BAC Information

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BAC

Clone NameB6Ng01-257B14
Chromosome15 (Build37)
Map Location 96,505,773 - 96,656,648
singlet/doubletdoublet
Overlap geneSlc38a2, LOC667941
Upstream geneLOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2, Sfrs2ip, Slc38a1
Downstream geneLOC546651, Slc38a4, Amigo2, BC038822, LOC100043354, LOC100042774, D15Ertd682e, Pp11r, Rapgef3, 4930570C03Rik, Hdac7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257B14.bB6Ng01-257B14.g
ACCGA062883GA062884
length1,031774
definitionB6Ng01-257B14.b B6Ng01-257B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,655,620 - 96,656,648)(96,505,773 - 96,506,546)
sequence
gaattcagtctgtctggactgaacaaatgactgtaacacaggaagctgtg
ggcacaggatcggaaaggggcctgagagtcttcaggtgagagacaagcag
tgtccaccattctctcacctccacagcccagaggagcaaggggtcggagg
ggcgggagggagggcaccgcagaactcggaacctgcagtaccatcttgat
gacagtgaatccccaacagcacagatggtggagactgcaaaattgtgtta
ggagtctgaagctgggagatctctctagcttgtaacacattatacctcca
ctccacccccatgtccacaatgaggggcaagctgtggagtctaggggttg
agaacctacgatgtgtgcgtggtggaacttccagaggcactgaagaaagg
tgaatgtaggtgggtaggcccttcatatgacctcagggtctcaggcaaag
acaaccctacagagaccaaatgatcccacagagccccaaaaatatcaacc
ttgggaatcagacaccagagagtctggcaagaaagtggctgcctgggcct
gcactctcttttgctgtcataaaaacaccacagaaaaaaccaacgtgggc
aggagagggttcgtttggtttacacagtcaatcacagaccaccgttgatg
gaagtcagtgtaggaactcaagcaggagtagaagcagggacctcggagga
gagaaagcggctaactggcctgctcttggattcacgttgagctacactct
gaggacctcctgcccagaggtggcccccgtacaatgggtggggctctccc
atgccaatcactaatcaagaaatgccccatagatttgcctacaggccaat
ctgctggaggagggtcctcgattgaaatttctttcttcccagaggaccca
aacttatgtcaagttgacagaaaaagactaaaagtacagggtcttcacca
caaaacccttctctctggtaggattggatggtttaacatgcttgaatcac
tgaaaactagcaacacttcaccacccatttt
gaattctccttactaagcgttatgctgctgggtggagctggtgcacactt
ttgatcgcagcacttgggaggcagaggcagacggatctctgtgagttcga
ggccagcctggtctacagagtaagttccaggacagccaaagctacacaga
gaaaccctgtcacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccca
accaaccaatcaactaacctaccaaataaaatgaaagatgtggctcttga
acttaaattagtccctaagtaattgctactaaaagggagtgggggggggt
gggaaggcgaaaccaaagggagattggggaaatccgtgaatccctgggga
gaatgatatgatggctgtactttaattcctaaacgagtaaatcatgtaaa
cacgtaacaagcaaaaggaaagataaccagcaggtagcaaacgcacagaa
gcagcaagcgcacagtaaaacctcgtcacgtcggcgcttacgccatctag
cagaaatgcctgggctgttttcctggagttcccacaaggggtttccagaa
agaccagtgttcccttcatagctgttcaccattagctgtttgctttctcc
tttctcccaaacacagccgtggggggcagagtgccccaggacaaggcctc
ggaaacacagatgataaacacgagtctgagatcttgcccttggcgtcagc
tctccacacgggtaaacggcatgtggtatttatccgtactttatattaca
attaaggacaaatgaaaaccctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_96655620_96656648
seq2: B6Ng01-257B14.b_47_1077 (reverse)

seq1  AAAATTGGTGGTG-AGTGTTGCTAG-TCTCAGTGATTCAAGCATGTTAAA  48
      ||||| ||||||| ||||||||||| | ||||||||||||||||||||||
seq2  AAAATGGGTGGTGAAGTGTTGCTAGTTTTCAGTGATTCAAGCATGTTAAA  50

