BAC Information

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BAC

Clone NameB6Ng01-247I12
Chromosome15 (Build37)
Map Location 53,136,182 - 53,137,244
singlet/doubletsinglet
Overlap geneExt1
Upstream geneSlc30a8, LOC100039748, Thrap6, LOC100039745
Downstream geneSamd12, EG665097, EG621631, Tnfrsf11b, LOC665280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247I12.bB6Ng01-247I12.g
ACCGA055842GA055843
length1,086931
definitionB6Ng01-247I12.b B6Ng01-247I12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagagtatcttaaagttcacgttcccaatagtcttcaaactgtg
tggccagactttttgtggaaccttgaaacaaacttaaaaaggtcaatgcc
catctacatcaaggaaaagaagtcacgtctacttctgaagccacatgtta
aacaggctcatgaagcaatagccagagagcatggaacccagaatttgtaa
actttcaaaacatctgaatgcacataaactctgcctcttattgtgaatca
gaatatcacacacacacacacacacacacacacacacacacgtaatctca
agttcatgtgcttgaaaaatagcaaactcaaaacaatttaaaaacaatct
ttagtggggaaatacttattttgctagtcagtgggaaaatgtttctcctg
agtttcctggaaggctattttcagcaatctatgacacttttctgtgtctg
ttatttgcttgctccaagcataagctagcctagcaagcttccactcttgc
cttttagaagcagctctgagtaaagaatgggttgcagaagtcctcttctc
tgaagtgcctatgctccctctagcccagtgcctggctcagagcaggttca
gattcagatagacatagccagaatagagagactatccagaaggaacaact
gatgtgaactaacaagagcctgggaaaggctgtgtactaaagcaagccat
ctctttgtactcagccacaaacttactgtgatcagtatcacacaatagaa
ggacatacacctctctttttccgttcgaattttcttctactagaaacctg
gcagtcttacatgttaaccactaagtacgggtgattttggggtttttcct
tttctttcttctttctttacatgagtgatccccagaattcctgctggaga
acagtcttacagaactaacaccctctcctctcaatgcttttcccattggg
cagagaaggagacataaacaacactatttggaatagaagggctgcaggaa
ccaaattggacaccaagaaaagaaaaaaaaaaaaaaagttctgaagcagc
ctaattttcaccttccaggagtgaagttccacacca
gaattctcacctgagttaataccgaatggcagagaagtacctgaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactactggaggatccagcaatacctctcctggg
catatatccagaagataccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaaaac
ctaggatacccaagatataagatacaattttcctaaacacatgaaactca
agaaaaatgaagactgaagtgtggacactatgcccctccttagaagtggg
aacaaaacacccttggaaggagttacagagacaaagtttggagctgatat
gaaaggatggactattgtagagactgccatatccagggatcccaccccat
aatcagcatccaaacgctgacaccattggcataccctagcaagattttat
ccaaaaggaccccagatgtagcttgtctccttgtgagattattgccgggg
ccctagcaaaacacagaagtggattccttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_53136182_53137244
seq2: B6Ng01-247I12.b_45_1130

seq1  GAATTCAAGAGTATCTTAAAGTTCACGTTCCCAATAGTCTTCAAACTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGTATCTTAAAGTTCACGTTCCCAATAGTCTTCAAACTGTG  50

seq1  TGGCCAGACTTTTTGTGGAACCTTGAAACAAACTTAAAAAGGTCAATGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGACTTTTTGTGGAACCTTGAAACAAACTTAAAAAGGTCAATGCC  100

seq1  CATCTACATCAAGGAAAAGAAGTCACGTCTACTTCTGAAGCCACATGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACATCAAGGAAAAGAAGTCACGTCTACTTCTGAAGCCACATGTTA  150

seq1  AACAGGCTCATGAAGCAATAGCCAGAGAGCATGGAACCCAGAATTTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTCATGAAGCAATAGCCAGAGAGCATGGAACCCAGAATTTGTAA  200

seq1  ACTTTCAAAACATCTGAATGCACATAAACTCTGCCTCTTATTGTGAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAAAACATCTGAATGCACATAAACTCTGCCTCTTATTGTGAATCA  250

