BAC Information

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BAC

Clone NameB6Ng01-237A04
Chromosome15 (Build37)
Map Location 46,629,689 - 46,630,246
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039389, EG432951
Downstream geneLOC100039438, LOC665130, LOC100039485, LOC100039493, Csmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237A04.bB6Ng01-237A04.g
ACCGA048083GA048084
length5581,209
definitionB6Ng01-237A04.b B6Ng01-237A04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgaaattcttcataatttttcccctgtgcccatattttcaa
tatggaatttcttatgaaattcttgggcaaatggatgtacctggaggata
acatcctgagtgaggtaacccaatcacaaaagcagtcacttgatatgcac
tcactgataagtggatattagcccagaaacctaaaatacccaagataaaa
cttccaaaatacaagaaaatcaagatggaagatcaacacatggacacttc
attcctccctagaacagggaataaaatatccatggaaagagttgcagcca
taaagtttagagctaagatgaaaggatggaccagtcagagactgccccat
ctgggggtccatctaataatcagccaccaaacacagacactattgcatac
accagcaagattttgctgaaagggccctgatatagctgtctcctctgagg
ctttgccagtgcctgacaagtacagaagtggatgcccacagtcatctatt
ggatccaacacagggcccccagtgtaggagctagagaaagtacccaagag
ctgaaagg

gaattctcaggagaggaatctcaaatggccaagaagcacttccagaaatg
ttcaacatccttaatcatcagagagatgtaaatcaaaaaggactctgaaa
ttctattttatgttgagagaatatcatacattctatatgtatatatgtat
gtatatgtggatgtagcacctattaataataaatctgatggactgggctt
aggcaggaaatagaaagggagacatatgaggttcagaaaggattctgaga
gagtgccaagtcagagattcattcaggaagatgtgacaatatagatatgt
agtacctgaacacagataatagccatgtgtcagaatgaatagtacaataa
atatgttaatttaatttatagtctactgagagaagatcctatctatatgg
ccaaagtatttataaatatattttgagtctgaatcttatttctgtaagca
tgaagaactaaactaaacttctacgattttatatctgtaaaaatggctaa
aatcaacactagtgacagttcatgatgtcaaggctgtggagcaaggaaac
acctcaattgctggtggaaatttaaatttgtacagccagttcggaaataa
atattgtggtttcttagaaaattggtaatatatattcctcaaaattcagc
tatactacaactgaacatatatccaaaagattttccactacaccagaaga
gcaattgcttactatggacatagcagccttatttgtaataaccagaaatt
gaaacaaactagatgttcctcaatagaataatggataaagagcatgtagt
acatttatacaatgtattattactgggctgttgaaagcaatgtaactatg
aagtttgcaggcaaatgaatggaactagaaaattcactatgagtgaggta
acacagatctagaaacacaaacgttgtatatactcacttataaatggata
ttaaatgtaaagtaaaagatatcatgctatattcttgttagtcaaaaggc
taagtaacaagaaagctcaagggacaataacattgattcttccctgaagg
aaaacagaatgcatttcagggtgactgagaaatatgactaagacaagagg
ataggtgtgaacaacatttgaaagagaagagctctggaaggtgaccactg
cattcacaggccaaatccatttgtggcaaagatataggaaaccctatagt
ggggtagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_46629689_46630246
seq2: B6Ng01-237A04.b_47_604

seq1  GAATTCTTATGAAATTCTTCATAATTTTTCCCCTGTGCCCATATTTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGAAATTCTTCATAATTTTTCCCCTGTGCCCATATTTTCAA  50

seq1  TATGGAATTTCTTATGAAATTCTTGGGCAAATGGATGTACCTGGAGGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAATTTCTTATGAAATTCTTGGGCAAATGGATGTACCTGGAGGATA  100

seq1  ACATCCTGAGTGAGGTAACCCAATCACAAAAGCAGTCACTTGATATGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTGAGTGAGGTAACCCAATCACAAAAGCAGTCACTTGATATGCAC  150

seq1  TCACTGATAAGTGGATATTAGCCCAGAAACCTAAAATACCCAAGATAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGATAAGTGGATATTAGCCCAGAAACCTAAAATACCCAAGATAAAA  200

seq1  CTTCCAAAATACAAGAAAATCAAGATGGAAGATCAACACATGGACACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAAATACAAGAAAATCAAGATGGAAGATCAACACATGGACACTTC  250

seq1  ATTCCTCCCTAGAACAGGGAATAAAATATCCATGGAAAGAGTTGCAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCCCTAGAACAGGGAATAAAATATCCATGGAAAGAGTTGCAGCCA  300

seq1  TAAAGTTTAGAGCTAAGATGAAAGGATGGACCAGTCAGAGACTGCCCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTAGAGCTAAGATGAAAGGATGGACCAGTCAGAGACTGCCCCAT  350

seq1  CTGGGGGTCCATCTAATAATCAGCCACCAAACACAGACACTATTGCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGTCCATCTAATAATCAGCCACCAAACACAGACACTATTGCATAC  400

seq1  ACCAGCAAGATTTTGCTGAAAGGGCCCTGATATAGCTGTCTCCTCTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAAGATTTTGCTGAAAGGGCCCTGATATAGCTGTCTCCTCTGAGG  450

seq1  CTTTGCCAGTGCCTGACAAGTACAGAAGTGGATGCCCACAGTCATCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCAGTGCCTGACAAGTACAGAAGTGGATGCCCACAGTCATCTATT  500

seq1  GGATCCAACACAGGGCCCCCAGTGTAGGAGCTAGAGAAAGTACCCAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCAACACAGGGCCCCCAGTGTAGGAGCTAGAGAAAGTACCCAAGAG  550

seq1  CTGAAAGG  558
      ||||||||
seq2  CTGAAAGG  558


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