BAC Information

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BAC

Clone NameB6Ng01-255J22
Chromosome15 (Build37)
Map Location 46,515,396 - 46,516,450
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039389, EG432951
Downstream geneLOC100039438, LOC665130, LOC100039485, LOC100039493, Csmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255J22.bB6Ng01-255J22.g
ACCGA061784GA061785
length1,1531,178
definitionB6Ng01-255J22.b B6Ng01-255J22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacggctacagatacatatgtagcagaggattgccttgtctggca
ccaataggaagggaggcctttggtcctgtgttggtttgacgccccagtgt
agggggatgttggaactgtggggcaggagaaggtgtatcagtgagggagc
aacctcctagcagcaaaggggagtggggaaaagcagatgtgggatagggg
ctttgtggaggattgaccaggaattgggatttcatttgagatgtaaacaa
atggaattattaataaaataaataataaataaataaataaatattgcgtc
ccgctcgaccggcaagaaagacgcaacaaaccagaatcttccgtgggaag
atcccgaaccgggaaaatggcgctgcttttataaccctcagtgtgatgtt
tcagcacctgatatggcgtgacagctcccgattcgttgcttgcccatcac
cccactattacaccccgagaatgggagtgactaggagtgaattcactctc
gcacctgcgtacaaggctagtttactagataggcacagcggaggccagcg
ccatcttataatggtgattgctcgcggcacacacggctctcctcagagat
taccggctctccacaaataaatacatatttaatgatatttttttctctac
ttaaagttactgctcatgttttcttttgtttttgtttgtttgtttgtttt
gtttttaaaacctgggataattaccatctttgtatagtgactgtgataca
gcaaacataggtatgctcaaattttttagtacctccgagttattactgaa
aagagtctaaattttattattatcataatgaaaataacttgacaatagat
tgtgaagccaaataattcttattattaatgcccatctctaatctaagcac
attatcccctcattatatatttacctttggatccttaatttcctttaata
tctatttcaatttagaattaactaaatttacttaccataccaatatttac
gaacttctgtttgttactttggtctgtaatctcttgatttgttcaaatct
cattttttctctaaattcaaattatcagctattgagctgacctcttcctc
tacttataggtagatctacgtcatactttacttctattaccttagcaaat
gtc

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggcttagatcaaaaattcaggtgacag
cagatgctggtaaggatgtagagaaagaggaatactcctccattgttggt
gggattgcagacttgtacaaccactctggaaatcagtctggtggttcctc
agaaaattggacatagtactactggaggatccagcaatacctctcctggg
catatatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagatgaatggataaagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcattctgagtgaggtaacacatttacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaacac
ctaggatactcaagatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgaccctccttagaactggga
acaaaacacccatgggaggagttacagagacaaagtttggagctgagaca
aaaggatggaccatctagagactgccatatccagggatccaccccataat
cagcttccaaacgctgacatcattgcatacactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccgggacttagcaga
aaacagaagtggatgctcatagtcagatattggatggatcacagggctcc
caatggagagctagagaagtacccagagctatagggaactgcaaccctat
agtgaacacatatgactaccagtacccgggcgcctctgactctagctgca
tattgttttcaaaagatgctagtccgtcatcactgaaaaaggagtcccat
gacacgcaactgtataatgctctagtcaggactcaggtcaaaagtgggat
ggtgggtaccgaaaagtggggcggcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_46515396_46516450
seq2: B6Ng01-255J22.b_153_1198

seq1  TGTTGGAACTGTGGGGCAGGAGAAGGTGTATCAGTGAGGGAGCAACCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAACTGTGGGGCAGGAGAAGGTGTATCAGTGAGGGAGCAACCTCC  50

seq1  TAGCAGCAAAGGGGAGTGGGGAAAAGCAGATGTGGGATAGGGGCTTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCAAAGGGGAGTGGGGAAAAGCAGATGTGGGATAGGGGCTTTGTG  100

seq1  GAGGATTGACCAGGAATTGGGATTTCATTTGAGATGTAAACAAATGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTGACCAGGAATTGGGATTTCATTTGAGATGTAAACAAATGGAAT  150

seq1  TATTAATAAAATAAATAATAAATAAATAAATAAATATTGCGTCCCGCTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATAAAATAAATAATAAATAAATAAATAAATATTGCGTCCCGCTCG  200

