BAC Information

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BAC

Clone NameB6Ng01-262C20
Chromosome15 (Build37)
Map Location 98,450,337 - 98,450,621
singlet/doubletsinglet
Overlap genenone
Upstream geneD15Ertd682e, Pp11r, Rapgef3, 4930570C03Rik, Hdac7a, Vdr, Tmem106c, Col2a1, Senp1, Pfkm, Asb8, AI836003, Olfr288, LOC634104, EG629524, H1fnt, Zfp641, Olfr285, Olfr284, Olfr283, 1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6
Downstream geneCacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik, Wnt10b, Wnt1, Ddn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262C20.bB6Ng01-262C20.g
ACCGA066663GA066664
length522287
definitionB6Ng01-262C20.b B6Ng01-262C20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aagatcaacctggacaaagcaagctgctgtctcaaagaaagtaagttaag
cgactgattaaagtaaaacaagaactttataccccgacttctgcatgcag
gtttgcagagcctgtgatggaaagcatcccggaccaagattctacagacc
tagtctgtactggacagatcccagaccagcactgggactcagctggtcat
cggctgctccgggcttttgtctcttcatctacttcccataagggtgaagc
cagatgatctcttctctgttttgttttgttttgttttgttttgttttgtt
ttagactcgaactaacggagggagtcggtggtgtctctgactcgctcacc
tgctctggggaccatttttctcctactgggttgcctcacccaacccttgt
gcctaggcttattatatcttgatatgccgtgtgcagttgatatccctggg
acacctgctcttttctgaagggaactggaggaggaggagatcttgagggg
acagggggagaggtggtgagga
caggacatccagggctacacaaagaaactctttctggaaaaagtggagag
agagagagagagagagagagagagagagagagagagagagagagagagag
agagagagagatggagagagagagatggagggagggagggtatatatttc
tgacacatttgttagaataccattgtatgtaagaggcgagagactctgac
aggaatgttgtttaaaaggcccaaactgtatcctattaggtccaggtcca
ggttcagaactgaacagagaaaccaaatctctccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_98450337_98450621
seq2: B6Ng01-262C20.g_72_358

seq1  CAGGACATCCAGGGCTACACAAAGAAACTCTTTCTGGAAAAAGTG--GAG  48
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  CAGGACATCCAGGGCTACACAAAGAAACTCTTTCTGGAAAAAGTGGAGAG  50

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  100

seq1  AGAGAGAGAGATGGAGAGAGAGAGATGGAGGGAGGGAGGGTATATATTTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGATGGAGAGAGAGAGATGGAGGGAGGGAGGGTATATATTTC  150

seq1  TGAAACATTTGTTAGAATACCATTGTATGTAAGAGGCGAGAGACTCTGAC  198
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACATTTGTTAGAATACCATTGTATGTAAGAGGCGAGAGACTCTGAC  200

seq1  AGGAATGTTGTTTAAAAGGCCCAAACTGTATCCTATAAGGTCCAGGTCCA  248
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGAATGTTGTTTAAAAGGCCCAAACTGTATCCTATTAGGTCCAGGTCCA  250

seq1  GGTTCAGATCTGAACAGAGAAACCAAATATCTCCCTG  285
      |||||||| ||||||||||||||||||| ||||||||
seq2  GGTTCAGAACTGAACAGAGAAACCAAATCTCTCCCTG  287