BAC Information

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BAC

Clone NameB6Ng01-228A20
Chromosome15 (Build37)
Map Location 10,992,713 - 10,993,141
singlet/doubletsinglet
Overlap genenone
Upstream genePrlr, Agxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14, C1qtnf3, Amacr, Slc45a2, Rxfp3
Downstream geneAdamts12, Tars, LOC100039772, Npr3, LOC381002, Sub1, LOC100040027
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228A20.bB6Ng01-228A20.g
ACCGA041560GA041561
length4231,150
definitionB6Ng01-228A20.b B6Ng01-228A20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caggaggttgaagctgaaagaggccagagaatagattttaagacagccag
aaaggaatgcagcttcttgatttcagcccagtgaattctgttgcagatct
tcagaacttaagacaataaatctgtgttgttttaagacagtaagtttgta
aatttccactagcaaaacacaggagccagtgtccctcagaaagtcttgat
agctatgtttcccagtgtggagtcctttgggctttccatctagggccttg
cattttgggtccctggggatggtgtggctgccctgacccaatgcaagatc
acctagtagccagacatcttgctgaaggtgtgtgattggctgtcagccaa
agagccctccatacatgaggccaaattccttctgaatggaataagggcgg
cgggggggctggggggtgggggg
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcaccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccata
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggtgcctgtgccacaaacctctcagccgggcagacccccgtgct
ctcaccaggaaggtggccggctgtctggagctgaagatggcgccgcccag
aagctctgcgactctcgcccgtcccagaaacggctggcactctgtatttc
cacacgggtcacccgtgcagcctgccctccgcgggagtcccgggagccaa
gaatggcttcccgcctggcgcctgtgccacaaacttctcaggccaggcag
aacccccgtgcctctcaccaagaaagtggccggctgtcttggagctgagg
attggcgtcgcccagagctctgcgacttctccgcctggtcctaagaaacg
gctggccactctgttattccaacacgtccactcggtgccagcctgaccct
tcgcctggaagttcctcgggagcccagaaggctctccgctcggccgcctg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_10992713_10993141
seq2: B6Ng01-228A20.b_43_471

seq1  GAATTCCAGGAGGTTGAAGCTGAAAGAGGCCAGAGAATAGATTTTAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAGGTTGAAGCTGAAAGAGGCCAGAGAATAGATTTTAAGAC  50

seq1  AGCCAGAAAGGAATGCAGCTTCTTGATTTCAGCCCAGTGAATTCTGTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAAGGAATGCAGCTTCTTGATTTCAGCCCAGTGAATTCTGTTGC  100

seq1  AGATCTTCAGAACTTAAGACAATAAATCTGTGTTGTTTTAAGACAGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTCAGAACTTAAGACAATAAATCTGTGTTGTTTTAAGACAGTAAG  150

seq1  TTTGTAAATTTCCACTAGCAAAACACAGGAGCCAGTGTCCCTCAGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAATTTCCACTAGCAAAACACAGGAGCCAGTGTCCCTCAGAAAGT  200

seq1  CTTGATAGCTATGTTTCCCAGTGTGGAGTCCTTTGGGCTTTCCATCTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAGCTATGTTTCCCAGTGTGGAGTCCTTTGGGCTTTCCATCTAGG  250

seq1  GCCTTGCATTTTGGGTCCCTGGGGATGGTGTGGCTGCCCTGACCCAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCATTTTGGGTCCCTGGGGATGGTGTGGCTGCCCTGACCCAATGC  300

seq1  AAGATCACCTAGTAGCCAGACATCTTGCTGAAGGTGTGTGATTGGCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCACCTAGTAGCCAGACATCTTGCTGAAGGTGTGTGATTGGCTGTC  350

seq1  AGCCAAAGAGCCCTCCATACATGAGGCCAAATTCCTTCTGAATGGAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAGAGCCCTCCATACATGAGGCCAAATTCCTTCTGAATGGAATAA  400

seq1  GGGCGGCGGGGGGGCTGGGGGGTGGGGGG  429
      |||||||||||||||||||||||||||||
seq2  GGGCGGCGGGGGGGCTGGGGGGTGGGGGG  429