BAC Information

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BAC

Clone NameB6Ng01-257J12
Chromosome15 (Build37)
Map Location 54,332,232 - 54,333,357
singlet/doubletsinglet
Overlap genenone
Upstream geneSamd12, EG665097, EG621631, Tnfrsf11b, LOC665280, EG383032, Colec10
Downstream geneMal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6, Col14a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257J12.bB6Ng01-257J12.g
ACCGA063253GA063254
length1,1201,165
definitionB6Ng01-257J12.b B6Ng01-257J12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagctactaatccagtgccatgactgcctgcctggtgccatgc
ttcatgcctcagtggtcatgcactccaactctctgaacccatgagcccca
aattaaacactttcctttacaacttgtcttacttgtggtattttatcaca
gcaattgaaaagttctaaggcatgtgccattcctatttcccattggcctc
tttgctctacattttcataatcttcttcactggttgctgaaggcaacaca
atacatttctttaacagtttctccttttacagttctcaattatgtgtata
tgtatatgttacatacatgtgtgcacatgtgtatctttctctgtcattct
acctgactgcttaagacagagtctctcactgatcataaggctcactgttc
caatcagaaaggctgaccagaaggggaatctgcctattatcctgccctag
cactagctttacagccacccaatgccatgaccaactcgtgttcatatact
ttggttactttggttccaaactcagatcctcatgctggcatcccaagcac
tttatccattgacctcctcagatctctatttctcttttcattaatagttc
agccttttacatttattgtaaagactatgaaatatgattttatttattct
cgtgttattatgacataagttttattcctgtgtattccatgaatgcaaca
tccattgctttattattttaaacagcttattgtttttagagaactgggga
gaaataatgttttattcatcaaaatgattgcatatgagcgatcatgcaga
aaatagttaccatttaggaaaaggcaaatctcttcaactcaagtgaactc
cgaaagcatgttggcagccaagaattctctactagtaattcattcagaag
agaggtattaaactttttattcttcaaaggtctacatcataatgtctgtc
acaagtatccaataataacagagaaaactggaaggctttattatcagttt
cagtgaagtggccctttagattcttagcaaagggatttggctactgacca
tatacatatatatatatacaatacacatatctataaactttcatacttac
tttatggtgttgtaaatcaa
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagca
gatgctggcgtggatgtggagaaagaggaacactcctccattgttggtgg
gagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaactggccatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgccccaacaggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagatagaagctggaaagaacctagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatactgagtgaggtaacacattcacaaag
aaactcacacaatatgtattcactgataagtggatattagccccaaacct
acgatacccaagatataagatataatttgctaaacacatgaaactcaaga
tgaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatctaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gactcagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggagcagctagagaaagtagccaagagctaaagggatctgcaccctata
ggtgacacattatgactaaccagtaccccggaggctctgactctagctgc
attatattatcaaagatgctagtcgtcatcactggtaagagagctcaatg
gacctgccaacttatatgccagtcagtaccagcaaaggcaatggatgtca
gtatgtgggctgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_54332232_54333357
seq2: B6Ng01-257J12.b_45_1164

seq1  GAATTCTCAGCTACTAATCCAGTGCCATGACTGCCTGCCTGGTGCCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTACTAATCCAGTGCCATGACTGCCTGCCTGGTGCCATGC  50

seq1  TTCATGCCTCAGTGGTCATGCACTCCAACTCTCTGAACCCATGAGCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCCTCAGTGGTCATGCACTCCAACTCTCTGAACCCATGAGCCCCA  100

seq1  AATTAAACACTTTCCTTTACAACTTGTCTTACTTGTGGTATTTTATCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAACACTTTCCTTTACAACTTGTCTTACTTGTGGTATTTTATCACA  150

seq1  GCAATTGAAAAGTTCTAAGGCATGTGCCATTCCTATTTCCCATTGGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTGAAAAGTTCTAAGGCATGTGCCATTCCTATTTCCCATTGGCCTC  200

seq1  TTTGCTCTACATTTTCATAATCTTCTTCACTGGTTGCTGAAGGCAACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTACATTTTCATAATCTTCTTCACTGGTTGCTGAAGGCAACACA  250

