BAC Information

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BAC

Clone NameB6Ng01-245B05
Chromosome15 (Build37)
Map Location 23,556,197 - 23,708,443
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545091, Cdh18, LOC624863
Downstream geneLOC666989, LOC666999, LOC100040492, LOC100040499
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245B05.bB6Ng01-245B05.g
ACCGA054054GA054055
length1,1501,086
definitionB6Ng01-245B05.b B6Ng01-245B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,556,197 - 23,557,337)(23,707,360 - 23,708,443)
sequence
gaattcttaaaaactggttttaaggaagcatgtctatatcttagacatgc
ctagctaaactgattcacttagaagatttaagagaagagagataaagaaa
ctctgccatgctgtctgaatgaagcaaggaagtgcttcctcccccccccc
ccccaagacagggtttctctgtgtagccctggctatcctagaactcacgg
aagttcttaatttacaacctttgagtttaactttgcaacatgaacactta
ttcaatgtctagcctcctggtggtcagtctctaaaattacttgaagaaat
taagtgaaacctctctttctctgtctctctctctctctctctctctctct
ctctctctctctctagttctcattaaattcctgttgtttctttattttga
agaacagttggtaatggctatttctaaaatttttcatattgtttcagtta
atatgaactttaagattgtggctaaagttcagtttcctgggtaaaacttt
tttctacttaaacatttagcattttagaactattatcattttcagaatag
ttatagtttaactactgaccattttatcttggctttttcttactaaactt
gctatcattattttatcttatctcaccatgaagaactccactaatcttaa
ctacttagcaagaacctgattcacaaacattgtgtctaacataagattta
acaattgccacaataatttttcattttcttataactaaatagtccttcaa
cattatttatttcctcgtattaaaatactcaaatttttatcagcccattt
ctctaatacacttcttactgttttgttgtttcactcatctttcttcttca
gtgtctcacccatgttgctcttggtgtttggtagagctaccttccctctc
tagacttctacccctgtgcctaccttcacttctgtcttcatagaggctta
gggtcattttgctgtaatttattaattttcccattcagacttgatctcaa
ctagttctccatgctttgctttttcagacacccattctcacaaagacaga
ggactaattgcttctctaattcataacttctctctggaagtatattattc
tcaggtcagccaggtgaatcgtttatatcttttattcaagaataaattgg

gaattcataggagtccaacatagttgacagcgttgttactcttatggggt
tataggggtccagacctccctgcaacgcttggctatatctacatctttct
cagctgcttttagtacccatcagagggcaaccatgttaggcttgtgtcta
aagacaaaacaaaacattagtaataatgtcagggtttggtgcccattcaa
ggaaaggatcctgaattgggatggtcactggtcagctattccttcagtct
cttcttcttttttgtcccagcatttcttttagacatgggcacttttgaag
taatgtccattcttaactgctcctggttcctcctgtattagacattttaa
gtttttttttttttttttttttttttttttttttttagtgatatagcaaa
atatgccaaatgaacaacttttaagggagggaaaatttatattgctgcaa
aattagatgtctcagcctatggatgccgggctccattgcattacaatctt
cattgtcaagatgacttgttactccccttccccacacacacacacatgca
agtgcactgaaggatcaatggagttacagatgtgagctatttgtcttatc
tggatttacattatttttaaactcagaccttcacactggtggagagtgca
ctttattcattgaattagctcattaccaccaatgttcatgtatttttact
aaatcaattcatatatttaagtatgcttctaacacttctacagagatatt
atttttcaccaatgtaaaaaacaggagggcagagcaattctgaaattgtg
catagtaccacattaagggaaaatcaaattttaaaaagtatagattgttt
attttgagcttttataaaatacattttgagtatactcatccctatatctt
cctcaatcaattcccccttccctccaacttcattttttgccacattaaaa
acaatgatgtttgttccactatgttcatagcagcttttattcatatacca
gccaaactggaccaccctagatattcctaccaaagattgaataagaaaat
cttgctatatctatcattcagtattattcagctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23556197_23557337
seq2: B6Ng01-245B05.b_44_1193

seq1  GAATTCTTAAAAACTGGTTTTAAGGAAGCATGTCTATATCTTAGACATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAAACTGGTTTTAAGGAAGCATGTCTATATCTTAGACATGC  50

seq1  CTAGCTAAACTGATTCACTTAGAAGATTTAAGAGAAGAGAGATAAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTAAACTGATTCACTTAGAAGATTTAAGAGAAGAGAGATAAAGAAA  100

seq1  CTCTGCCATGCTGTCTGAATGAAGCAAGGAAGTGCTTCCTCCCCCCCCCC  150
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTCTGCCATGCTGTCTGAATGAAGCAAGGAAGTGCTTCCT-CCCCCCCCC  149

seq1  CCCCCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTATCCTAGAACTCACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTATCCTAGAACTCACG  199

