MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-254C16
Chromosome	15 (Build37)
Map Location	3,121,677 - 3,261,306
singlet/doublet	doublet
Overlap gene	EG666167, Sepp1, LOC100039139
Upstream gene	LOC674207, LOC666163
Downstream gene	Ghr, LOC223278, Fbxo4, AW549877, LOC100039196, Oxct1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC674207 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC666163 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG666167 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666167 MGI:3643213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 8 Proteins pseudo : _no_value

name	Sepp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20363 MGI:894288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100039139 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ghr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14600 MGI:95708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC223278 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:223278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins pseudo : _no_value

name	Fbxo4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106052 MGI:2146220
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AW549877 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106064 MGI:2146232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039196 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Oxct1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67041 MGI:1914291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sepp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110735407 GeneID:20363 MGI:894288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : selenoprotein P, plasma, 1 transcript_id : NM_001042613.1

name	Sepp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110735410 GeneID:20363 MGI:894288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : selenoprotein P, plasma, 1 transcript_id : NM_001042614.1

name	Sepp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110735409 GeneID:20363 MGI:894288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : selenoprotein P, plasma, 1 transcript_id : NM_009155.3

name	LOC100039139 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266361 GeneID:100039139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to hCG2006161 transcript_id : XM_001472338.1

name	Ghr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520599 GeneID:14600 MGI:95708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth hormone receptor transcript_id : NM_010284.2

name	Ghr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520604 GeneID:14600 MGI:95708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth hormone receptor transcript_id : NM_001048178.1

name	Ghr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520602 GeneID:14600 MGI:95708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth hormone receptor transcript_id : NM_001048147.1

name	Fbxo4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859770 GeneID:106052 MGI:2146220
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 4 transcript_id : NM_134099.1

name	AW549877 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52630433 GeneID:106064 MGI:2146232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW549877 transcript_id : NM_145930.2

name	LOC100039196 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266363 GeneID:100039196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039196 transcript_id : XM_001472433.1

name	Oxct1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378044 GeneID:67041 MGI:1914291
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-oxoacid CoA transferase 1 transcript_id : NM_024188.5

name	Sepp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110735408 GeneID:20363 MGI:894288
definition	GO_component : GO:0005576 - extracellular region [Evidence TAS]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008430 - selenium binding [Evidence IDA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0040007 - growth [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0009791 - post-embryonic development [Evidence IMP]; GO:0001887 - selenium metabolism [Evidence IMP] [Evidence IDA]; GO:0019953 - sexual reproduction [Evidence IMP] codon_start : 1 product : selenoprotein P precursor protein_id : NP_001036078.1 transl_except : (pos:3224848..3224850,aa:Sec) transl_except : (pos:3229342..3229344,aa:Sec) transl_except : (pos:3229396..3229398,aa:Sec) transl_except : (pos:3229519..3229521,aa:Sec) transl_except : (pos:3229555..3229557,aa:Sec) transl_except : (pos:3229621..3229623,aa:Sec) transl_except : (pos:3229663..3229665,aa:Sec) transl_except : (pos:3229669..3229671,aa:Sec) transl_except : (pos:3229690..3229692,aa:Sec) transl_except : (pos:3229696..3229698,aa:Sec)

name	Sepp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110735411 GeneID:20363 MGI:894288
definition	GO_component : GO:0005576 - extracellular region [Evidence TAS]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008430 - selenium binding [Evidence IDA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0040007 - growth [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0009791 - post-embryonic development [Evidence IMP]; GO:0001887 - selenium metabolism [Evidence IMP] [Evidence IDA]; GO:0019953 - sexual reproduction [Evidence IMP] codon_start : 1 product : selenoprotein P precursor protein_id : NP_001036079.1 transl_except : (pos:3224848..3224850,aa:Sec) transl_except : (pos:3229342..3229344,aa:Sec) transl_except : (pos:3229396..3229398,aa:Sec) transl_except : (pos:3229519..3229521,aa:Sec) transl_except : (pos:3229555..3229557,aa:Sec) transl_except : (pos:3229621..3229623,aa:Sec) transl_except : (pos:3229663..3229665,aa:Sec) transl_except : (pos:3229669..3229671,aa:Sec) transl_except : (pos:3229690..3229692,aa:Sec) transl_except : (pos:3229696..3229698,aa:Sec)

