BAC Information

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BAC

Clone NameB6Ng01-249K21
Chromosome15 (Build37)
Map Location 94,309,048 - 94,434,326
singlet/doubletdoublet
Overlap genePus7l, Irak4, Twf1
Upstream genePphln1, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631, D630010B17Rik, Adamts20
Downstream geneTmem117, LOC100043315, Nell2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249K21.bB6Ng01-249K21.g
ACCGA057435GA057436
length1,1421,106
definitionB6Ng01-249K21.b B6Ng01-249K21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,433,181 - 94,434,326)(94,309,048 - 94,310,147)
sequence
gaattcaaaatcagcctccagagttacacgctattgaacctactataatc
caggctattataaccgggaaatcaatgccgtttagacttcccttctgtaa
tattataaggggaaatgcgatactgctctgagaaacaagatagggaagct
cttcttacagtagagtctatcaccgatctagcttttgaactgaaaatcag
gaaaacctgcaggaaacaactcagagacaggtggaaacaaagactcggag
gtaggcggaagtgacgactcctggagacaggtggactcatgaggccactt
tccattctcctctgggcaaaacccagaagcagaaagccaagttagagatc
gcggaagactgtgtggaacactccctagcacataggttattagatcacag
actggctccgctaattctccctaccgtcgcccatcagctgctgggactta
aggttgcttcccctgtatttcagcaccttgaactcctgattcgctgagtt
cctggcttaaggagcgcttcgcagagaagtatggaaaccacattcctctt
ggtggagtgatgccctgctcagaagtactttcaaactgaaagaagagatg
gcaggaaataagaaaagttacagagagaaacgagagaggcgtgcggtcct
ttaaaatgccacggggacaactctgtcccttactctattaacattttatc
aaaatgtgaatcaaggccataaaagcatgtttaaacattaagattaagga
aaaacagagttttttttttaaagtaagctaagaagggtggcaatgaagat
atgattagagatcacataaattagcaacaaaaaatataatttaaaatttt
attttattttcaggaaatggaatgaaaaatgtccccagcgcttacttaat
gggttttctactcccgtggggaacttaatattcacagaaacacttaggac
cagccataagaaattggatagaaacacaatctattgtataactttacctg
tccattttcagtacagataggagaaaaaaaatgggagttcttttttcttt
ttcagcagccacatgggggcacagttaagagtcttcctatagcacagtga
accttctaccctgcacttccactactaacgcataatatagat

gaattctctcttgctacataaaaggcctagctaacatttgggcaaactga
gatcatggtcaaaaccccacagacgcaagtgcatcggctggagcacaccg
gttcagacgagtcttcgaagagtgaggggtgttgtaagaacactggtggc
ttcttcaaggagtctccttcacagtcctaggataaaggccgggtaaaggg
tgcgtaatgcccagcgtaatctgattgaggtaaatgagcttttcgggagg
tgttttgatgtctgttccccattaacgacagaacaaagccaaggagcagc
tctcgcctctgcctcccacgcacctcggctcacccctgtcaatcttaacc
acaacagatcttcctgttaactggcatgaacagaagtgttccgccatgca
tgtaaccgtggcttcaggcaaaaaaagaaaagaaaaaaaaacctttccta
ggacctagcagaattaataaaaagaagaattggataaggcaggagagaac
ttaaaccacggtatcattgactctccctcgcctggacttattttcatcct
atatttctcgtctggcttttaccaaaatatagagtggtctaaattcatct
taggttctcttacaacccacatactttcctccgttgtcttcccagtaagg
gagcaaagtacccttggaggcaaatctctgtttcctattaaactcgacca
agctctcagtgtcttctggccctttcaaagtggctgagttgaagtaattg
taataagtcccttctaataaggacagatataaaagcccgaagccacccac
aacccacagatgcatttcagcaataatttggactagagaaagatagttct
tctgttcacaaaagggaggggacattttgagactaggtgaaacctgaata
tctccccctccctctgcggctgcagagtcaaggaccagggtgtgagcccc
tctctgttactatatgtctctgtttatatggttctttagaacaagcaact
tattcttcttaagtcttgggctcatcgactgtgtctttatgaaaatgtct
tacttccacctctgacctttggtccttaaacaatgaaaagcgccatccaa
atgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94433181_94434326
seq2: B6Ng01-249K21.b_43_1184 (reverse)

seq1  ATCTATA-TATGCGTTTAGTAGTTTGAAAGTGCAGGGTAGAAGGTTTCAC  49
      ||||||| |||||| |||||||  || ||||||||||||||||| |||||
seq2  ATCTATATTATGCG-TTAGTAG--TGGAAGTGCAGGGTAGAAGG-TTCAC  46

seq1  TGTGGCTATTAGGAGACTCTTAACTGTGCCCCCATTGTGCTGCTGAAAA-  98
      ||| |||||  | ||||||||||||||||||||||   ||||||||||| 
seq2  TGT-GCTATAGGAAGACTCTTAACTGTGCCCCCATGTGGCTGCTGAAAAA  95