seq1  ATACATTTCTTTAACAGTTTCTCCTTTTACAGTTCTCAATTATGTGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTCTTTAACAGTTTCTCCTTTTACAGTTCTCAATTATGTGTATA  300

seq1  TGTATATGTTACATACATGTGTGCACATGTGTATCTTTCTCTGTCATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGTTACATACATGTGTGCACATGTGTATCTTTCTCTGTCATTCT  350

seq1  ACCTGACTGCTTAAGACAGAGTCTCTCACTGATCATAAGGCTCACTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACTGCTTAAGACAGAGTCTCTCACTGATCATAAGGCTCACTGTTC  400

seq1  CAATCAGAAAGGCTGACCAGAAGGGGAATCTGCCTATTATCCTGCCCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGAAAGGCTGACCAGAAGGGGAATCTGCCTATTATCCTGCCCTAG  450

seq1  CACTAGCTTTACAGCCACCCAATGCCATGACCAACTCGTGTTCATATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCTTTACAGCCACCCAATGCCATGACCAACTCGTGTTCATATACT  500

seq1  TTGGTTACTTTGGTTCCAAACTCAGATCCTCATGCTGGCATCCCAAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTACTTTGGTTCCAAACTCAGATCCTCATGCTGGCATCCCAAGCAC  550

seq1  TTTATCCATTGACCTCCTCAGATCTCTATTTCTCTTTTCATTAATAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCATTGACCTCCTCAGATCTCTATTTCTCTTTTCATTAATAGTTC  600

seq1  AGCCTTTTACATTTATTGTAAAGACTATGAAATATGATTTTATTTATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTTACATTTATTGTAAAGACTATGAAATATGATTTTATTTATTCT  650

seq1  CGTGTTATTATGACATAAGTTTTATTCCTGTGTATTCCATGAATGCAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTATTATGACATAAGTTTTATTCCTGTGTATTCCATGAATGCAACA  700

seq1  TCCATTGCTTTATTATTTTAAACAGCTTATTGTTTTTAGAGAACTGGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGCTTTATTATTTTAAACAGCTTATTGTTTTTAGAGAACTGGGGA  750

seq1  GAAATAATGTTTTATTCATCAAAATGATTGCATATGAGCGATCATGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATGTTTTATTCATCAAAATGATTGCATATGAGCGATCATGCAGA  800

seq1  AAATAGTTACCATTTAGGAAAAGGCAAATCTCTTCAACTCAAGTGAACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTACCATTTAGGAAAAGGCAAATCTCTTCAACTCAAGTGAACTC  850

seq1  CGAAAGCATGTTGGCAGCCAAGAATTCTCTACTAGTAATTCATTCAGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAGCATGTTGGCAGCCAAGAATTCTCTACTAGTAATTCATTCAGAAG  900

seq1  AGAGGTATTAAACTTTTTATTCTTCAAAGGTCTACATCATAATGTCTGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATTAAACTTTTTATTCTTCAAAGGTCTACATCATAATGTCTGTC  950

seq1  ACAAGTATCCAATAATAACAGAGAAAACTGGAAGGCTTTATTATCAGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTATCCAATAATAACAGAGAAAACTGGAAGGCTTTATTATCAGTTT  1000

seq1  CAGTGAAGTGG-CCTTTAGAATCTTAGCAAAAGGATTTTGGCTACTGACC  1049
      ||||||||||| |||||||| |||||||||| ||| ||||||||||||||
seq2  CAGTGAAGTGGCCCTTTAGATTCTTAGCAAAGGGA-TTTGGCTACTGACC  1049

seq1  ATATACATATAATTATATATACAAATACACATAATCTATAAACTTTCATA  1099
      |||||||||||  ||||||||| ||||||||| |||||||||||||||||
seq2  ATATACATATA--TATATATAC-AATACACAT-ATCTATAAACTTTCATA  1095

seq1  CTTTACTTTAT-GTGTTGTTAAAATCAA  1126
      | ||||||||| |||||||  |||||||
seq2  C-TTACTTTATGGTGTTGT--AAATCAA  1120