name	Sepp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74271806 CCDS:CCDS27357.1 GeneID:20363 MGI:894288
definition	GO_component : GO:0005576 - extracellular region [Evidence TAS]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008430 - selenium binding [Evidence IDA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0040007 - growth [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0009791 - post-embryonic development [Evidence IMP]; GO:0001887 - selenium metabolism [Evidence IMP] [Evidence IDA]; GO:0019953 - sexual reproduction [Evidence IMP] codon_start : 1 product : selenoprotein P precursor protein_id : NP_033181.3 transl_except : (pos:3224848..3224850,aa:Sec) transl_except : (pos:3229342..3229344,aa:Sec) transl_except : (pos:3229396..3229398,aa:Sec) transl_except : (pos:3229519..3229521,aa:Sec) transl_except : (pos:3229555..3229557,aa:Sec) transl_except : (pos:3229621..3229623,aa:Sec) transl_except : (pos:3229663..3229665,aa:Sec) transl_except : (pos:3229669..3229671,aa:Sec) transl_except : (pos:3229690..3229692,aa:Sec) transl_except : (pos:3229696..3229698,aa:Sec)

name	LOC100039139 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266362 GeneID:100039139
definition	codon_start : 1 product : similar to hCG2006161 protein_id : XP_001472388.1

name	Ghr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520600 CCDS:CCDS27358.1 GeneID:14600 MGI:95708
definition	GO_component : GO:0019898 - extrinsic to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 note : isoform 1 precursor is encoded by transcript variant 1; growth hormone receptor/binding protein product : growth hormone receptor isoform 1 precursor protein_id : NP_034414.2

name	Ghr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520603 GeneID:14600 MGI:95708
definition	GO_component : GO:0019898 - extrinsic to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 note : isoform 2 precursor is encoded by transcript variant 3; growth hormone receptor/binding protein product : growth hormone receptor isoform 2 precursor protein_id : NP_001041612.1

name	Ghr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520605 GeneID:14600 MGI:95708
definition	GO_component : GO:0019898 - extrinsic to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 note : isoform 2 precursor is encoded by transcript variant 2; growth hormone receptor/binding protein product : growth hormone receptor isoform 2 precursor protein_id : NP_001041643.1

name	Fbxo4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859771 CCDS:CCDS27359.1 GeneID:106052 MGI:2146220
definition	GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0031398 - positive regulation of protein ubiquitination [Evidence ISS]; GO:0000209 - protein polyubiquitination [Evidence ISS]; GO:0000723 - telomere maintenance [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence ISS] codon_start : 1 exception : mismatches in translation product : F-box only protein 4 protein_id : NP_598860.1

name	AW549877 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52630434 CCDS:CCDS27360.1 GeneID:106064 MGI:2146232
definition	codon_start : 1 product : hypothetical protein LOC106064 protein_id : NP_666042.2

name	LOC100039196 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266364 GeneID:100039196
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472483.1

name	Oxct1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18266680 CCDS:CCDS27361.1 GeneID:67041 MGI:1914291
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 note : succinyl-CoA:3-ketoacid CoA transferase product : 3-oxoacid CoA transferase 1 protein_id : NP_077150.1

name	LOC666163 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666163
definition	number : 1 pseudo : _no_value

name	LOC666163 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666163
definition	number : 2 pseudo : _no_value

name	LOC666163 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666163
definition	number : 3 pseudo : _no_value

name	LOC666163 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666163
definition	number : 4 pseudo : _no_value

name	LOC223278 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:223278
definition	number : 1 pseudo : _no_value

name	LOC674207 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266359 GeneID:674207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to COX11 homolog, cytochrome c oxidase assembly protein (yeast) pseudo : _no_value transcript_id : XR_030617.1

name	EG666167 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149266360 GeneID:666167 MGI:3643213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 8 Proteins product : predicted gene, EG666167 pseudo : _no_value transcript_id : XR_035649.1

