BAC Information

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BAC

Clone NameB6Ng01-257P20
Chromosome15 (Build37)
Map Location 87,450,700 - 87,451,784
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042309
Downstream geneAW049604, LOC100042329, LOC100042340, Zdhhc25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257P20.bB6Ng01-257P20.g
ACCGA063546GA063547
length1,2071,117
definitionB6Ng01-257P20.b B6Ng01-257P20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatttgcaagtgttgtattaagaatgtttgctgtgcagtggtgg
tgcacatctttaatcttagcactcagggggcagaggcaggtggatctctg
agtttgatgccagcctggtctactgagaaagttccaagacagtcaaggct
acacagaaaaatcctgtctctctgttcttccacaggacttgggtttaatt
aatacccaacacctacataacagctcacaactctatataagtcctgctcc
aggggatccagcgccctcacacatatattcacacagggaaaaacacccat
tcacataaaataaaaataaataaattattaaaaattattttaaaaggaag
aatgtttgcatctatgttcatcagggatattggcccatacttttttttta
aatgttattttaatgctatcttcacttggttttgttatcagggcaacgat
ggcttcaaagaatgagtttggaagtttcccttccattttttggaaccttt
tgataggtgttggtattttttcttcacagtttgtaaaatttggccaagtc
tccctgttccgggtcttgatatatatggagatttattgttgctttgatat
cattgtttgtgatagcaccctataagttgcttatatcttcttgacttagc
tttgttaggtcatctttgaagacatttatccattttttccagactttaca
ggtttattggaatataatttcaaagtgtcccatcatggtcctctgaattt
caccggtctctacttttactaatttgggtccatttcagtgtggaaagtcc
tttgccaatcctatttaactttttaaagaaacgactttttgttaggttga
cttgggattatctactttgtctctactccatgaaaaggttggaacaagga
aaatagatccctatctctcaccctgaaccaaaatcaaagaaagaattgga
tcagagacctcagctgacctgaaacttcccaaattgcctggaggaaaaca
cagaaaaacccttgatgatgtgggcacagtattttttctgaaagagactg
gaattctgcatgagtgaaaagctggattaaaaaaccctgcacagcaatgt
taaatgaagcagtagggccaagagccgaactgtcaattgaaggaaagctt
actaccatgatcggacgattacatgaacctgcaaaaccaacctacccagc
cactatc

gaattcttttcctgagatttgtctgtgagctggttttaagaattgtgtag
agacagagttgttccctggaccgttccgtccatgtagcttcccacagagg
agaccagtgactagaaacacggagagaaagagagagacgtggtatttcac
tgtaaagatcttgcctgttgatggaaattcttcccaatttcagggcccag
tgcttcttcgtgcatcttctgcaccacgcctctacacctcgaaagtctcc
tggctatctgttcttccatgtgattcctttctctgctgaagcctctgtca
gctctctgagcaggatgtgggtgggaaggtcccttcagctgccctctgtg
gacagaggagctggccagcatctttcgtagtgtcttttcccaccagcctg
gaaggacactgctcttctctggagggaaaggcagcattgctaaacaaaag
cccattgtcgcttctctgattccatgggtcagaagtctacttggttttac
aggctttcagggctgcttggctctgggtagcaagcccttccgttttcgta
cctcttcctcctctttgatcttttctgcctccagactttctaataggaga
cttggacacctgagatcttctccccacattgtatcacccctaggcctttc
ctgtgttccccttctgtgggctccaccctgcaagtttgctgactactctc
tagacctggcctttttcaccacataacacagccctgcatcttaagacctg
aacactgtgttcatcttaagcctattttgtctccttggttttgtgtggtc
actatagtgtttccttatatgtttttaacaagatgatgggaatttaggat
ttattatagttccctttcttcatcccccaaatcatttctgcccttctcag
aattagctggtggaatgtatatttttctggcctccctttttctgtgcctt
ggctttttgcagaataccctggtgaatctgtttgtcccgcctcttgttac
atgggaaggggatgcttggaagttcttacagccaagagaagctagttact
ggtcagtgttcaaggaaacagtcagaatataagtgtaatgggttaggggt
gtttgctaaacttgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_87450700_87451784
seq2: B6Ng01-257P20.g_70_1186

seq1  GAATTCTTTTCCTGAGATTTGTCTGTGAGCTGGTTTTAAGAATTGTGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCCTGAGATTTGTCTGTGAGCTGGTTTTAAGAATTGTGTAG  50

seq1  AGACAGAGTTGTTCCCTGGACCGTTCCGTCCATGTAGCTTCCCACAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGTTGTTCCCTGGACCGTTCCGTCCATGTAGCTTCCCACAGAGG  100

seq1  AGACCAGTGACTAGAAACACGGAGAGAAAGAGAGAGACGTGGTATTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTGACTAGAAACACGGAGAGAAAGAGAGAGACGTGGTATTTCAC  150

seq1  TGTAAAGATCTTGCCTGTTGATGGAAATTCTTCCCAATTTCAGGGCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGATCTTGCCTGTTGATGGAAATTCTTCCCAATTTCAGGGCCCAG  200

