BAC Information

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BAC

Clone NameB6Ng01-263C04
Chromosome15 (Build37)
Map Location 49,766,470 - 49,767,594
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039600, LOC100039539, LOC665160
Downstream geneTrps1, LOC100039644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263C04.bB6Ng01-263C04.g
ACCGA067378GA067379
length1,2011,114
definitionB6Ng01-263C04.b B6Ng01-263C04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatggctgagaagctcctgaaaaaatgttcaaca
tccttaatcatcaggaaaatgaaaatgaaaacaacccttagattctacct
catgccagtcagaatggctaagttcaaaaactcaggtgacagcagatgct
ggtgaggatgtggagaaagaggaacactcctctactgctggtgggattgc
aaactggtagaagcattctggaaatcagtttggcggttcctcagaaaatt
ggacacggtactacaggaagattcagcaatacctctcctgaccatatacc
cagaagatgctccaacttgtcataaggacacatgctccatatgttcatag
caggcttatttataatatccagaagctgaaaagaacccagaagtccctca
acagaggaatgtatacagaaaatatggtacatttacataattcagtacta
ctcacctattaaaacagtgaatttctgaaattcttagacaaatagttaga
tatggaaaatatcaaaatgtgaggtaccccaatcacaaaataaaacatat
gatatgtactcacaggtaagaggatattagccccaaaactcagaataccc
aagatacaatttgcacagcacatgaaactcaagaaggaggaccaacattt
agatacttcgttccttcttagaatggggaacaaaatacccatggaaggat
ttacagagcaaagttctgagcagagactaaagaaatgaccattcagagac
tgccccacctggggatccatcccataaacaaccaccaaacccagactcaa
gatggtaataactcaagaaggtagacaccaacaacctaaatcacccagtt
agaagtggggtacagaactaaacagagaatcctcaacagaggaattttga
atggctgagaaacaattaaatgcttaaagtccttagtcatcagggaaagg
aaaatcaaaacaacactaagttccatcttatacccatcagaagttagatc
aaatattcagagataccacatgttgtgagatggagaatagcaacattcct
ccatctgtcagagggaaatttctaccacttcaatcatctccatttctcag
aaatctgaagatagtctaacttcaaaaccagcctatacgctctggcatat
agcaaaagaatgcccgacatctcaatgaacaagttgtcgtctagcattag
t
gaattcttggtcttgttgaatatctttgttttttttttttttcattttta
gcaatcaaaaatgctagacggggatgaattctttattacagcctgggttg
cactaataagatgctttttgaagaaagaaatggaaaaatagaacaggaca
taaaagatgacaaaaggagaaaagaaatgatagagaagaaaaatgaggca
aacagaaaggcaggaatggagaaagacagtcttcctccactatcatatgg
tataccacctctaatacgaacaacagcatagttatctattcaggcctgta
cttcctatctatcaccaatatgttttttgttttttacagttctgagattt
ctgtgtctttgtttatgcttagaggccctacttctcgaagtttgtttgat
ttcatggtgactatctctcaggaaatcagaacactaagctgacgtctttc
aagctttagttaagtatagtgtctgtcagtttcagaagagccatggggtg
tagactgtacatgctgtcagatttatgattgtctagaaggtgatctaaga
gaatcagacagatggatggatgtgaaaaacactgcattaggtattagtta
gtagttgcacagaaccaagcagcttaggattgataggaaataccttgtct
cgttcttaccagatttgccaatcactttctacttgcctaaacatgcagat
attgcttaatggctttcagttgtttgtaatataacattttgacaaacaca
atttcactaagtgatatcttattatgagaaattgtagtttttaaaagtct
tctcctctatgagctccttttgaatttagttacttttagaaattttattt
tgttaaagcgtgatagtccatcccagtgtcctgtcctttctctattcctg
ttcctattattgtgtctcctctaccacaattggctgtagcctaattgggt
aagaactgtaacacaagtaaatcttttctcctcaaaactttatttttaga
attataatataatactaccatctgactcccttccctccttacatgtctct
atatactctccttgctcattcatatctgactctttgaatggtatccttat
gcatgaatatatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_49766470_49767594
seq2: B6Ng01-263C04.g_66_1179 (reverse)

seq1  CCATATATTCATGCAATAAGAATTAACAATCAAAGAGTCCAAGATATGGA  50
      |||||||||||||| ||||| | || || ||||||||||  ||||||| |
seq2  CCATATATTCATGC-ATAAGGA-TACCATTCAAAGAGTC--AGATATGAA  46

seq1  TGGAAGCAGGGAGAGTATATAGGAGGACATGTAGGGAGGGAAGGGAAGTC  100
      ||  |||| |||||||||||||   |||||||| ||||||||||| ||||
seq2  TG--AGCAAGGAGAGTATATAG--AGACATGTAAGGAGGGAAGGG-AGTC  91