clone name	MSMg01-490L03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-146I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-130C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119D22
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-254C16.b	B6Ng01-254C16.g
ACC	GA060707	GA060708
length	440	1,136
definition	B6Ng01-254C16.b	B6Ng01-254C16.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(3,121,677 - 3,122,122)	(3,260,169 - 3,261,306)
sequence	tagagttattgaccaacaaagcaggtatttatttttgcctttgaagaacc tctgctagcccttttgtctctccccttaacagctttatccaccagcaagt tgctcttcagttggccaaatatctggtctgcaggtgagagaggttagcag gtctcaggaggaacagctagagagcaccaccccatggagtcctaacctag gaagacctgcaggcctagcctctaccttgttttacagtgttgttttctac tgctccctgcaagccttcattttagaaacagaaaccaactgacaactgtc taaaactcctgtcaaatgtttcatttcctttatgcttaaaactgttattt acaggaaggagctttggggtggtgctgcagactgaaagataagatgagga agaggaggaggaggcagatgaggtggaggtggaggtggtg	gaattcttgagcccttcgaaggttcctgtgaaaattggagacaacttcct tcaaattcctatcaattttgcattaattgcaaaattatgccattaatcca tgaatcataaatgttaattgagtctgattacgagtgctttcctgaaggtt ctcagtttacattgcccactttgaccagaggaatcttatctatggctact atctcttgctttctaaaatatatttcttaaacaataaaagtcaaagttgg aaatcactgaaattaaaagagagtggatatgtggtggtggaataatataa atacagtactcatgcatgaaatcctcaaaaacggctataggaaaacataa ggaatatatgttaagatattgagattggttagaactttctgaatagaact tcaaaacccaggaattagccccatgtaccaagtgatgaaactacacaaaa tttaaaagtttttcaataggaggcaagaaaggcaattgtgtccttacaag ccctggctgctcttccagaagacccacaatggatacccagcacccatgtg tcagttaacaactgtgtgttaccacaggtccagggaatctaatgcctggg acctactgggactctgtgggcactgaacacacatggtgcacagacataca tatgagcaaaatatccacacacacacacacacacacacacacacacacac acacacacacacacacacaaatctttctttaaagtttctgcaccacagca aaatatttaaaaaaaaaattctggttaacaattctcaacagtgagcttaa aatatttaataaaccatgttgtaaacacatgtagcatctacagtttactg ttccatttataaactaaaataaaaaaagtgcaaatttagtatgattctaa aagaaccttcataatactaaataaattattggctagaatttgaaacaaca agctacattgcctctaacagtcattgttgccttttgatgctgtgaaggta gacactgatttccttttcagtagctattggaggcctgagttttgtctttt ctgaatagagcagttttgtgtacatttaatatgccactcatataccggct atcttggattcttcaatgctgcctagttctgtgctc
quality values	Open. Hide. 62 59 59 62 62 62 62 43 59 62 54 62 62 43 32 62 49 59 62 62 62 62 59 62 62 34 34 38 28 28 25 46 59 54 54 62 54 62 62 62 62 54 62 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 59 62 62 62 62 62 54 62 62 54 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 59 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 54 47 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 39 54 47 30 24 54 49 58 58 54 58 58 58 58 58 58 58 52 58 46 15 31 38 52 54 39 19 12	Open. Hide. 46 36 39 47 62 62 62 62 62 62 56 30 35 35 21 22 21 11 28 28 36 62 59 59 62 62 62 62 62 59 46 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 51 51 31 33 43 30 48 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 59 62 62 59 62 62 62 56 56 54 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 51 62 62 49 49 56 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 42 49 42 62 62 52 62 49 62 62 62 62 54 62 54 54 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 52 54 54 58 54 54 52 58 58 58 58 58 58 58 58 44 41 52 54 58 52 58 52 58 58 54 58 58 47 58 58 58 58 42 39 52 36 41 58 58 58 58 58 54 58 58 58 42 25 58 54 54 58 54 58 54 52 54 37 54 58 54 58 49 58 58 54 49 35 32 58 58 58 39 40 46 50 53 53 50 51 58 58 50 58 51 48 50 51 51 58 52 46 46 42 54 49 58 41 58 50 58 33 58 42 49 54 37 46 46 53 53 41 21 21 10 10 9 16 50 39 39 48 50 52 46 58 50 49 46 49 50 49 50 49 50 51 50 54 50 51 50 50 50 50 50 48 50 58 39 52 32 30 30 50 52 53 39 39 41 50 50 53 50 52 32 51 41 46 53 58 39 51 49 53 49 29 31 44 33 32 29 50 40 52 53 39 39 24 33 50 32 37 36 32 50 19 52 54 26 19 19 28 49 35 37 54 54 54 54 50 42 44 44 40 22 44 37 39 49 51 34 28 34 38 36 38 33 39 35 37 42 37 24 46 33 42 40 40 42 41 23 23 21 14 11 24 21 51 40 37 32 54 35 32 31 17 17 54 19 20 31 26 32 35 23 34 52 25 31 40 33 32 24 32 22 33 42 25 31 18 21 28 40 32 24 29 29 9 32 20 52 32 28 27 20 31 18 15 16 16 8 12 32 32 14 27 18 51 28 12 21 29 51 45 28 12 18 51 45 40 40 40 30 23 34 37 33 26 45 24 15 48 42 24 23 16 18 19 26 34 28 38 29 27 13 46 46 29 6 31 22 21 31 30 33 31 26 12 25 11 26 20 25 16 32 31 29 19 26 46 10 10 5 7 29 22 33 19 16 19 10 4 19 25 11 46 9 31 30 48 10 18 7 44 25 14 15 35 25 31 32 23 25 25 21 24 29 17 16 20 23 38 18 13 22 11 18 24 9 6 11 13 22 27 27 24 31 24 48 48 33 34 33 6 9 21 12 22 14 13 9 12 13 19 4 4 14 22 7 5 8 19 28 21 8 31 11 30 10 28 37 33 20 19 4 4 4 24 9 23 30 8 6 30 14 25 13 10 10 23 26 24 17 18 5 24 30 38 7 8 18 21 28 38 34 15 19 26 20 30 12 13 9 6 13 16 15 12 5 3 5 6 13 9 4 5 5 10 10 16 30 30 12 9 15 4 5 3 5 21 7 4 3 3 4 6 9 15 13 10 16 5 17 12 7 11 12 7 11 7 4 7 9 2 4 4 6 5 6 2 3 3 6 13 5 2 5 8 15 6 21 6 2 5 10 8 20 5 8 9 8 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_3121677_3122122
seq2: B6Ng01-254C16.b_45_490

