BAC Information

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BAC

Clone NameB6Ng01-263B20
Chromosome15 (Build37)
Map Location 44,365,344 - 44,365,946
singlet/doubletsinglet
Overlap genePkhd1l1
Upstream geneLOC100039288, Tmem74, LOC100039309, Trhr, LOC665041, Nudcd1, Eny2
Downstream geneEbag9, 5730410E15Rik, A930017M01Rik, EG432950, Kcnv1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263B20.bB6Ng01-263B20.g
ACCGA067364GA067365
length6031,182
definitionB6Ng01-263B20.b B6Ng01-263B20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaccatattggtctgtaactctgaatgtgcagttgacaaactaa
gatctaactctacaacactgttctgtgtgattcctcctaacaatggtaaa
tactcaaaaaaaaaaaaaaaaggtaacctgtgagaaatgctaattttaga
aagattacagtcttttctgaggttgttgaattcttttgaagtagttgagt
tggatgtatgaccatcttgacttcaagcaatttggtcagaactgaatttc
ctatttgtgtaaatcagaaaactttggtttgtgacatcaattcatgactt
ttagttgagcattcaaatggaaaacctgttgtaacttcttgttagtcaaa
ttttctttaaaggcaactagaaagtgttgagagaaggaaaaatagttttc
tccagagaaaagcacaccaactggttatcttacaccaaaaggtcagccca
gaaaacatacctacaagtaacatcatacagaccgattatgttgtatttag
aaataagacatatatatgaatatcacaacaattagtgggaaaaggtcata
aacttgaaagagagcaaaggagggtatatgggggttttggagaggaggaa
aat

gaattcatgtagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggattttctcgtcccggaattcggca
ccaattgttattagacgcgttctcacgaccggccaggaagaacaccacag
accagaatcttctgcggcaaagctttatttcttacatcttcaggagccag
ggtgcaggaagcaagagagcaagaagcaagagagagagaaaacgaaaccc
cgtccctcttaaggagcattctccttcgcctcggacgtgtcactccctga
ttggctgcagcccatcggccgagttgacgtcacggggaaggcagagcaca
agtagtcataagatacccttggcacatgcgcagattatttgtttaccact
tagaacacagctgtcagcgccatcttgtaacggcgaatgtgggcgcggct
cccaacaaataaaaccatccaagacctaaaaagggaagtagacacaataa
agaaaacccaaagtgaggcaacactggagatagaaacactaggaaagaaa
tctggaaccatagatgcgagcatcagcaacagaatacaagaaatggaaga
gagaatctcaggtgcagaagattccatagagaacatcggcacaacaatca
aagaaaatggaaaatgcaaaaagatcctaactcaaaacatccaggaaatc
caggacacaatgagaagaccaaacctacggataataggagtggatgagaa
tgaagattttcaactcaaaggaccagcaaatatcttcaacaagattattg
aaagaaaacttcccaaatctaaagaaagagatacccatgaacatacaaga
agcctacagaactccaaatagactgggaccagaaaaagaaattcctcccg
acacataataatcagaacaacaaatgcactaaataaagatagaatactaa
aagcagtagggaaaagtcaggtaacatataaagcaagcctatcagattac
accagatttttcaccagagattatgaagcagaagaagcctggacgatgta
atacagacacctagagaaccgaatcagctaaggctactataccaagccaa
cttcttcaattatcccaattagaatgtggcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_44365344_44365946
seq2: B6Ng01-263B20.b_46_648

seq1  GAATTCAACCATATTGGTCTGTAACTCTGAATGTGCAGTTGACAAACTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCATATTGGTCTGTAACTCTGAATGTGCAGTTGACAAACTAA  50

seq1  GATCTAACTCTACAACACTGTTCTGTGTGATTCCTCCTAACAATGGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAACTCTACAACACTGTTCTGTGTGATTCCTCCTAACAATGGTAAA  100

seq1  TACTCAAAAAAAAAAAAAAAAGGTAACCTGTGAGAAATGCTAATTTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAAAAAAAAAAAAAAAAGGTAACCTGTGAGAAATGCTAATTTTAGA  150

seq1  AAGATTACAGTCTTTTCTGAGGTTGTTGAATTCTTTTGAAGTAGTTGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTACAGTCTTTTCTGAGGTTGTTGAATTCTTTTGAAGTAGTTGAGT  200

seq1  TGGATGTATGACCATCTTGACTTCAAGCAATTTGGTCAGAACTGAATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTATGACCATCTTGACTTCAAGCAATTTGGTCAGAACTGAATTTC  250

seq1  CTATTTGTGTAAATCAGAAAACTTTGGTTTGTGACATCAATTCATGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGTGTAAATCAGAAAACTTTGGTTTGTGACATCAATTCATGACTT  300

seq1  TTAGTTGAGCATTCAAATGGAAAACCTGTTGTAACTTCTTGTTAGTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGAGCATTCAAATGGAAAACCTGTTGTAACTTCTTGTTAGTCAAA  350

seq1  TTTTCTTTAAAGGCAACTAGAAAGTGTTGAGAGAAGGAAAAATAGTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTAAAGGCAACTAGAAAGTGTTGAGAGAAGGAAAAATAGTTTTC  400

seq1  TCCAGAGAAAAGCACACCAACTGGTTATCTTACACCAAAAGGTCAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGAAAAGCACACCAACTGGTTATCTTACACCAAAAGGTCAGCCCA  450

seq1  GAAAACATACCTACAAGTAACATCATACAGACCGATTATGTTGTATTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATACCTACAAGTAACATCATACAGACCGATTATGTTGTATTTAG  500

seq1  AAATAAGACATATATATGAATATCACAACAATTAGTGGGAAAAGGTCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGACATATATATGAATATCACAACAATTAGTGGGAAAAGGTCATA  550

seq1  AACTTGAAAGAGAGCAAAGGAGGGTATATGGGGGTTTTGGAGAGGAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAAAGAGAGCAAAGGAGGGTATATGGGGGTTTTGGAGAGGAGGAA  600

seq1  AAT  603
      |||
seq2  AAT  603


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