BAC Information

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BAC

Clone NameB6Ng01-260E16
Chromosome15 (Build37)
Map Location 26,884,988 - 26,886,186
singlet/doubletsinglet
Overlap genenone
Upstream gene1810015C04Rik, Zfp622, AK162044, Fbxl7, LOC622531
Downstream geneLOC625311, Ank, BC087945, LOC100040622, BC052328, Trio
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260E16.bB6Ng01-260E16.g
ACCGA065250GA065251
length1,1891,210
definitionB6Ng01-260E16.b B6Ng01-260E16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgacttttagtgcccattcatcttaaaccttctgaagctgttct
catgagcaactgtatatagtatgcaggatgaactcacctgatgacatgag
tttctttgggcattctccagtgtatatttggtgcctggtagcatacgaca
atcccatctttaaattaatcctcaatcattgtctggaaatacatgctatc
ttcaaaaccaaaaaatgttctggaggcagaagattcatgtccaaaagtgt
ttgtttgtttgtttgtttgtttgttttgacagttttattcaatgagcata
ccactgagtacagccaacatgccatagtacaccatgaatcaccacacttc
atacaatcttttcccacttcggtgaagtccttccaaactaatttcaatat
ggctacacttaaagtgtgttcatgttcatatatacatgtggtcgcttatc
cttagccacccaccttctctgctgcctggtcccacacctctggctctctc
gcataaatcttctcctccatatctatcctgattctgctttcccatcacct
ttggtgatacccttttccccttctcccttccttcagatctcttcctcctc
cctcatgatcctctttcccttttaatgatatacatagaaacgtgcaaaca
catatgcgcgtaaaaaatttaaattcatatttggaatatgacatttgtct
ttttgactctagaatatttcacttaacataataacctacaattctacaca
ttttcttgcaaatgtagtaatttcattttttcttaatggaactaaataat
atttaactatatataagtaccatattttctctatttatccatctgttgat
ggacattatgatgactctatttcttagctattgccaatagtgttcacatc
catagccttcacaccaataaacaatcatattttcttcgaaagctctcagc
tcacttctctttgcagccttgatatttaaatctcatttacttgcatctaa
tttaaaggtccagtagcagaaaatagtctttgtttcagtctcatatgaaa
ggataagggagaaagggttcatatgctttttttaagaagtcattatgtct
tctattattcacactgccaattaatatattctactcaaagttttcttggc
ttgaactctatcatcgtaattagttaactattaccttaa

gaattccaggatgggatattgggttatttaaaccgttggaatttggtttt
gctttgttcagactgtgacttgccatgtttcttccttgttgaagtaaatt
atttaacttaaattttgttttataggagtctgtacttgaaaaactttgaa
cttttaaagagacttcgaatttgacaaagactttgagttttaaaagagac
tgaatattttaaagagatggaatttgtaagtgtttgaatatttaaagact
atagaacttttaaaatctggaatgtttacattttaatgtcaatattaatc
tctgatcttggagataaagacaagaaggaaaggctgtggcttgacagcaa
tgtgcttgtgtgtcaatttaacaagaggtcagttgtggtggctagttttg
tgtcaaacacaagctagagtcatctgagaggatggagactcaatggagaa
aatgcttctgtaagactgggctgtaggcaagcctgtggtgcactttcttt
attgatgattgctatggtaggatgcatctcactgtgaggaatggcacccc
tgggctggtggtcctgggatctataagaaaacatgctgagcaaaccaggg
gaagcaagccagtaagcagcattcctccatggcttctgcatccacacctg
cctccaagctcctgccctgtatgagttccaggcctgacttcctttggtaa
tgaacagcagtgtggaagtgtaagctgaataaaccctttcctccccacct
tgcttggtggtcatgatgtttgtgcaggaatagaaaccctgactaagaca
gcaagtcaataagcagcacttcttcatggcctctgcatcagatccggcct
ccaagttcctgccctatggaaaatataagccaaataaatgattttcttcc
caagttgctttcagtcatagtgtttccacatagcgatggaaatcctaact
aagacattctggaatacaccaagcacttcattcctccttgaacatacttg
ggctctgattccatgaatagtttaaagctattcttacctgcatggtgtgt
ctctcagctagatttatgtataaagtttagttcatgtaattatcatgtat
aaattatacctagtataggtgtagctactataaatgttctgtaataaata
ttgagtgtgtagggcactctctgctgcaccttctctgagagagagccaga
tgtatgatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26884988_26886186
seq2: B6Ng01-260E16.b_45_1233

seq1  GAATTCTGACTTTTAGTGCCCATTCATCTTAAACCTTCTGAAGCTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTTTTAGTGCCCATTCATCTTAAACCTTCTGAAGCTGTTCT  50

seq1  CATGAGCAACTGTATATAGTATGCAGGATGAACTCACCTGATGACATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCAACTGTATATAGTATGCAGGATGAACTCACCTGATGACATGAG  100

seq1  TTTCTTTGGGCATTCTCCAGTGTATATTTGGTGCCTGGTAGCATACGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGGGCATTCTCCAGTGTATATTTGGTGCCTGGTAGCATACGACA  150