seq1  CCATCCAATCCTACCAGAGAGAAGGGTTTTGTGGTTGAAGACCCTGTACT  98
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCATCCAATCCTACCAGAGAGAAGGGTTTTGTGG-TGAAGACCCTGTACT  99

seq1  TTTAGTCTTTTTCTGTCAACTTGACATAAGTTTGGGTCCTCTGGGAAG-A  147
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTAGTCTTTTTCTGTCAACTTGACATAAGTTTGGGTCCTCTGGGAAGAA  149

seq1  AGGAATTTCAATCGAGGACCCTCCTCCAGCAGATTGGCCTGTAGGCAAAT  197
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTCAATCGAGGACCCTCCTCCAGCAGATTGGCCTGTAGGCAAAT  199

seq1  CTATGGGGCATTTCTTGATTAGTGATTGGCATGGGAGAGCCCCACCCATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGGCATTTCTTGATTAGTGATTGGCATGGGAGAGCCCCACCCATT  249

seq1  GTACGGGGGCCACCTCTGGGCAGGAGGTCCTCAGAGTGTAGCTCAACGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGGGGGCCACCTCTGGGCAGGAGGTCCTCAGAGTGTAGCTCAACGTG  299

seq1  AATCCAAGAGCAGGCCAGTTAGCCGCTTTCTCTCCTCCGAGGTCCCTGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAGAGCAGGCCAGTTAGCCGCTTTCTCTCCTCCGAGGTCCCTGCT  349

seq1  TCTACTCCTGCTTGAGTTCCTACACTGACTTCCATCAACGGTGGTCTGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCCTGCTTGAGTTCCTACACTGACTTCCATCAACGGTGGTCTGTG  399

seq1  ATTGACTGTGTAAACCAAACGAACCCTCTCCTGCCCACGTTGGTTTTTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTGTGTAAACCAAACGAACCCTCTCCTGCCCACGTTGGTTTTTTC  449

seq1  TGTGGTGTTTTTATGACAGCAAAAGAGAGTGCAGGCCCAGGCAGCCACTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTTTTTATGACAGCAAAAGAGAGTGCAGGCCCAGGCAGCCACTT  499

seq1  TCTTGCCAGACTCTCTGGTGTCTGATTCCCAAGGTTGATATTTTTGGGGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCAGACTCTCTGGTGTCTGATTCCCAAGGTTGATATTTTTGGGGC  549

seq1  TCTGTGGGATCATTTGGTCTCTGTAGGGTTGTCTTTGCCTGAGACCCTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGGATCATTTGGTCTCTGTAGGGTTGTCTTTGCCTGAGACCCTGA  599

seq1  GGTCATATGAAGGGCCTACCCACCTACATTCACCTTTCTTCAGTGCCTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATATGAAGGGCCTACCCACCTACATTCACCTTTCTTCAGTGCCTCT  649

seq1  GGAAGTTCCACCACGCACACATCGTAGGTTCTCAACCCCTAGACTCCACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTCCACCACGCACACATCGTAGGTTCTCAACCCCTAGACTCCACA  699

seq1  GCTTGCCCCTCATTGTGGACATGGGGGTGGAGTGGAGGTATAATGTGTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCCCTCATTGTGGACATGGGGGTGGAGTGGAGGTATAATGTGTTA  749

seq1  CAAGCTAGAGAGATCTCCCAGCTTCAGACTCCTAACACAATTTTGCAGTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGAGAGATCTCCCAGCTTCAGACTCCTAACACAATTTTGCAGTC  799

seq1  TCCACCATCTGTGCTGTTGGGGATTCACTGTCATCAAGATGGTACTGCAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCATCTGTGCTGTTGGGGATTCACTGTCATCAAGATGGTACTGCAG  849

seq1  GTTCCGAGTTCTGCGGTGCCCTCCCTCCCGCCCCTCCGACCCCTTGCTCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGAGTTCTGCGGTGCCCTCCCTCCCGCCCCTCCGACCCCTTGCTCC  899

seq1  TCTGGGCTGTGGAGGTGAGAGAATGGTGGACACTGCTTGTCTCTCACCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTGTGGAGGTGAGAGAATGGTGGACACTGCTTGTCTCTCACCTG  949

