BAC Information

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BAC

Clone NameB6Ng01-264D01
Chromosome15 (Build37)
Map Location 9,716,297 - 9,753,052
singlet/doubletdoublet
Overlap genenone
Upstream geneEG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l, 1110020G09Rik, Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r, C230086A09Rik
Downstream genePrlr, Agxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264D01.bB6Ng01-264D01.g
ACCGA068159GA068160
length1,0851,167
definitionB6Ng01-264D01.b B6Ng01-264D01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,751,967 - 9,753,052)(9,716,297 - 9,717,473)
sequence
gaattcactattttatgcttcaaccactagtgttttagataatttccttt
tgttgattattatagaataaatgtgtctgcttcccaacaactatactctg
tcttactcctttgcaattgtacacagaagcacatacaaaataatcatgaa
tcagaccttagttatagtgctattgacaatgtcagcttgattatttgggt
tgtgagtcaagggcaggactgtcatgtatcatagactatatagtgttatc
cattgcttgtagcaactaaaatggtcacactgtccactgtaagagagaaa
aaaatagaaagttaataatgaaggccaagatttctctggaggaatagaat
ctactatgaagctactttcatattatttttgaattgttatatgagaggac
tttcttggaaaccagttaaggagtgtaatttcatctattaaatatccata
gagataaaagcctacaaaattttgaaattactagtcattatttctgagta
gaatattcttaggaaaattttcaaatggtaaagtatcattttagtgtttt
attagattcaattttttctaaatggattatgtgagatttgtgtgtgtatt
tgtatatgttacatatatgtatatatatgtattcatgtgtgtacacctgt
gtatgcatttgtctggaggtcaatgtcagctgtcttcctttatttttctg
aacctaactttttgagacaaggtctgtcattaagactgagctcattgatg
tggttagggctggctagtcaatggtctccagaaatctgcctttatccatc
ttccacactgagagagttacagctgggcttcaatgctgggctttctatat
gggggctggggatctgaacttggttcttcatgctcacatatcaaacacta
ttaactaaacacttttcccatctattgatgggaggatatgtatattttta
atacaatattaccttttaaaaatattactaaacaacatgattttgcctgg
gatgatgcatatcataagtatgcttagagcgagatcaattaatatggata
acatatatcattgtcagtaacatattgtcgtttgt
gaattctctctctcaagatgccatataagtgagagctttgaagctcagta
tccagagtagcttttctcccttccgtcccatttaagaacaatgggaaaga
ctacatcgatgggcttttgttaagagactgacttgacttgaacacttgta
tttttaatgtgttgcctctactaagagcttgtgaatcatcttgtatataa
gtacatttttaagcaaacactattctgaaccatggaaataaagattactg
aagtcattgatgtgccccttggttcttttaaatgaaaacattttacagag
agaatagtgatggactcataggacctgagtggaaagttaaagggattctg
gcttgttaaagtttcagatgagaccctagaaagtttcctgcctgtcaatg
gacaaaagtaaagacaggaagaatatatagatcagtggtcataacttcca
gcaattagaaaagaagtgtggacactttgccccttcttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggggctgagacaaa
aggatggaccatctagagactgccatatctggggaatggcttttgagaaa
tgtctgaggaaaatgaagaaccagatatgtgagaaaaatcacttcaggaa
tcaagaagaaataatgaaggtggtaatcaggcaagaataagaaggattct
ggggtcctcactagattccttttgatagaggcatgggatcattcaggaat
gtgagcttcacttgaggccaaatggcaccttttagtaccctgctaagtag
catttatttgaaagggagtcttattctacattccccctgtctctattgaa
gacagttaattgaacttaaaggcatctattaattcagtaataactgagag
atcaaattcttgaatataagcttaacagctttcaaagatgaggacttcca
tttttcatggctctggtgcataacccagctacaaataggagattcaaaga
atgatgaatactagttgtttcttttcagcaaagactaaatgcttgttctt
ttcagctcagatgaatgagagaaagttgtattcttgtgcttttaatttct
actagactaatctcttgtgatgatgcaatgatgagcctgtgatcttttgg
aaatgtgaaagccagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_9751967_9753052
seq2: B6Ng01-264D01.b_44_1128 (reverse)

seq1  ACAAAAAGACAATTATGTTACTGACAATTTATATATGTTATTCAATATTT  50
      || ||| ||||| |||||||||||||| | |||||||||| || ||||| 
seq2  AC-AAACGACAA-TATGTTACTGACAA-TGATATATGTTA-TCCATATTA  46

seq1  AATGATCTCGCTTTTAGCATAATTATGATTATGCATCAT-CCAG--CAAA  97
      | |||||||||| | |||||| |||||| |||||||||| ||||   |||
seq2  ATTGATCTCGCTCTAAGCATACTTATGA-TATGCATCATCCCAGGCAAAA  95