seq1  TGCTTCTTCGTGCATCTTCTGCACCACGCCTCTACACCTCGAAAGTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTCGTGCATCTTCTGCACCACGCCTCTACACCTCGAAAGTCTCC  250

seq1  TGGCTATCTGTTCTTCCATGTGATTCCTTTCTCTGCTGAAGCCTCTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATCTGTTCTTCCATGTGATTCCTTTCTCTGCTGAAGCCTCTGTCA  300

seq1  GCTCTCTGAGCAGGATGTGGGTGGGAAGGTCCCTTCAGCTGCCCTCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGAGCAGGATGTGGGTGGGAAGGTCCCTTCAGCTGCCCTCTGTG  350

seq1  GACAGAGGAGCTGGCCAGCATCTTTCGTAGTGTCTTTTCCCACCAGCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGAGCTGGCCAGCATCTTTCGTAGTGTCTTTTCCCACCAGCCTG  400

seq1  GAAGGACACTGCTCTTCTCTGGAGGGAAAGGCAGCATTGCTAAACAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACACTGCTCTTCTCTGGAGGGAAAGGCAGCATTGCTAAACAAAAG  450

seq1  CCCATTGTCGCTTCTCTGATTCCATGGGTCAGAAGTCTACTTGGTTTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGTCGCTTCTCTGATTCCATGGGTCAGAAGTCTACTTGGTTTTAC  500

seq1  AGGCTTTCAGGGCTGCTTGGCTCTGGGTAGCAAGCCCTTCCGTTTTCGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTCAGGGCTGCTTGGCTCTGGGTAGCAAGCCCTTCCGTTTTCGTA  550

seq1  CCTCTTCCTCCTCTTTGATCTTTTCTGCCTCCAGACTTTCTAATAGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCTCCTCTTTGATCTTTTCTGCCTCCAGACTTTCTAATAGGAGA  600

seq1  CTTGGACACCTGAGATCTTCTCCCCACATTGTATCACCCCTAGGCCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACACCTGAGATCTTCTCCCCACATTGTATCACCCCTAGGCCTTTC  650

seq1  CTGTGTTCCCCTTCTGTGGGCTCCACCCTGCAAGTTTGCTGACTACTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCCCCTTCTGTGGGCTCCACCCTGCAAGTTTGCTGACTACTCTC  700

seq1  TAGACCTGGCCTTTTTCACCACATAACACAGCCCTGCATCTTAAGACCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTGGCCTTTTTCACCACATAACACAGCCCTGCATCTTAAGACCTG  750

seq1  AACACTGTGTTCATCTTAAGCCTATTTTGTCTCC-TGGTTTTGTGTGGTC  799
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACACTGTGTTCATCTTAAGCCTATTTTGTCTCCTTGGTTTTGTGTGGTC  800

seq1  ACTATAGTGTTTCCTTATATG-TTTTAGCAAGATGAT-GGAATTTAGGA-  846
      ||||||||||||||||||||| ||||| ||||||||| ||||||||||| 
seq2  ACTATAGTGTTTCCTTATATGTTTTTAACAAGATGATGGGAATTTAGGAT  850

seq1  TTATTATAGTT-CCTTTCTTCAT-CCCCAAATCATTTCTG-CCTTCTCAG  893
      ||||||||||| ||||||||||| |||||||||||||||| |||||||||
seq2  TTATTATAGTTCCCTTTCTTCATCCCCCAAATCATTTCTGCCCTTCTCAG  900

seq1  AATTAGCT-GTGGAATGTATA-TTTTCT-GCCTCCC-TTTTCTGTG-CTT  938
      |||||||| |||||||||||| |||||| ||||||| ||||||||| |||
seq2  AATTAGCTGGTGGAATGTATATTTTTCTGGCCTCCCTTTTTCTGTGCCTT  950

seq1  GGCTTTTTGTAG-ATA-CCTGGTGATCCTGTTTGT-CCGGCTC-TGTTAC  984
      ||||||||| || ||| ||||||||  |||||||| ||| ||| ||||||
seq2  GGCTTTTTGCAGAATACCCTGGTGAATCTGTTTGTCCCGCCTCTTGTTAC  1000

seq1  ATGGGA--GGGAAGC-TGGAGGT--CTACAGCC-AGAG-AGC-AGTAACT  1026
      ||||||  |||| || |||| ||   ||||||| |||| ||| ||| |||
seq2  ATGGGAAGGGGATGCTTGGAAGTTCTTACAGCCAAGAGAAGCTAGTTACT  1050

seq1  GGTCAGTGTTC-AGGAAACAGTCAGAATATA---GTAAATGGTTA-GGGT  1071
      ||||||||||| |||||||||||||||||||   ||||  ||||| ||||
seq2  GGTCAGTGTTCAAGGAAACAGTCAGAATATAAGTGTAATGGGTTAGGGGT  1100

seq1  GTT---GTAACTTGTCA  1085
      |||     |||||||||
seq2  GTTTGCTAAACTTGTCA  1117


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