seq1  GAATTCTAGAGTTATTGACCAACAAAGCAGGTATTTATTTTTGCCTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAGTTATTGACCAACAAAGCAGGTATTTATTTTTGCCTTTGA  50

seq1  AGAACCTCTGCTAGCCCTTTTGTCTCTCCCCTTAACAGCTTTATCCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTCTGCTAGCCCTTTTGTCTCTCCCCTTAACAGCTTTATCCACCA  100

seq1  GCAAGTTGCTCTTCAGTTGGCCAAATATCTGGTCTGCAGGTGAGAGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTGCTCTTCAGTTGGCCAAATATCTGGTCTGCAGGTGAGAGAGGT  150

seq1  TAGCAGGTCTCAGGAGGAACAGCTAGAGAGCACCACCCCATGGAGTCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGTCTCAGGAGGAACAGCTAGAGAGCACCACCCCATGGAGTCCTA  200

seq1  ACCTAGGAAGACCTGCAGGCCTAGCCTCTACCTTGTTTTACAGTGTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGAAGACCTGCAGGCCTAGCCTCTACCTTGTTTTACAGTGTTGTT  250

seq1  TTCTACTGCTCCCTGCAAGCCTTCATTTTAGAAACAGAAACCAACTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGCTCCCTGCAAGCCTTCATTTTAGAAACAGAAACCAACTGACA  300

seq1  ACTGTCTAAAACTCCTGTCAAATGTTTCATTTCCTTTATGCTTAAAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTAAAACTCCTGTCAAATGTTTCATTTCCTTTATGCTTAAAACTG  350

seq1  TTATTTACAGGAAGGAGCTTTGGGGTGGTGCTGCAGACTGAAAGATAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACAGGAAGGAGCTTTGGGGTGGTGCTGCAGACTGAAAGATAAGA  400

seq1  TGAGGAAGAGGAGGAGGAGGCAGATGAGGTGGAGGTGGAGGTGGTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAGAGGAGGAGGAGGCAGATGAGGTGGAGGTGGAGGTGGTG  446

seq1: chr15_3260169_3261306
seq2: B6Ng01-254C16.g_70_1205 (reverse)

seq1  GAGCACAGAAACTAGGCAAGCCATTTAGAAG-ATCCCAGATAGCC-GTAT  48
      |||||||| |||||||||   ||||  |||| |||| |||||||| ||||
seq2  GAGCACAG-AACTAGGCA--GCATT--GAAGAATCCAAGATAGCCGGTAT  45

seq1  ATGAAGGTGGCTATATTAAATGTACACAAGACTGCTCTATTCAGAAAAGA  98
      ||||  ||||| ||||||||||||||||| ||||||||||||||||||||
seq2  ATGA--GTGGC-ATATTAAATGTACACAAAACTGCTCTATTCAGAAAAGA  92

seq1  CAAAACTCAGGCCTCCAATAGCTACTGAAAAGG-AATCAGTGTCTACCTT  147
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAAAACTCAGGCCTCCAATAGCTACTGAAAAGGAAATCAGTGTCTACCTT  142

