BAC Information

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BAC

Clone NameB6Ng01-248F04
Chromosome15 (Build37)
Map Location 52,073,260 - 52,074,377
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720
Downstream geneLOC665219, Slc30a8, LOC100039748, Thrap6, LOC100039745, Ext1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248F04.bB6Ng01-248F04.g
ACCGA056430GA056431
length1,2011,125
definitionB6Ng01-248F04.b B6Ng01-248F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagcgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccataaacagggattcaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagaatgtagctgtctcttgtgagactatgccggggcctatcaaa
cacagaagtgggttgctcacagtcagctaatggatggatcataggactcc
caatggaaggagctaagaagaaagtagccgaagagcttaaagggattctg
caacccttataggttggaacaacattatgactaaacagtaccccggagct
tctttgtctctagctgcaatataatatcaaaagaatggactagtcgtcaa
tcactgggaaaagaagaggcccatgacctggccaacttatatggccagtt
caggatccaaggccaaaaatggggaagtggttggcaaaggctaagtgagc
g
gaattctccatcctataagcaaaatgataactttttccccaagtgctttt
ttgtgttttgagactttgcctcctttgccacagccaagggaaataagcca
atttcagcatattattttgtgctctggggaaagaaagatgggttagtgca
gtctacctcgcactgctgaaaccacagcctgagttttctacctcctggcc
cagtccttgacctttatcttgagtctcaaggactgtttcatatgctcttc
ctcccacacagtacttcaatcttgttacatggtaggctggggctgtgctg
caagcagaatacttgctgtcctgaataagtcatgaggtaaagggctttat
taagagtaaagagataacacagcagaatttagtaaaattctctcaacagg
gctgagacccttggtgttagacttctttctaacatagaagggttttggtt
cagcccccaatgttacaaaggaacaaacaagcaaacattttgcaactagt
tggttagaaatagaacaatacaatctacattaaatcatgttccagcaatt
ccatctcacccagtgtaagatgctatgacactttaaatttgttgggtaaa
gcatgaaatcatctgtcgcttatgaattaacctatgaaatggtatggttg
caaacacaagcagcaattaaaattcttcagaaatagcattgagggagagg
aaataaaaaataagtagagagaaacagaacagcatactcttccatttctt
ttaaatattttttttatttttacatacacagacatatctgtgcaccacgt
gcatgcctggtgccagcagaggttaaaagaagaaaatgttggatcctcat
caagtcactaggagactaagcacatcctttcccagtgaggccattcaaag
gctgtccatttaggggcacaggatccacagtggggcaggcaacaggctca
ggaacagcctctgctccagttgttttggggagaacccacatgaagaccaa
gctgctcatctgctaacatatgtgcaggggccaatatgtcccatccagaa
tcaacccatggtggtgatcaggtcttctggaaagtcctagagtccaagta
aggtgaacttgttggtcttcctatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_52073260_52074377
seq2: B6Ng01-248F04.g_64_1188 (reverse)

seq1  CATAGGAAGACCAACAGAGTCACCTAACTTGGACTCTTAGGGACTTCCAG  50
      ||||||||||||||||   |||||| |||||||||| ||||   ||||||
seq2  CATAGGAAGACCAACAAGTTCACCTTACTTGGACTC-TAGGACTTTCCAG  49

seq1  -AGACTGAATCACCAACCAACGGGTGA-TCTGGGATGGACATA-TGGCCC  97
       ||||   |||||| ||||  || ||| |||||   ||||||| ||||||
seq2  AAGACCTGATCACC-ACCATGGGTTGATTCTGGATGGGACATATTGGCCC  98

seq1  CTGCACATATG-TAGCAGATGAGCAGCTTGGTCTTCATGTGGG-TCTCCC  145
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  CTGCACATATGTTAGCAGATGAGCAGCTTGGTCTTCATGTGGGTTCTCCC  148

seq1  --AAACAACTGGAGCAGAGGCTGTTCCTGAGCCTGTTGCCTGCCCACCTG  193
        |||||||||||||||||||||||||||||||||||||||||||  |||
seq2  CAAAACAACTGGAGCAGAGGCTGTTCCTGAGCCTGTTGCCTGCCCCACTG  198