seq1  ATCCCATCTTTAAATTAATCCTCAATCATTGTCTGGAAATACATGCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATCTTTAAATTAATCCTCAATCATTGTCTGGAAATACATGCTATC  200

seq1  TTCAAAACCAAAAAATGTTCTGGAGGCAGAAGATTCATGTCCAAAAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACCAAAAAATGTTCTGGAGGCAGAAGATTCATGTCCAAAAGTGT  250

seq1  TTGTTTGTTTGTTTGTTTGTTTGTTTTGACAGTTTTATTCAATGAGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGTTTGTTTGTTTTGACAGTTTTATTCAATGAGCATA  300

seq1  CCACTGAGTACAGCCAACATGCCATAGTACACCATGAATCACCACACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGTACAGCCAACATGCCATAGTACACCATGAATCACCACACTTC  350

seq1  ATACAATCTTTTCCCACTTCGGTGAAGTCCTTCCAAACTAATTTCAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATCTTTTCCCACTTCGGTGAAGTCCTTCCAAACTAATTTCAATAT  400

seq1  GGCTACACTTAAAGTGTGTTCATGTTCATATATACATGTGGTCGCTTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACACTTAAAGTGTGTTCATGTTCATATATACATGTGGTCGCTTATC  450

seq1  CTTAGCCACCCACCTTCTCTGCTGCCTGGTCCCACACCTCTGGCTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCACCCACCTTCTCTGCTGCCTGGTCCCACACCTCTGGCTCTCTC  500

seq1  GCATAAATCTTCTCCTCCATATCTATCCTGATTCTGCTTTCCCATCACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAATCTTCTCCTCCATATCTATCCTGATTCTGCTTTCCCATCACCT  550

seq1  TTGGTGATACCCTTTTCCCCTTCTCCCTTCCTTCAGATCTCTTCCTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGATACCCTTTTCCCCTTCTCCCTTCCTTCAGATCTCTTCCTCCTC  600

seq1  CCTCATGATCCTCTTTCCCTTTTAATGATATACATAGAAACGTGCAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGATCCTCTTTCCCTTTTAATGATATACATAGAAACGTGCAAACA  650

seq1  CATATGCGCGTAAAAAATTTAAATTCATATTTGGAATATGACATTTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCGCGTAAAAAATTTAAATTCATATTTGGAATATGACATTTGTCT  700

seq1  TTTTGACTCTAGAATATTTCACTTAACATAATAACCTACAATTCTACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACTCTAGAATATTTCACTTAACATAATAACCTACAATTCTACACA  750

seq1  TTTTCTTGCAAATGTAGTAATTTCATTTTTTCTTAATGGAACTAAATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGCAAATGTAGTAATTTCATTTTTTCTTAATGGAACTAAATAAT  800

seq1  ATTTAACTATATATAAGTACCATATTTTCTCTATTTATCCATCTGTTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACTATATATAAGTACCATATTTTCTCTATTTATCCATCTGTTGAT  850

seq1  GGACATTATGATGACTCTATTTCTTAGCTATTGCCAATAGTGTTCACATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTATGATGACTCTATTTCTTAGCTATTGCCAATAGTGTTCACATC  900

seq1  CATAGCCTTCACACCAATAAACAATCATA-TTTCTTCGAAAGCTCTCAGC  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CATAGCCTTCACACCAATAAACAATCATATTTTCTTCGAAAGCTCTCAGC  950

seq1  TCACTTCTCTTTGCAGCCTTGATATTTAAATCTCATTTACTTGCATCTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTCTTTGCAGCCTTGATATTTAAATCTCATTTACTTGCATCTAA  1000

seq1  TTTAAAGGTCCAGGTAGCAGAAAATAGTCTTTGTTTTCAGTCTCAATATG  1049
      |||||||||||| |||||||||||||||||||| |||||||||| |||||
seq2  TTTAAAGGTCCA-GTAGCAGAAAATAGTCTTTG-TTTCAGTCTC-ATATG  1047

seq1  AAAGGGATAAAGGGAGGAAAGGGTTCATATGGCTTTTTTAAGAAGTCATT  1099
      ||| |||| |||||| |||||||||||||||  |||||||||||||||||
seq2  AAA-GGAT-AAGGGA-GAAAGGGTTCATATGCTTTTTTTAAGAAGTCATT  1094

seq1  AATGTCTTCTA-TATTCAACACTGCAAAATAATATATTCTACTCAAAATT  1148
       |||||||||| ||||| ||||||| || |||||||||||||||||| ||
seq2  -ATGTCTTCTATTATTC-ACACTGCCAATTAATATATTCTACTCAAAGTT  1142

seq1  TTCTTGCTTTGACTTTCTATCCATCCTAAATAATTTAAACTATTACCTTA  1198
      ||||||  ||||   ||||| |||| ||| || ||  |||||||||||||
seq2  TTCTTGGCTTGA-ACTCTAT-CATCGTAATTAGTT--AACTATTACCTTA  1188

seq1  A  1199
      |
seq2  A  1189


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