seq1  CACAGCATCAAAAGGCAAC-ATGACTGTTAGAGGCAATGTAGCTTGTTGT  196
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CACAGCATCAAAAGGCAACAATGACTGTTAGAGGCAATGTAGCTTGTTGT  192

seq1  TTC-AATTCTAAGCCAAT-ATTTATTTAGTATTATGAAGGTTCTTTTAGA  244
      ||| |||||| ||||||| |||||||||||||||||||||||||||||||
seq2  TTCAAATTCT-AGCCAATAATTTATTTAGTATTATGAAGGTTCTTTTAGA  241

seq1  ATCATACTAAATTTGCAC-TTTTTTATTTTAGTTTATAAATGGAACAGTA  293
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATCATACTAAATTTGCACTTTTTTTATTTTAGTTTATAAATGGAACAGTA  291

seq1  AACTGTAGATGCTACATGTGTTTACAACATGGTTTATTAAATATTTTAAG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAGATGCTACATGTGTTTACAACATGGTTTATTAAATATTTTAAG  341

seq1  CTCACTGTTGAGAATTGTTAACCAGAATTTTTTTTTTAAATATTTTGCTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTTGAGAATTGTTAACCAGAATTTTTTTTTTAAATATTTTGCTG  391

seq1  TGGTGCAGAAACTTTAAAGAAAGATTTGTGTGTGTGTGTGTGTGTGTGTG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAGAAACTTTAAAGAAAGATTTGTGTGTGTGTGTGTGTGTGTGTG  441

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGATATTTTGCTCATATGTAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGATATTTTGCTCATATGTAT  491

seq1  GTCTGTGCACCATGTGTGTTCAGTGCCCACAGAGTCCCAGTAGGTCCCAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGCACCATGTGTGTTCAGTGCCCACAGAGTCCCAGTAGGTCCCAG  541

seq1  GCATTAGATTCCCTGGACCTGTGGTAACACACAGTTGTTAACTGACACAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGATTCCCTGGACCTGTGGTAACACACAGTTGTTAACTGACACAT  591

seq1  GGGTGCTGGGTATCCATTGTGGGTCTTCTGGAAGAGCAGCCAGGGCTTGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGGGTATCCATTGTGGGTCTTCTGGAAGAGCAGCCAGGGCTTGT  641

seq1  AAGGACACAATTGCCTTTCTTGCCTCCTATTGAAAAACTTTTAAATTTTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACACAATTGCCTTTCTTGCCTCCTATTGAAAAACTTTTAAATTTTG  691

seq1  TGTAGTTTCATCACTTGGTACATGGGGCTAATTCCTGGGTTTTGAAGTTC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTCATCACTTGGTACATGGGGCTAATTCCTGGGTTTTGAAGTTC  741

seq1  TATTCAGAAAGTTCTAACCAATCTCAATATCTTAACATATATTCCTTATG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAAAGTTCTAACCAATCTCAATATCTTAACATATATTCCTTATG  791

seq1  TTTTCCTATAGCCGTTTTTGAGGATTTCATGCATGAGTACTGTATTTATA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTATAGCCGTTTTTGAGGATTTCATGCATGAGTACTGTATTTATA  841

seq1  TTATTCCACCACCACATATCCACTCTCTTTTAATTTCAGTGATTTCCAAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCACCACCACATATCCACTCTCTTTTAATTTCAGTGATTTCCAAC  891

seq1  TTTGACTTTTATTGTTTAAGAAATATATTTTAGAAAGCAAGAGATAGTAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTTTTATTGTTTAAGAAATATATTTTAGAAAGCAAGAGATAGTAG  941

seq1  CCATAGATAAGATTCCTCTGGTCAAAGTGGGCAATGTAAACTGAGAACCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGATAAGATTCCTCTGGTCAAAGTGGGCAATGTAAACTGAGAACCT  991

seq1  TCAGGAAAGCACTCGTAATCAGACTCAATTAACATTTATGATTCATGGAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAGCACTCGTAATCAGACTCAATTAACATTTATGATTCATGGAT  1041

seq1  TAATGGCATAATTTTGCAATTAATGCAAAATTGATAGGAATTTGAAGGAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCATAATTTTGCAATTAATGCAAAATTGATAGGAATTTGAAGGAA  1091

seq1  GTTGTCTCCAATTTTCACAGGAACCTTCGAAGGGCTCAAGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTCCAATTTTCACAGGAACCTTCGAAGGGCTCAAGAATTC  1136

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information