seq1  TGGATCCTGTGCCCCTAAATGGACAGCC-TTGAATGGCCTCACTGGGAAA  242
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGGATCCTGTGCCCCTAAATGGACAGCCTTTGAATGGCCTCACTGGGAAA  248

seq1  GGATGTGCTTAGTCTCCTAGTGACTTGATGAGGATCCAACATTTTCTTCT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGCTTAGTCTCCTAGTGACTTGATGAGGATCCAACATTTTCTTCT  298

seq1  TTTAACCTCTGCTGGCACCAGGCATGCACGTGGTGCACAGATATGTCTGT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCTCTGCTGGCACCAGGCATGCACGTGGTGCACAGATATGTCTGT  348

seq1  GTATGTAAAAAT-AAAAAAATATTTAAAAGAAATGGAAGAGTATGCTGTT  391
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTATGTAAAAATAAAAAAAATATTTAAAAGAAATGGAAGAGTATGCTGTT  398

seq1  CTGTTTCTCTCTACTTATTTTTTATTTCCTCTCCCTCAATGCTATTTCTG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTCTCTACTTATTTTTTATTTCCTCTCCCTCAATGCTATTTCTG  448

seq1  AAGAATTTTAATTGCTGCTTGTGTTTGCAACCATACCATTTCATAGGTTA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTTAATTGCTGCTTGTGTTTGCAACCATACCATTTCATAGGTTA  498

seq1  ATTCATAAGCGACAGATGATTTCATGCTTTACCCAACAAATTTAAAGTGT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAGCGACAGATGATTTCATGCTTTACCCAACAAATTTAAAGTGT  548

seq1  CATAGCATCTTACACTGGGTGAGATGGAATTGCTGGAACATGATTTAATG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCATCTTACACTGGGTGAGATGGAATTGCTGGAACATGATTTAATG  598

seq1  TAGATTGTATTGTTCTATTTCTAACCAACTAGTTGCAAAATGTTTGCTTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGTATTGTTCTATTTCTAACCAACTAGTTGCAAAATGTTTGCTTG  648

seq1  TTTGTTCCTTTGTAACATTGGGGGCTGAACCAAAACCCTTCTATGTTAGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCTTTGTAACATTGGGGGCTGAACCAAAACCCTTCTATGTTAGA  698

seq1  AAGAAGTCTAACACCAAGGGTCTCAGCCCTGTTGAGAGAATTTTACTAAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTCTAACACCAAGGGTCTCAGCCCTGTTGAGAGAATTTTACTAAA  748

seq1  TTCTGCTGTGTTATCTCTTTACTCTTAATAAAGCCCTTTACCTCATGACT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGTGTTATCTCTTTACTCTTAATAAAGCCCTTTACCTCATGACT  798

seq1  TATTCAGGACAGCAAGTATTCTGCTTGCAGCACAGCCCCAGCCTACCATG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGGACAGCAAGTATTCTGCTTGCAGCACAGCCCCAGCCTACCATG  848

seq1  TAACAAGATTGAAGTACTGTGTGGGAGGAAGAGCATATGAAACAGTCCTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGATTGAAGTACTGTGTGGGAGGAAGAGCATATGAAACAGTCCTT  898

seq1  GAGACTCAAGATAAAGGTCAAGGACTGGGCCAGGAGGTAGAAAACTCAGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCAAGATAAAGGTCAAGGACTGGGCCAGGAGGTAGAAAACTCAGG  948

seq1  CTGTGGTTTCAGCAGTGCGAGGTAGACTGCACTAACCCATCTTTCTTTCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTTCAGCAGTGCGAGGTAGACTGCACTAACCCATCTTTCTTTCC  998

seq1  CCAGAGCACAAAATAATATGCTGAAATTGGCTTATTTCCCTTGGCTGTGG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCACAAAATAATATGCTGAAATTGGCTTATTTCCCTTGGCTGTGG  1048

seq1  CAAAGGAGGCAAAGTCTCAAAACACAAAAAAGCACTTGGGGAAAAAGTTA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGGCAAAGTCTCAAAACACAAAAAAGCACTTGGGGAAAAAGTTA  1098

seq1  TCATTTTGCTTATAGGATGGAGAATTC  1118
      |||||||||||||||||||||||||||
seq2  TCATTTTGCTTATAGGATGGAGAATTC  1125