seq1  ACCGGCAAGAAAGACGCAACAAACCAGAATCTTCCGTGGGAAGATCCCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGCAAGAAAGACGCAACAAACCAGAATCTTCCGTGGGAAGATCCCGA  250

seq1  ACCGGGAAAATGGCGCTGCTTTTATAACCCTCAGTGTGATGTTTCAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGGAAAATGGCGCTGCTTTTATAACCCTCAGTGTGATGTTTCAGCAC  300

seq1  CTGATATGGCGTGACAGCTCCCGATTCGTTGCTTGCCCATCACCCCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATGGCGTGACAGCTCCCGATTCGTTGCTTGCCCATCACCCCACTA  350

seq1  TTACACCCCGAGAATGGGAGTGACTAGGAGTGAATTCACTCTCGCACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCCCGAGAATGGGAGTGACTAGGAGTGAATTCACTCTCGCACCTG  400

seq1  CGTACAAGGCTAGTTTACTAGATAGGCACAGCGGAGGCCAGCGCCATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACAAGGCTAGTTTACTAGATAGGCACAGCGGAGGCCAGCGCCATCTT  450

seq1  ATAATGGTGATTGCTCGCGGCACACACGGCTCTCCTCAGAGATTACCGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGTGATTGCTCGCGGCACACACGGCTCTCCTCAGAGATTACCGGC  500

seq1  TCTCCACAAATAAATACATATTTAATGATATTTTTTTCTCTACTTAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACAAATAAATACATATTTAATGATATTTTTTTCTCTACTTAAAGT  550

seq1  TACTGCTCATGTTTTCTTTTGTTTTTGTTTGTTTGTTTGTTTTGTTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTCATGTTTTCTTTTGTTTTTGTTTGTTTGTTTGTTTTGTTTTTA  600

seq1  AAACCTGGGATAATTACCATC-TTGTATAGTGACTGTGATACAGCAAACA  649
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAACCTGGGATAATTACCATCTTTGTATAGTGACTGTGATACAGCAAACA  650

seq1  TAGGTATGCTCAAATTTTTTAGTACCTCCGAGTTATTACTGAAAAGAGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATGCTCAAATTTTTTAGTACCTCCGAGTTATTACTGAAAAGAGTC  700

seq1  TAAATTTTATTATTATCATAATGAAAATAACTTGACAATAGATTGTGAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTATTATTATCATAATGAAAATAACTTGACAATAGATTGTGAAG  750

seq1  CCAAATAATTCTTATTATTAATGCCCATCTCTAATCTAAGCACATTATCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAATTCTTATTATTAATGCCCATCTCTAATCTAAGCACATTATCC  800

seq1  CCTCATTATATATTTACCTTTGTATCCTTAATTTCCTTTAATATCTATTT  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCTCATTATATATTTACCTTTGGATCCTTAATTTCCTTTAATATCTATTT  850

seq1  CAATTTAGAATTAACTAAATTTTACTTACCATACCAATAATTTACGAACT  899
      ||||||||||||||||||| |||||||||||||||||| |||||||||||
seq2  CAATTTAGAATTAACTAAA-TTTACTTACCATACCAAT-ATTTACGAACT  898

seq1  TCTGTTTGTTACTTT-GTCTGTAATCTCTTGAATTTGTTCAAAATTCTCA  948
      ||||||||||||||| ||||||||||||||| |||||||||||  |||||
seq2  TCTGTTTGTTACTTTGGTCTGTAATCTCTTG-ATTTGTTCAAA--TCTCA  945

seq1  TTTTTTCTCTAAAATCCAAATTAATTCAGCTA-TGAGCTGACCTCTTCTC  997
      |||||||||| |||| |||||||  ||||||| |||||||||||||||  
seq2  TTTTTTCTCT-AAATTCAAATTA--TCAGCTATTGAGCTGACCTCTTCCT  992

seq1  TTACTTATAGGTAGATTCTACTTAATACTTTTACTTCCTATACTTTTAGC  1047
       |||||||||||||| ||||| | |||| ||||||| ||||    |||||
seq2  CTACTTATAGGTAGA-TCTACGTCATAC-TTTACTT-CTATTACCTTAGC  1039

seq1  AAAATGTC  1055
       |||||||
seq2  -AAATGTC  1046


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