seq1  -GAAAAAGAACTCCCATTTTTTTCTTCCTATCTGTACTTGAAAATGGACA  147
        |||||||||||||||||||||  |||||||||||| ||||||||||||
seq2  GAAAAAAGAACTCCCATTTTTTTTCTCCTATCTGTAC-TGAAAATGGACA  144

seq1  GGTAAAGTTATACAAATAGATTGTGTTTCTATCCAATTTCTTATGGCTGG  197
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGTTATAC-AATAGATTGTGTTTCTATCCAATTTCTTATGGCTGG  193

seq1  TCCTAAGTGTTTCTGTGAATATTAAGTTCCCCACGGGAGTAGAAAACCCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGTGTTTCTGTGAATATTAAGTTCCCCACGGGAGTAGAAAACCCA  243

seq1  TTAAGTAAGCGCTGGGGACATTTTTCATTCCATTTCCTGAAAATAAAATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAAGCGCTGGGGACATTTTTCATTCCATTTCCTGAAAATAAAATA  293

seq1  AAATTTTAAATTATATTTTTTGTTGCTAATTTATGTGATCTCTAATCATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAAATTATATTTTTTGTTGCTAATTTATGTGATCTCTAATCATA  343

seq1  TCTTCATTGCCACCCTTCTTAGCTTACTTTAAAAAAAAAACTCTGTTTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTGCCACCCTTCTTAGCTTACTTTAAAAAAAAAACTCTGTTTTT  393

seq1  CCTTAATCTTAATGTTTAAACATGCTTTTATGGCCTTGATTCACATTTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATCTTAATGTTTAAACATGCTTTTATGGCCTTGATTCACATTTTG  443

seq1  ATAAAATGTTAATAGAGTAAGGGACAGAGTTGTCCCCGTGGCATTTTAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGTTAATAGAGTAAGGGACAGAGTTGTCCCCGTGGCATTTTAAA  493

seq1  GGACCGCACGCCTCTCTCGTTTCTCTCTGTAACTTTTCTTATTTCCTGCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCGCACGCCTCTCTCGTTTCTCTCTGTAACTTTTCTTATTTCCTGCC  543

seq1  ATCTCTTCTTTCAGTTTGAAAGTACTTCTGAGCAGGGCATCACTCCACCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTCTTTCAGTTTGAAAGTACTTCTGAGCAGGGCATCACTCCACCA  593

seq1  AGAGGAATGTGGTTTCCATACTTCTCTGCGAAGCGCTCCTTAAGCCAGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATGTGGTTTCCATACTTCTCTGCGAAGCGCTCCTTAAGCCAGGA  643

seq1  ACTCAGCGAATCAGGAGTTCAAGGTGCTGAAATACAGGGGAAGCAACCTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCGAATCAGGAGTTCAAGGTGCTGAAATACAGGGGAAGCAACCTT  693

seq1  AAGTCCCAGCAGCTGATGGGCGACGGTAGGGAGAATTAGCGGAGCCAGTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCAGCAGCTGATGGGCGACGGTAGGGAGAATTAGCGGAGCCAGTC  743

seq1  TGTGATCTAATAACCTATGTGCTAGGGAGTGTTCCACACAGTCTTCCGCG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCTAATAACCTATGTGCTAGGGAGTGTTCCACACAGTCTTCCGCG  793

seq1  ATCTCTAACTTGGCTTTCTGCTTCTGGGTTTTGCCCAGAGGAGAATGGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAACTTGGCTTTCTGCTTCTGGGTTTTGCCCAGAGGAGAATGGAA  843

seq1  AGTGGCCTCATGAGTCCACCTGTCTCCAGGAGTCGTCACTTCCGCCTACC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCTCATGAGTCCACCTGTCTCCAGGAGTCGTCACTTCCGCCTACC  893

seq1  TCCGAGTCTTTGTTTCCACCTGTCTCTGAGTTGTTTCCTGCAGGTTTTCC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAGTCTTTGTTTCCACCTGTCTCTGAGTTGTTTCCTGCAGGTTTTCC  943

seq1  TGATTTTCAGTTCAAAAGCTAGATCGGTGATAGACTCTACTGTAAGAAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCAGTTCAAAAGCTAGATCGGTGATAGACTCTACTGTAAGAAGA  993

seq1  GCTTCCCTATCTTGTTTCTCAGAGCAGTATCGCATTTCCCCTTATAATAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTATCTTGTTTCTCAGAGCAGTATCGCATTTCCCCTTATAATAT  1043

seq1  TACAGAAGGGAAGTCTAAACGGCATTGATTTCCCGGTTATAATAGCCTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGGGAAGTCTAAACGGCATTGATTTCCCGGTTATAATAGCCTGG  1093

seq1  ATTATAGTAGGTTCAATAGCGTGTAACTCTGGAGGCTGATTTTGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGTAGGTTCAATAGCGTGTAACTCTGGAGGCTGATTTTGAATTC  1142


seq1: chr15_94309048_94310147
seq2: B6Ng01-249K21.g_67_1172

seq1  GAATTCTCTCTTGCTACATAAAAGGCCTAGCTAACATTTGGGCAAACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTGCTACATAAAAGGCCTAGCTAACATTTGGGCAAACTGA  50