seq1  GAAGTTCTTAATTTACAACCTTTGAGTTTAACTTTGCAACATGAACACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCTTAATTTACAACCTTTGAGTTTAACTTTGCAACATGAACACTT  249

seq1  ATTCAATGTCTAGCCTCCTGGTGGTCAGTCTCTAAAATTACTTGAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGTCTAGCCTCCTGGTGGTCAGTCTCTAAAATTACTTGAAGAAA  299

seq1  TTAAGTGAAACCTCTCTTTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGAAACCTCTCTTTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTC  349

seq1  TCTCTCTCTCTCTCTAGTTCTCATTAAATTCCTGTTGTTTCTTTATTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTAGTTCTCATTAAATTCCTGTTGTTTCTTTATTTTG  399

seq1  AAGAACAGTTGGTAATGGCTATTTCTAAAATTTTTCATATTGTTTCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGTTGGTAATGGCTATTTCTAAAATTTTTCATATTGTTTCAGTT  449

seq1  AATATGAACTTTAAGATTGTGGCTAAAGTTCAGTTTCCTGGGTAAAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAACTTTAAGATTGTGGCTAAAGTTCAGTTTCCTGGGTAAAACTT  499

seq1  TTTTCTACTTAAACATTTAGCATTTTAGAACTATTATCATTTTCAGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACTTAAACATTTAGCATTTTAGAACTATTATCATTTTCAGAATA  549

seq1  GTTATAGTTTAACTACTGACCATTTTATCTTGGCTTTTTCTTACTAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGTTTAACTACTGACCATTTTATCTTGGCTTTTTCTTACTAAACT  599

seq1  TGCTATCATTATTTTATCTTATCTCACCATGAAGAACTCCACTAATCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCATTATTTTATCTTATCTCACCATGAAGAACTCCACTAATCTTA  649

seq1  ACTACTTAGCAAGAACCTGATTCACAAACATTGTGTCTAACATAAGATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTAGCAAGAACCTGATTCACAAACATTGTGTCTAACATAAGATTT  699

seq1  AACAATTGCCACAATAATTTTTCATTTTCTTATAACTAAATAGTCCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTGCCACAATAATTTTTCATTTTCTTATAACTAAATAGTCCTTCA  749

seq1  ACATTATTTATTTCCTCGTATTAAAATACTCAAATTTTTATCAGCCCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTTATTTCCTCGTATTAAAATACTCAAATTTTTATCAGCCCATT  799

seq1  TCTCTAATACACTTCTTACTGTTTTGTTGTTTCACTCATCTTTCTTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAATACACTTCTTACTGTTTTGTTGTTTCACTCATCTTTCTTCTTC  849

seq1  AGTGTCTCACCCATGTTGCTCTTGGTGTTTGGTAGAGCTACCTTCCCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCACCCATGTTGCTCTTGGTGTTTGGTAGAGCTACCTTCCCTCT  899

seq1  CTAGACTTCTACCCCTGTGCCTACC-TCACTTCTGTCTTCATAGAGGCTT  949
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTAGACTTCTACCCCTGTGCCTACCTTCACTTCTGTCTTCATAGAGGCTT  949

seq1  A-GGTCATTTTGCTGTAATTTTATTAA-TTTCCCA-TCAGACTTGATCTC  996
      | |||||||||||||||| |||||||| ||||||| ||||||||||||||
seq2  AGGGTCATTTTGCTGTAA-TTTATTAATTTTCCCATTCAGACTTGATCTC  998

seq1  -ACTAGTTCTCCATTGCTTTGCTTTTTCAGACAACCATTCTCACAAAGAC  1045
       |||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  AACTAGTTCTCCA-TGCTTTGCTTTTTCAGACACCCATTCTCACAAAGAC  1047

seq1  AGA-GACTAATTGC-TCTCTTATTCATAACTTCTCTCTGAAGTTATA-TA  1092
      ||| |||||||||| ||||| |||||||||||||||||| |  |||| ||
seq2  AGAGGACTAATTGCTTCTCTAATTCATAACTTCTCTCTGGAAGTATATTA  1097

seq1  TTCTCAAGTACAGCCA-GTG-ATCG-TTATATC-TTTATTCAAGAAT-AA  1137
      |||||| || |||||| ||| |||| ||||||| ||||||||||||| ||
seq2  TTCTCAGGT-CAGCCAGGTGAATCGTTTATATCTTTTATTCAAGAATAAA  1146

seq1  TTGG  1141
      ||||
seq2  TTGG  1150

seq1: chr15_23707360_23708443
seq2: B6Ng01-245B05.g_64_1149 (reverse)

seq1  AATAGCTGATTAATACTTGATTGTATAGATATA-CCAGATTTTCTTTATC  49
      ||||||||| |||||| ||| || ||||||||| | |||||||| |||| 
seq2  AATAGCTGAATAATAC-TGAATG-ATAGATATAGCAAGATTTTC-TTATT  47