seq1  TTATGTTTGTTTAGTAATATTTTTAAAA-GTAATATTGTATTAAAAATAT  146
      | ||| |||||||||||||||||||||| |||||||||||||||||||||
seq2  TCATG-TTGTTTAGTAATATTTTTAAAAGGTAATATTGTATTAAAAATAT  144

seq1  ACATATCCT-CCATCAATAGATGGGAAAAGTGTTTAGTTAATAGTGTTTG  195
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCCTCCCATCAATAGATGGGAAAAGTGTTTAGTTAATAGTGTTTG  194

seq1  ATATGTGAGCATGAAGAACCAAGTTCAGATCCCCAGCCCCCATATAGAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGAGCATGAAGAACCAAGTTCAGATCCCCAGCCCCCATATAGAAA  244

seq1  GCCCAGCATTGAAGCCCAGCTGTAACTCTCTCAGTGTGGAAGATGGATAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCATTGAAGCCCAGCTGTAACTCTCTCAGTGTGGAAGATGGATAA  294

seq1  AGGCAGATTTCTGGAGACCATTGACTAGCCAGCCCTAACCACATCAATGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGATTTCTGGAGACCATTGACTAGCCAGCCCTAACCACATCAATGA  344

seq1  GCTCAGTCTTAATGACAGACCTTGTCTCAAAAAGTTAGGTTCAGAAAAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTCTTAATGACAGACCTTGTCTCAAAAAGTTAGGTTCAGAAAAAT  394

seq1  AAAGGAAGACAGCTGACATTGACCTCCAGACAAATGCATACACAGGTGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGACAGCTGACATTGACCTCCAGACAAATGCATACACAGGTGTA  444

seq1  CACACATGAATACATATATATACATATATGTAACATATACAAATACACAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGAATACATATATATACATATATGTAACATATACAAATACACAC  494

seq1  ACAAATCTCACATAATCCATTTAGAAAAAATTGAATCTAATAAAACACTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCTCACATAATCCATTTAGAAAAAATTGAATCTAATAAAACACTA  544

seq1  AAATGATACTTTACCATTTGAAAATTTTCCTAAGAATATTCTACTCAGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATACTTTACCATTTGAAAATTTTCCTAAGAATATTCTACTCAGAA  594

seq1  ATAATGACTAGTAATTTCAAAATTTTGTAGGCTTTTATCTCTATGGATAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGACTAGTAATTTCAAAATTTTGTAGGCTTTTATCTCTATGGATAT  644

seq1  TTAATAGATGAAATTACACTCCTTAACTGGTTTCCAAGAAAGTCCTCTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGATGAAATTACACTCCTTAACTGGTTTCCAAGAAAGTCCTCTCA  694

seq1  TATAACAATTCAAAAATAATATGAAAGTAGCTTCATAGTAGATTCTATTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAATTCAAAAATAATATGAAAGTAGCTTCATAGTAGATTCTATTC  744

seq1  CTCCAGAGAAATCTTGGCCTTCATTATTAACTTTCTATTTTTTTCTCTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAGAAATCTTGGCCTTCATTATTAACTTTCTATTTTTTTCTCTCT  794

seq1  TACAGTGGACAGTGTGACCATTTTAGTTGCTACAAGCAATGGATAACACT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGACAGTGTGACCATTTTAGTTGCTACAAGCAATGGATAACACT  844

seq1  ATATAGTCTATGATACATGACAGTCCTGCCCTTGACTCACAACCCAAATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTCTATGATACATGACAGTCCTGCCCTTGACTCACAACCCAAATA  894

seq1  ATCAAGCTGACATTGTCAATAGCACTATAACTAAGGTCTGATTCATGATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCTGACATTGTCAATAGCACTATAACTAAGGTCTGATTCATGATT  944

seq1  ATTTTGTATGTGCTTCTGTGTACAATTGCAAAGGAGTAAGACAGAGTATA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTATGTGCTTCTGTGTACAATTGCAAAGGAGTAAGACAGAGTATA  994

seq1  GTTGTTGGGAAGCAGACACATTTATTCTATAATAATCAACAAAAGGAAAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGGGAAGCAGACACATTTATTCTATAATAATCAACAAAAGGAAAT  1044

seq1  TATCTAAAACACTAGTGGTTGAAGCATAAAATAGTGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAAACACTAGTGGTTGAAGCATAAAATAGTGAATTC  1085

seq1: chr15_9716297_9717473
seq2: B6Ng01-264D01.g_63_1229

seq1  GAATTCTCTCTCTCAAGATGCCATATAAGTGAGAGCTTTGAAGCTCAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTCAAGATGCCATATAAGTGAGAGCTTTGAAGCTCAGTA  50