seq1  AGAATGTAGTAATTATATTATAATTCTAAAAATAAAGTTTTTGAGGAAGA  150
      |||  ||||| |||||||||||||||||||||||||| |||||||| |||
seq2  AGATGGTAGT-ATTATATTATAATTCTAAAAATAAAG-TTTTGAGG-AGA  138

seq1  AAAGATTTACTTGTGTTACAGTTCTTACCCAATTAGGCTACAGCCAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTACTTGTGTTACAGTTCTTACCCAATTAGGCTACAGCCAATTG  188

seq1  TGGTAGAGGAGACACAATAATAGGAACAGGAATAGAGAAAGGACAGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGGAGACACAATAATAGGAACAGGAATAGAGAAAGGACAGGACA  238

seq1  CTGGGATGGACTATCACGCTTTAAC-AAATAAAATTTCTAAAAGTAACTA  299
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGGGATGGACTATCACGCTTTAACAAAATAAAATTTCTAAAAGTAACTA  288

seq1  AATTCAAAAGGAGCTCATAGAGGAGAAGACTTTTAAAAACTACAATTTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAAAGGAGCTCATAGAGGAGAAGACTTTTAAAAACTACAATTTCT  338

seq1  CATAATAAGATATCACTTAGTGAAATTGTGTTTGTCAAAATGTTATATTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAAGATATCACTTAGTGAAATTGTGTTTGTCAAAATGTTATATTA  388

seq1  CAAACAACTGAAAGCCATTAAGCAATATCTGCATGTTTAGGCAAGTAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACTGAAAGCCATTAAGCAATATCTGCATGTTTAGGCAAGTAGAA  438

seq1  AGTGATTGGCAAATCTGGTAAGAACGAGACAAGGTATTTCCTATCAATCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTGGCAAATCTGGTAAGAACGAGACAAGGTATTTCCTATCAATCC  488

seq1  TAAGCTGCTTGGTTCTGTGCAACTACTAACTAATACCTAATGCAGTGTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGCTTGGTTCTGTGCAACTACTAACTAATACCTAATGCAGTGTTT  538

seq1  TTCACATCCATCCATCTGTCTGATTCTCTTAGATCACCTTCTAGACAATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATCCATCCATCTGTCTGATTCTCTTAGATCACCTTCTAGACAATC  588

seq1  ATAAATCTGACAGCATGTACAGTCTACACCCCATGGCTCTTCTGAAACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTGACAGCATGTACAGTCTACACCCCATGGCTCTTCTGAAACTG  638

seq1  ACAGACACTATACTTAACTAAAGCTTGAAAGACGTCAGCTTAGTGTTCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACTATACTTAACTAAAGCTTGAAAGACGTCAGCTTAGTGTTCTG  688

seq1  ATTTCCTGAGAGATAGTCACCATGAAATCAAACAAACTTCGAGAAGTAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGAGAGATAGTCACCATGAAATCAAACAAACTTCGAGAAGTAGG  738

seq1  GCCTCTAAGCATAAACAAAGACACAGAAATCTCAGAACTGTAAAAAACAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTAAGCATAAACAAAGACACAGAAATCTCAGAACTGTAAAAAACAA  788

seq1  AAAACATATTGGTGATAGATAGGAAGTACAGGCCTGAATAGATAACTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATATTGGTGATAGATAGGAAGTACAGGCCTGAATAGATAACTATG  838

seq1  CTGTTGTTCGTATTAGAGGTGGTATACCATATGATAGTGGAGGAAGACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTCGTATTAGAGGTGGTATACCATATGATAGTGGAGGAAGACTG  888

seq1  TCTTTCTCCATTCCTGCCTTTCTGTTTGCCTCATTTTTCTTCTCTATCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCCATTCCTGCCTTTCTGTTTGCCTCATTTTTCTTCTCTATCAT  938

seq1  TTCTTTTCTCCTTTTGTCATCTTTTATGTCCTGTTCTATTTTTCCATTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTCCTTTTGTCATCTTTTATGTCCTGTTCTATTTTTCCATTTC  988

seq1  TTTCTTCAAAAAGCATCTTATTAGTGCAACCCAGGCTGTAATAAAGAATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCAAAAAGCATCTTATTAGTGCAACCCAGGCTGTAATAAAGAATT  1038

seq1  CATCCCCGTCTAGCATTTTTGATTGCTAAAAATGAAAAAAAAAAAAAACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCGTCTAGCATTTTTGATTGCTAAAAATGAAAAAAAAAAAAAACA  1088

seq1  AAGATATTCAACAAGACCAAGAATTC  1125
      ||||||||||||||||||||||||||
seq2  AAGATATTCAACAAGACCAAGAATTC  1114