BAC Information

Click to search

BAC

Clone NameB6Ng01-251P19
Chromosome15 (Build37)
Map Location 23,320,436 - 23,321,580
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545091, Cdh18
Downstream geneLOC624863, LOC666989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251P19.bB6Ng01-251P19.g
ACCGA059107GA059108
length2521,149
definitionB6Ng01-251P19.b B6Ng01-251P19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctatcccctttgcaacccaaaatctctcctcctattcttcctcagaagac
tgccttgtctggcctcagtaggctaggatgcacttaacacagaagaaact
tgatgcctcagggaagagtgatgctggtgtgggggcagtgggggagggtg
ggcaagtgggtggaagatacctctcaaaaccaggagaggtagtataggct
taagaacttggggaagggggataagtaagaggggggcaacttctgtaatt
ta
gaattcagaggacaaacttggggttggttctcatatattgcttgaaggta
aaattactcttgttctcagggctgcacatatttctgtgttatataaattc
tttatacttgaaaggtaaggttatgagatataaataaactgagatcaaaa
caattttacaataaatgaatattattaaacacccatgttttgacaatact
gcatatctacacagttttctgcacaagaaaccgtattctctaactcatat
tcatatttctggagtctgaaataattcttagtacatggaaagtgatcaat
agtccatgcctctcaaatatacttatgtctaatgtgttacttcattgaca
catgcagaatttcattttttttctgaaatatgaattgacaacagctaacc
tgtaccctatgtgttaaacataaatagttcacttaatcttgacttataat
taattgttcaattgttcttctcataccactgaggaaaagaagtcataaaa
attgagaaatgttttagtggaagcagctacaaatgaactgaatgtgtttt
tgatccagctgtgtattctcccttttaatgttgaagttatattgctcaaa
acccaacagaagagcagatagcttggcataaagtaggtgaaagaatacaa
agaattggactttctgtgaatatactgtcctcagtaataaaattgctcat
ttatcatctttttaaactattttttattaaatgtaaaatgagtcactaag
ctcttatttctaagtataagatatctaagttattttgtaacaactttaat
taaaataattattcagctatggtactaacaatatttagacaaattttttt
tatcttcttggtttctgcaagaagtacttacccaggacaatttttccttt
cccagggcagttggatttctcttactactcttttagaataatgctcaata
ctgtaatttgatacttcattatcaatgagctaagtgtgattttcatggga
agatttactcttcttaattttatctcattattctaagttattgtctttac
aatcattgctctttctccacataataatacagcacttttgctccttatat
aaatcaatttcatattaaatgtagaagtgcaatctatcacattcagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23320436_23321580
seq2: B6Ng01-251P19.g_69_1217 (reverse)

seq1  AGTCTG-ATGTGATAGATTGCAACTCTCTACA-TTAATATGAAATGGATT  48
      |||||| |||||||||||||| ||| |||||| |||||||||||| ||||
seq2  AGTCTGAATGTGATAGATTGC-ACT-TCTACATTTAATATGAAATTGATT  48

seq1  TATATTAAGGAGCAAAAGTGCTGTATTA-TATGT-GAGAAAGAGCAATGA  96
      |||| ||||||||||||||||||||||| ||||| |||||||||||||||
seq2  TATA-TAAGGAGCAAAAGTGCTGTATTATTATGTGGAGAAAGAGCAATGA  97

seq1  TTTGTAAAGACAATTACTTAGAATAATGAGATAAAATTAAG-AGAGTAAA  145
       ||||||||||||| |||||||||||||||||||||||||| ||||| ||
seq2  -TTGTAAAGACAATAACTTAGAATAATGAGATAAAATTAAGAAGAGT-AA  145

seq1  ATCTT-CCATGAAAATCACACTTAGCTCATTGATAATGAAGTATCAAATT  194
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCCATGAAAATCACACTTAGCTCATTGATAATGAAGTATCAAATT  195

seq1  ACAGTATTGAGCATTA-TCT-AAAGAGTAGTAAGAGAAATCCAACTGCCC  242
      |||||||||||||||| ||| |||||||||||||||||||||||||||||
seq2  ACAGTATTGAGCATTATTCTAAAAGAGTAGTAAGAGAAATCCAACTGCCC  245