seq1  CATTCTTTGGTTTAGGGATATCTAGGTTGTTCCCAGTTT-GCTGGTATTA  98
      || |||||||  |||| ||||||||| || | ||||||| ||||||| ||
seq2  CAATCTTTGG--TAGGAATATCTAGGGTGGT-CCAGTTTGGCTGGTA-TA  93

seq1  TGAAT-AAAGCTGCTATGAACATAGTGGAACAAACATCATTGTTTTTAAT  147
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAAAGCTGCTATGAACATAGTGGAACAAACATCATTGTTTTTAAT  143

seq1  GTGGCAAAAAATG-AGTTGGAGGGAAGGGGGAATTGATTGAGGAAGATAT  196
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAAAAATGAAGTTGGAGGGAAGGGGGAATTGATTGAGGAAGATAT  193

seq1  AGGGATGAGTATACTCAAAATGTATTTTAT-AAAGCTCAAAAT-AACAAT  244
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  AGGGATGAGTATACTCAAAATGTATTTTATAAAAGCTCAAAATAAACAAT  243

seq1  CTATACTTTTTAAAATTTTGATTTT-CCTTAATGT-GTACTATGCACAAT  292
      ||||||||||||||| ||||||||| ||||||||| ||||||||||||||
seq2  CTATACTTTTTAAAA-TTTGATTTTCCCTTAATGTGGTACTATGCACAAT  292

seq1  TTCAGAATTGCTCTGCCCTCCTG-TTTTTACATTGGTG-AAAATAATATC  340
      ||||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  TTCAGAATTGCTCTGCCCTCCTGTTTTTTACATTGGTGAAAAATAATATC  342

seq1  TCTGTAGAAGTGTTAGAAGCATACTTAAATATATGAATTGATTTAGTAAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGAAGTGTTAGAAGCATACTTAAATATATGAATTGATTTAGTAAA  392

seq1  AATACATGAACATTGGTGGTAATGAGCTAATTCAATGAATAAAGTGCACT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGAACATTGGTGGTAATGAGCTAATTCAATGAATAAAGTGCACT  442

seq1  CTCCACCAGTGTGAAGGTCTGAGTTTAAAAATAATGTAAATCCAGATAAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCAGTGTGAAGGTCTGAGTTTAAAAATAATGTAAATCCAGATAAG  492

seq1  ACAAATAGCTCACATCTGTAACTCCATTGATCCTTCAGTGCACTTGCATG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGCTCACATCTGTAACTCCATTGATCCTTCAGTGCACTTGCATG  542

seq1  TGTGTGTGTGTGGGGAAGGGGAGTAACAAGTCATCTTGACAATGAAGATT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGGGGAAGGGGAGTAACAAGTCATCTTGACAATGAAGATT  592

seq1  GTAATGCAATGGAGCCCGGCATCCATAGGCTGAGACATCTAATTCTGCAG  640
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTAATGCAATGGAGCCCGGCATCCATAGGCTGAGACATCTAATTTTGCAG  642

seq1  CAATATAAATCTTCCCTCCCTTAAAAGTTGTTCATCTGGCATATTTTGCT  690
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  CAATATAAATTTTCCCTCCCTTAAAAGTTGTTCATTTGGCATATTTTGCT  692

seq1  ATATCACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTAAAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTAAAA  742

seq1  TGTCTAATACAGGAGGAACCAGGAGCAGTTAAGAATGGACATTACTTCAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAATACAGGAGGAACCAGGAGCAGTTAAGAATGGACATTACTTCAA  792

seq1  AAGTGCCCATGTCTAAAAGAAATGCTGGGACAAAAAAGAAGAAGAGACTG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCCATGTCTAAAAGAAATGCTGGGACAAAAAAGAAGAAGAGACTG  842

seq1  AAGGAATAGCTGACCAGTGACCATCCCAATTCAGGATCCTTTCCTTGAAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAGCTGACCAGTGACCATCCCAATTCAGGATCCTTTCCTTGAAT  892

seq1  GGGCACCAAACCCTGACATTATTACTAATGTTTTGTTTTGTCTTTAGACA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCAAACCCTGACATTATTACTAATGTTTTGTTTTGTCTTTAGACA  942

seq1  CAAGCCTAACATGGTTGCCCTCTGATGGGTACTAAAAGCAGCTGAGAAAG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTAACATGGTTGCCCTCTGATGGGTACTAAAAGCAGCTGAGAAAG  992

seq1  ATGTAGATATAGCCAAGCGTTGCAGGGAGGTCTGGACCCCTATAACCCCA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATATAGCCAAGCGTTGCAGGGAGGTCTGGACCCCTATAACCCCA  1042

seq1  TAAGAGTAACAACGCTGTCAACTATGTTGGACTCCTATGAATTC  1084
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTAACAACGCTGTCAACTATGTTGGACTCCTATGAATTC  1086