BAC Information

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BAC

Clone NameB6Ng01-256L24
Chromosome15 (Build37)
Map Location 53,596,652 - 53,597,742
singlet/doubletsinglet
Overlap geneSamd12
Upstream geneLOC100039745, Ext1
Downstream geneEG665097, EG621631, Tnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256L24.bB6Ng01-256L24.g
ACCGA062630GA062631
length1,086189
definitionB6Ng01-256L24.b B6Ng01-256L24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatttgttaaagcaaattgcaaatgaccatctccaatgacaca
agcagggcaataaatgtagaaagtgatttaagactaggtgcgtataatgt
cagcctttcgatttacgaatctaaatggtaggtttcttcataaaaagtgc
atgttaatgcaaaagagcgtctccttaaaatgtcaagtgcagtgaattac
taagatgtttcttatggtttgggttttaacctcaaacactccctgttatt
gtcttgattgttacaaagaggaggtatgctttccaaagtgattattactt
tattaaataattttggcttaatgctcttctacatcttccatgtgtctcca
ataatttattcatgagcctcatcatattctgcataaagctagcatgatta
tatttgcacctgaaatttctttagattgagatggatggcaaagatcagat
actttaaaaatactttgctgcactgccctctaattgccaattttactgaa
tgtaaaaatgtagttattttttctcccttgtggctttcctgggaataata
ctcaaaatgccaaatcaaaaccctactcagtgcagggcaggtagttcctt
cttctacctcttctggggatgtaagtgtcaaaatgcccttgttaaagggg
attgaagtaagttctgtgggcattcagaattactgatccttgtacagctt
taaagagagcaataaaacatatttataatattttccttccctttgatctg
gaaggcacttagtaaaaatttccattgtagtttttagggtaaatgagtca
aagcaagttaaaatatattttctttgaaaggcacctattgtcctggtgat
aggattaaaaagaaaaaagaaaaacctattgttgcatgcttttggagttt
aggtgactgcgtgtccaactagctacattaaaagggttattttcttgtgt
gcaattatatactcctgtacctagtgaattcaaaacatacttcaatcatc
attggggggtaaggagtacaataaaaagtatagttatttaacaaatgact
tagtactttttgtgggggcaaaaatgctatatgtaa

aagaagtttaacaacctagagggccaagtgaggatgctcaatctcacttg
ggagggagaacaaagcagaggacagagggagggagggaattgggtgggag
aggagagagggtgggccaagggaacacggacccgtttctggttttagggg
gacgaggattgaaatccttaggattaggagaatgatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_53596652_53597742
seq2: B6Ng01-256L24.b_49_1134 (reverse)

seq1  TTACATATAGGCATTTTTTTCCCCCACAAAAGGTACCTAAGGTCATTTGT  50
      ||||||||| ||| ||||| ||||||||||| ||| |||| |||||||||
seq2  TTACATATA-GCA-TTTTTGCCCCCACAAAAAGTA-CTAA-GTCATTTGT  46

seq1  TAAATAACTATACCTTTTTTATTTGTACTCCTTTCCCCCCAATGATGATT  100
      |||||||||||||  |||||| ||||||||||| ||||||||||||||||
seq2  TAAATAACTATAC--TTTTTA-TTGTACTCCTTACCCCCCAATGATGATT  93

seq1  GGAGTATGTTTTGAATTCACTAGGTACAGGAGTATATAATTGCACACAAG  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATGTTTTGAATTCACTAGGTACAGGAGTATATAATTGCACACAAG  143

seq1  -AAATAACCC-TTTAATGTAGCTAGTTGGACACGCAGTCACCTAAACTCC  198
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACCCTTTTAATGTAGCTAGTTGGACACGCAGTCACCTAAACTCC  193

seq1  AAAAGCATGCAACAATAGGTTTTTCTTTTTTCTTTTTAATCCTATCACCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATGCAACAATAGGTTTTTCTTTTTTCTTTTTAATCCTATCACCA  243

seq1  GGACAATAGGTGCCTTTCAAAGAAAATATATTTTAACTTGCTTTGACTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATAGGTGCCTTTCAAAGAAAATATATTTTAACTTGCTTTGACTCA  293

seq1  TTTACCCTAAAAACTACAATGGAAATTTTTACTAAGTGCCTTCCAGATCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCTAAAAACTACAATGGAAATTTTTACTAAGTGCCTTCCAGATCA  343

seq1  AAGGGAAGGAAAATATTATAAATATGTTTTATTGCTCTCTTTAAAGCTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGGAAAATATTATAAATATGTTTTATTGCTCTCTTTAAAGCTGT  393

seq1  ACAAGGATCAGTAATTCTGAATGCCCACAGAACTTACTTCAATCCCCTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGATCAGTAATTCTGAATGCCCACAGAACTTACTTCAATCCCCTTT  443

seq1  AACAAGGGCATTTTGACACTTACATCCCCAGAAGAGGTAGAAGAAGGAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGGCATTTTGACACTTACATCCCCAGAAGAGGTAGAAGAAGGAAC  493

seq1  TACCTGCCCTGCACTGAGTAGGGTTTTGATTTGGCATTTTGAGTATTATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCCCTGCACTGAGTAGGGTTTTGATTTGGCATTTTGAGTATTATT  543

seq1  CCCAGGAAAGCCACAAGGGAGAAAAAATAACTACATTTTTACATTCAGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAAAGCCACAAGGGAGAAAAAATAACTACATTTTTACATTCAGTA  593

seq1  AAATTGGCAATTAGAGGGCAGTGCAGCAAAGTATTTTTAAAGTATCTGAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGCAATTAGAGGGCAGTGCAGCAAAGTATTTTTAAAGTATCTGAT  643

seq1  CTTTGCCATCCATCTCAATCTAAAGAAATTTCAGGTGCAAATATAATCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCATCCATCTCAATCTAAAGAAATTTCAGGTGCAAATATAATCAT  693

seq1  GCTAGCTTTATGCAGAATATGATGAGGCTCATGAATAAATTATTGGAGAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTTTATGCAGAATATGATGAGGCTCATGAATAAATTATTGGAGAC  743

seq1  ACATGGAAGATGTAGAAGAGCATTAAGCCAAAATTATTTAATAAAGTAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAAGATGTAGAAGAGCATTAAGCCAAAATTATTTAATAAAGTAAT  793

seq1  AATCACTTTGGAAAGCATACCTCCTCTTTGTAACAATCAAGACAATAACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTTGGAAAGCATACCTCCTCTTTGTAACAATCAAGACAATAACA  843

seq1  GGGAGTGTTTGAGGTTAAAACCCAAACCATAAGAAACATCTTAGTAATTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGTTTGAGGTTAAAACCCAAACCATAAGAAACATCTTAGTAATTC  893

seq1  ACTGCACTTGACATTTTAAGGAGACGCTCTTTTGCATTAACATGCACTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACTTGACATTTTAAGGAGACGCTCTTTTGCATTAACATGCACTTT  943

seq1  TTATGAAGAAACCTACCATTTAGATTCGTAAATCGAAAGGCTGACATTAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAGAAACCTACCATTTAGATTCGTAAATCGAAAGGCTGACATTAT  993

seq1  ACGCACCTAGTCTTAAATCACTTTCTACATTTATTGCCCTGCTTGTGTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACCTAGTCTTAAATCACTTTCTACATTTATTGCCCTGCTTGTGTCA  1043

seq1  TTGGAGATGGTCATTTGCAATTTGCTTTAACAAATAAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATGGTCATTTGCAATTTGCTTTAACAAATAAGAATTC  1086


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