seq1  AAGACTCTCAGGCCCCTTTCCGATCCTGTGCCCACAGCTTCCTGTGTTAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCTCAGGCCCCTTTCCGATCCTGTGCCCACAGCTTCCTGTGTTAC  999

seq1  AGTCATTTGTTCAGTCCAGACAGACTGAATTC  1029
      ||||||||||||||||||||||||||||||||
seq2  AGTCATTTGTTCAGTCCAGACAGACTGAATTC  1031

seq1: chr15_96505773_96506546
seq2: B6Ng01-257B14.g_67_840

seq1  GAATTCTCCTTACTAAGCGTTATGCTGCTGGGTGGAGCTGGTGCACACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTACTAAGCGTTATGCTGCTGGGTGGAGCTGGTGCACACTT  50

seq1  TTGATCGCAGCACTTGGGAGGCAGAGGCAGACGGATCTCTGTGAGTTCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCGCAGCACTTGGGAGGCAGAGGCAGACGGATCTCTGTGAGTTCGA  100

seq1  GGCCAGCCTGGTCTACAGAGTAAGTTCCAGGACAGCCAAAGCTACACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCTGGTCTACAGAGTAAGTTCCAGGACAGCCAAAGCTACACAGA  150

seq1  GAAACCCTGTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC  200
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  GAAACCCTGTCAC-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC  199

seq1  AACCAACCAATCAACTAACCTACCAAATAAAATGAAAGATGTGGCTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACCAATCAACTAACCTACCAAATAAAATGAAAGATGTGGCTCTTG  249

seq1  AACTTAAATTAGTCCCTAAGTAATTGCTACTAAAAGGGAGTGGGGTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AACTTAAATTAGTCCCTAAGTAATTGCTACTAAAAGGGAGTGGGGGGGGG  299

seq1  TGGGAAGGCGAAACCAAAGGGAGATTGGGGAAATCCGTGAATCCCTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGGCGAAACCAAAGGGAGATTGGGGAAATCCGTGAATCCCTGGGG  349

seq1  AGAATGATATGATGGCTGTACTTTAATTCCTAAACGAGTAAATCATGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGATATGATGGCTGTACTTTAATTCCTAAACGAGTAAATCATGTAA  399

seq1  ACACGTAACAAGCAGAAGGAAAGATAACCAGCAGGTAGCAGACGCACAGA  450
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  ACACGTAACAAGCAAAAGGAAAGATAACCAGCAGGTAGCAAACGCACAGA  449

seq1  AGCAGCAAGCGCACAGTAAAACCTCGTCACGTCGGCGCTTACGCCATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAAGCGCACAGTAAAACCTCGTCACGTCGGCGCTTACGCCATCTA  499

seq1  GCAGAAATGCCTGGGCTGTTTTCCTGGAGTTCCCACAAGGGGTTTCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAATGCCTGGGCTGTTTTCCTGGAGTTCCCACAAGGGGTTTCCAGA  549

seq1  AAGACCAGTGTTCCCTTCATAGCTGTTCACCATTAGCTGTTTGCTTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGTGTTCCCTTCATAGCTGTTCACCATTAGCTGTTTGCTTTCTC  599

seq1  CTTTCTCCCAGACACAGCCGTGGGGGGCAGAGTGCCCCAGGACAAGGCCT  650
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCCAAACACAGCCGTGGGGGGCAGAGTGCCCCAGGACAAGGCCT  649

seq1  CGGAAACACAGAAGATAAACACGAGTCTGAGATCTTGCCCTTGGCGTCAG  700
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CGGAAACACAGATGATAAACACGAGTCTGAGATCTTGCCCTTGGCGTCAG  699

seq1  CTCTCCACACGGGTAAACGGCATGTGGTATTTATCCGTACTTTATATTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACACGGGTAAACGGCATGTGGTATTTATCCGTACTTTATATTAC  749

seq1  AATTAAGGACAAATG-AAACCCTAT  774
      ||||||||||||||| |||||||||
seq2  AATTAAGGACAAATGAAAACCCTAT  774