seq1  TGGGAAAGGAAAAATTGTCCTGGGTAAGTACTTCTTGCAGAAACCAAGAA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAGGAAAAATTGTCCTGGGTAAGTACTTCTTGCAGAAACCAAGAA  295

seq1  GAT-AAAAAAATTTGTCTAAATATTGTTAGTACCATAGCTGAATAATTAT  341
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAAAATTTGTCTAAATATTGTTAGTACCATAGCTGAATAATTAT  345

seq1  TTTAATTAAAGTTGTTACAAAATAACTTAGATATCTTATACTTAGAAATA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAAAGTTGTTACAAAATAACTTAGATATCTTATACTTAGAAATA  395

seq1  AGAGCTTAGTGACTCATTTTACATTTAATAAAAAATAGTTTAAAAAGATG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTAGTGACTCATTTTACATTTAATAAAAAATAGTTTAAAAAGATG  445

seq1  ATAAATGAGCAATTTTATTACTGAGGACAGTATATTCACAGAAAGTCCAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGAGCAATTTTATTACTGAGGACAGTATATTCACAGAAAGTCCAA  495

seq1  TTCTTTGTATTCTTTCACCTACTTTATGCCAAGCTATCTGCTCTTCTGTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTATTCTTTCACCTACTTTATGCCAAGCTATCTGCTCTTCTGTT  545

seq1  GGGTTTTGAGCAATATAACTTCAACATTAAAAGGGAGAATACACAGCTGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTGAGCAATATAACTTCAACATTAAAAGGGAGAATACACAGCTGG  595

seq1  ATCAAAAACACATTCAGTTCATTTGTAGCTGCTTCCACTAAAACATTTCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAACACATTCAGTTCATTTGTAGCTGCTTCCACTAAAACATTTCT  645

seq1  CAATTTTTATGACTTCTTTTCCTCAGTGGTATGAGAAGAACAATTGAACA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTATGACTTCTTTTCCTCAGTGGTATGAGAAGAACAATTGAACA  695

seq1  ATTAATTATAAGTCAAGATTAAGTGAACTATTTATGTTTAACACATAGGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTATAAGTCAAGATTAAGTGAACTATTTATGTTTAACACATAGGG  745

seq1  TACAGGTTAGCTGTTGTCAATTCATATTTCAGAAAAAAAATGAAATTCTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTTAGCTGTTGTCAATTCATATTTCAGAAAAAAAATGAAATTCTG  795

seq1  CATGTGTCAATGAAGTAACACATTAGACATAAGTATATTTGAGAGGCATG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTCAATGAAGTAACACATTAGACATAAGTATATTTGAGAGGCATG  845

seq1  GACTATTGATCACTTTCCATGTACTAAGAATTATTTCAGACTCCAGAAAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTGATCACTTTCCATGTACTAAGAATTATTTCAGACTCCAGAAAT  895

seq1  ATGAATATGAGTTAGAGAATACGGTTTCTTGTGCAGAAAACTGTGTAGAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATGAGTTAGAGAATACGGTTTCTTGTGCAGAAAACTGTGTAGAT  945

seq1  ATGCAGTATTGTCAAAACATGGGTGTTTAATAATATTCATTTATTGTAAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTATTGTCAAAACATGGGTGTTTAATAATATTCATTTATTGTAAA  995

seq1  ATTGTTTTGATCTCAGTTTATTTATATCTCATAACCTTACCTTTCAAGTA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTGATCTCAGTTTATTTATATCTCATAACCTTACCTTTCAAGTA  1045

seq1  TAAAGAATTTATATAACACAGAAATATGTGCAGCCCTGAGAACAAGAGTA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATTTATATAACACAGAAATATGTGCAGCCCTGAGAACAAGAGTA  1095

seq1  ATTTTACCTTCAAGCAATATATGAGAACCAACCCCAAGTTTGTCCTCTGA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACCTTCAAGCAATATATGAGAACCAACCCCAAGTTTGTCCTCTGA  1145

seq1  ATTC  1145
      ||||
seq2  ATTC  1149