seq1  GAATATCACACACACACACACACACACACACACACACACACGTAATCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCACACACACACACACACACACACACACACACACACGTAATCTCA  300

seq1  AGTTCATGTGCTTGAAAAATAGCAAACTCAAAACAATTTAAAAACAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATGTGCTTGAAAAATAGCAAACTCAAAACAATTTAAAAACAATCT  350

seq1  TTAGTGGGGAAATACTTATTTTGCTAGTCAGTGGGAAAATGTTTCTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGGGAAATACTTATTTTGCTAGTCAGTGGGAAAATGTTTCTCCTG  400

seq1  AGTTTCCTGGAAGGCTATTTTCAGCAATCTATGACACTTTTCTGTGTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTGGAAGGCTATTTTCAGCAATCTATGACACTTTTCTGTGTCTG  450

seq1  TTATTTGCTTGCTCCAAGCATAAGCTAGCCTAGCAAGCTTCCACTCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGCTTGCTCCAAGCATAAGCTAGCCTAGCAAGCTTCCACTCTTGC  500

seq1  CTTTTAGAAGCAGCTCTGAGTAAAGAATGGGTTGCAGAAGTCCTCTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGAAGCAGCTCTGAGTAAAGAATGGGTTGCAGAAGTCCTCTTCTC  550

seq1  TGAAGTGCCTATGCTCCCTCTAGCCCAGTGCCTGGCTCAGAGCAGGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGCCTATGCTCCCTCTAGCCCAGTGCCTGGCTCAGAGCAGGTTCA  600

seq1  GATTCAGATAGACATAGCCAGAATAGAGAGACTATCCAGAAGGAACAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGATAGACATAGCCAGAATAGAGAGACTATCCAGAAGGAACAACT  650

seq1  GATGTGAACTAACAAGAGCCTGGGAAAGGCTGTGTACTAAAGCAAGCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAACTAACAAGAGCCTGGGAAAGGCTGTGTACTAAAGCAAGCCAT  700

seq1  CTCTTTGTACTCAGCCAC-AACTTACTGTGATCAGTATCACACAATAGAA  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTCTTTGTACTCAGCCACAAACTTACTGTGATCAGTATCACACAATAGAA  750

seq1  GGACATACACCTCTCTTTTTCCGTTCGAATTTTCTTCTACTAG-AACCTG  798
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGACATACACCTCTCTTTTTCCGTTCGAATTTTCTTCTACTAGAAACCTG  800

seq1  GCAGTCTTACATGTTAACCACTAAGTACGGGTGATTT---GGGTTTTCCT  845
      |||||||||||||||||||||||||||||||||||||   || |||||||
seq2  GCAGTCTTACATGTTAACCACTAAGTACGGGTGATTTTGGGGTTTTTCCT  850

seq1  TT--CTTCTTC-TTCTTTACATGAGTGAT-CCCAGAATTCCTGCTGGAGA  891
      ||   |||||| ||||||||||||||||| ||||||||||||||||||||
seq2  TTTCTTTCTTCTTTCTTTACATGAGTGATCCCCAGAATTCCTGCTGGAGA  900

seq1  ACAGTCTTACAGAACTAACACCCTCTCCTCTCAATGC-TTTCCCATTGGG  940
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACAGTCTTACAGAACTAACACCCTCTCCTCTCAATGCTTTTCCCATTGGG  950

seq1  CAGAGAAGGAGACATAAACAACACTATTTGG-ATAG-AGGGCTGCAGGAA  988
      ||||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  CAGAGAAGGAGACATAAACAACACTATTTGGAATAGAAGGGCTGCAGGAA  1000

seq1  CCAAA-TGGACACCAAG-AAAGAAAAAAAAAAAAA---GTCTG-AGCAGC  1032
      ||||| ||||||||||| |||||||||||||||||    |||| ||||||
seq2  CCAAATTGGACACCAAGAAAAGAAAAAAAAAAAAAAAGTTCTGAAGCAGC  1050

seq1  C--AATTTCACC-TCCA-GAGTGAAG-TCCACACCA  1063
      |  | ||||||| |||| |||||||| |||||||||
seq2  CTAATTTTCACCTTCCAGGAGTGAAGTTCCACACCA  1086