seq1  GATCATGGTCAAAACCCCACAGACGCAAGTGCATCGGCTGGAGCACACCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGTCAAAACCCCACAGACGCAAGTGCATCGGCTGGAGCACACCG  100

seq1  GTTCAGACGAGTCTTCGAAGAGTGAGGGGTGTTGTAAGAACACTGGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGACGAGTCTTCGAAGAGTGAGGGGTGTTGTAAGAACACTGGTGGC  150

seq1  TTCTTCAAGGAGTCTCCTTCACAGTCCTAGGATAAAGGCCGGGTAAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAGGAGTCTCCTTCACAGTCCTAGGATAAAGGCCGGGTAAAGGG  200

seq1  TGCGTAATGCCCAGCGTAATCTGATTGAGGTAAATGAGCTTTTCGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAATGCCCAGCGTAATCTGATTGAGGTAAATGAGCTTTTCGGGAGG  250

seq1  TGTTTTGATGTCTGTTCCCCATTAACGACAGAACAAAGCCAAGGAGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGATGTCTGTTCCCCATTAACGACAGAACAAAGCCAAGGAGCAGC  300

seq1  TCTCGCCTCTGCCTCCCACGCACCTCGGCTCACCCCTGTCAATCTTAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGCCTCTGCCTCCCACGCACCTCGGCTCACCCCTGTCAATCTTAACC  350

seq1  ACAACAGATCTTCCTGTTAACTGGCATGAACAGAAGTGTTCCGCCATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGATCTTCCTGTTAACTGGCATGAACAGAAGTGTTCCGCCATGCA  400

seq1  TGTAACCGTGGCTTCAGGCAAAAAAAGAAAAGAAAAAAAAACCTTTCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCGTGGCTTCAGGCAAAAAAAGAAAAGAAAAAAAAACCTTTCCTA  450

seq1  GGACCTAGCAGAATTAATAAAAAGAAGAATTGGATAAGGCAGGAGAGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTAGCAGAATTAATAAAAAGAAGAATTGGATAAGGCAGGAGAGAAC  500

seq1  TTAAACCACGGTATCATTGACTCTCCCTCGCCTGGACTTATTTTCATCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCACGGTATCATTGACTCTCCCTCGCCTGGACTTATTTTCATCCT  550

seq1  ATATTTCTCGTCTGGCTTTTACCAAAATATAGAGTGGTCTAAATTCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTCGTCTGGCTTTTACCAAAATATAGAGTGGTCTAAATTCATCT  600

seq1  TAGGTTCTCTTACAACCCACATACTTTCCTCCGTTGTCTTCCCAGTAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTCTCTTACAACCCACATACTTTCCTCCGTTGTCTTCCCAGTAAGG  650

seq1  GAGCAAAGTACCCTTGGAGGCAAATCTCTGTTTCCTATTAAACTCGACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAGTACCCTTGGAGGCAAATCTCTGTTTCCTATTAAACTCGACCA  700

seq1  AGCTCTCAGTGTCTTCTGGCCCTTTCAAAGTGGCTGAGTTGAAGTAATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCAGTGTCTTCTGGCCCTTTCAAAGTGGCTGAGTTGAAGTAATTG  750

seq1  TAATAAGTCCCTTCTAATAAGGACAGATATAAAAGCCCGAAGCCACCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTCCCTTCTAATAAGGACAGATATAAAAGCCCGAAGCCACCCAC  800

seq1  AACCCACAGATGCATTTCAGCAATAATTTGGACTAGAGAAAGATAGTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACAGATGCATTTCAGCAATAATTTGGACTAGAGAAAGATAGTTCT  850

seq1  TCTGTTCACAAAAGGGAGGGGACATTTTGAGACTAGGTGAAACCTGAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCACAAAAGGGAGGGGACATTTTGAGACTAGGTGAAACCTGAATA  900

seq1  TCTCCCCCTCCCTCTGCGGCTGCAGAGTCAAGGACCAGGGTGTGAGCCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCTCCCTCTGCGGCTGCAGAGTCAAGGACCAGGGTGTGAGCCCC  950

seq1  TCTCTGTTACTATATGTCTCTGTTTTATATGTTTCTTTAG-ACAAGCAAC  999
      |||||||||||||||||||||| |||||||| |||||||| |||||||||
seq2  TCTCTGTTACTATATGTCTCTG-TTTATATGGTTCTTTAGAACAAGCAAC  999

seq1  TTATTCTTCTTAAGTCTTGGGCTCATCGACTGTGTCTTTTATGAAAATGT  1049
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTATTCTTCTTAAGTCTTGGGCTCATCGACTGTGTC-TTTATGAAAATGT  1048

seq1  C-TACTT-CACCTCTGAC--TTTGTCC-TAAAC-ATGAAAAGCGCCAT-C  1092
      | ||||| ||||||||||  || |||| ||||| |||||||||||||| |
seq2  CTTACTTCCACCTCTGACCTTTGGTCCTTAAACAATGAAAAGCGCCATCC  1098

seq1  AAATGAGC  1100
      ||||||||
seq2  AAATGAGC  1106


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