGATAGACCATTCAGCCCAGGGACTGTGACGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTCTTCAGAGAACAGATAGACCATTCAGCCCAGGGACTGTGACGT  333

seq1  GGGCCACGTGAAAAACCTGCAAGCCATGTGCTTTCAAGAAGACTTCTCTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCACGTGAAAAACCTGCAAGCCATGTGCTTTCAAGAAGACTTCTCTG  383

seq1  GAGAAATTATCTTTCCCAGATTGTGCAAATGCTGGAGAGCTGGGGCTTGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATTATCTTTCCCAGATTGTGCAAATGCTGGAGAGCTGGGGCTTGG  433

seq1  TCAGGTTCAGAGGGTTGACGAAGTAGAGAGAAGCAGGCAACACCAATGAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTCAGAGGGTTGACGAAGTAGAGAGAAGCAGGCAACACCAATGAA  483

seq1  GCTGGGCCTTTGATCTCTTCTAATCATGACATTTCATGAGGCCATTTCTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCCTTTGATCTCTTCTAATCATGACATTTCATGAGGCCATTTCTG  533

seq1  ATCATGTACTGCTCAGCTCCTAATGAAAATGGCTTAAGCATGAGTTTTGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTACTGCTCAGCTCCTAATGAAAATGGCTTAAGCATGAGTTTTGC  583

seq1  TTGGTAGATCTAAGAAAGAACCATCTATGGAAGCAAGCCAGATATTAGGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGATCTAAGAAAGAACCATCTATGGAAGCAAGCCAGATATTAGGT  633

seq1  AACCCAAGACCACTCAGGAAATCAAAACAAAGTTACATTAGTCAAGTGCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGACCACTCAGGAAATCAAAACAAAGTTACATTAGTCAAGTGCA  683

seq1  ATTTTTTTGGGAGGGTAAGCAAAGGGGCTTGGGGGAAGGGTAGTCAGAAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTGGGAGGGTAAGCAAAGGGGCTTGGGGGAAGGGTAGTCAGAAA  733

seq1  TGTTTCTTCCTTTCATTCTCCCAGGGGAAAACACCTACCTCATTGTACAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTCCTTTCATTCTCCCAGGGGAAAACACCTACCTCATTGTACAT  783

seq1  TTTGGTGCATCTTTTAACCTTCAGGCAGCAGAGATCCATGTCTTTTACTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGCATCTTTTAACCTTCAGGCAGCAGAGATCCATGTCTTTTACTA  833

seq1  CCTTTGCACACTAGTTCTCAGCCATTCACCTTAGAACAATTTGCTTTTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCACACTAGTTCTCAGCCATTCACCTTAGAACAATTTGCTTTTGA  883

seq1  ACTCTTGGCAGAGTCAGAGTCGCCAGATGCACTCTCTGTGGAGTGTCCAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGGCAGAGTCAGAGTCGCCAGATGCACTCTCTGTGGAGTGTCCAT  933

seq1  GTTCTGGAAGGAAGAAAATATCCCATGGGATGTGTCTGATGGAAAACAAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGAAGGAAGAAAATATCCCATGGGATGTGTCTGATGGAAAACAAA  983

seq1  GATGTCCAGTGTATTACTCTACATCTCAATAGCACTTCATATTTACAGAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCAGTGTATTACTCTACATCTCAATAGCACTTCATATTTACAGAG  1033

seq1  GGCTTTATCGTAAGGATTTATTCATTACTGCATATAACATCCCAGTGTGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTATCGTAAGGATTTATTCATTACTGCATATAACATCCCAGTGTGG  1083

seq1  GACATGGTAATACTTGTTCAGACTGAGCTATGTACTTCAGCCCACACAGA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGTAATACTTGTTCAGACTGAGCTATGTACTTCAGCCCACACAGA  1133

seq1  AGAATTC  1150
      |||||||
seq2  AGAATTC  1140