seq1  TCCAGAGTAGCTTTTCTCCCTTCCGTCCCATTTAAGAACAATGGGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGTAGCTTTTCTCCCTTCCGTCCCATTTAAGAACAATGGGAAAGA  100

seq1  CTACATCGATGGGCTTTTGTTAAGAGACTGACTTGACTTGAACACTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCGATGGGCTTTTGTTAAGAGACTGACTTGACTTGAACACTTGTA  150

seq1  TTTTTAATGTGTTGCCTCTACTAAGAGCTTGTGAATCATCTTGTATATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATGTGTTGCCTCTACTAAGAGCTTGTGAATCATCTTGTATATAA  200

seq1  GTACATTTTTAAGCAAACACTATTCTGAACCATGGAAATAAAGATTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTTTAAGCAAACACTATTCTGAACCATGGAAATAAAGATTACTG  250

seq1  AAGTCATTGATGTGCCCCTTGGTTCTTTTAAATGAAAACATTTTACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATTGATGTGCCCCTTGGTTCTTTTAAATGAAAACATTTTACAGAG  300

seq1  AGAATAGTGATGGACTCATAGGACCTGAGTGGAAAGTTAAAGGGATTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGTGATGGACTCATAGGACCTGAGTGGAAAGTTAAAGGGATTCTG  350

seq1  GCTTGTTAAAGTTTCAGATGAGACCCTAGAAAGTTTCCTGCCTGTCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTAAAGTTTCAGATGAGACCCTAGAAAGTTTCCTGCCTGTCAATG  400

seq1  GACAAAAGTAAAGACAGGAAGAATATATAGATCAGTGGTCATAACTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGTAAAGACAGGAAGAATATATAGATCAGTGGTCATAACTTCCA  450

seq1  GCAATTAGAAAAGAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTAGAAAAGAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAAC  500

seq1  AAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGGGCTGAGACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGGGCTGAGACAAA  550

seq1  AGGATGGACCATCTAGAGACTGCCATATCTGGGGAATGGCTTTTGAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGACCATCTAGAGACTGCCATATCTGGGGAATGGCTTTTGAGAAA  600

seq1  TGTCTGAGGAAAATGAAGAACCAGATATGTGAGAAAAATCACTTCAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGGAAAATGAAGAACCAGATATGTGAGAAAAATCACTTCAGGAA  650

seq1  TCAAGAAGAAATAATGAAGGTGGTAATCAGGCAAGAATAAGAAGGATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGAAATAATGAAGGTGGTAATCAGGCAAGAATAAGAAGGATTCT  700

seq1  GGGGTCCTCACTAGATTCCTTTTGATAGAGGCATGGGATCATTCAGGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCCTCACTAGATTCCTTTTGATAGAGGCATGGGATCATTCAGGAAT  750

seq1  GTGAGCTTCACTTGAGGCCAAATGGCACCTTTTAGTACCCTGCTAAGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTTCACTTGAGGCCAAATGGCACCTTTTAGTACCCTGCTAAGTAG  800

seq1  CATTTATTTG-AAGGGAGTCTTATTCTACATTCCCCCTGTCTCTATTGAA  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTGAAAGGGAGTCTTATTCTACATTCCCCCTGTCTCTATTGAA  850

seq1  GACAGTTAATTGAACTT-AAGGCATCTATTAATTCAGTAATAACTGAGAG  898
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GACAGTTAATTGAACTTAAAGGCATCTATTAATTCAGTAATAACTGAGAG  900

seq1  ATCAAATTCTTGAATATAAGCTTAACAGCTTTCAAAGATGAGGACTTCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTCTTGAATATAAGCTTAACAGCTTTCAAAGATGAGGACTTCCA  950

seq1  -TTTTCATGGCTCTGGTGCAATAACCAGCTACAAATAGGAGATTCAAAGA  997
       |||||||||||||||||||  | ||||||||||||||||||||||||||
seq2  TTTTTCATGGCTCTGGTGCATAACCCAGCTACAAATAGGAGATTCAAAGA  1000

seq1  ATGGATGAAATACTAGGTG-TTCTTTTCAGCAAAGACTAAATGCTTG-TC  1045
      || |||| |||||||| || ||||||||||||||||||||||||||| ||
seq2  AT-GATG-AATACTAGTTGTTTCTTTTCAGCAAAGACTAAATGCTTGTTC  1048

seq1  TTTCCAGCTCAAGGATGAATGGAGGAAGGAAAAGTTGTA-TCTTGTGCTT  1094
      ||| |||||||  ||||||||     ||  ||||||||| ||||||||||
seq2  TTTTCAGCTCA--GATGAATG-----AGAGAAAGTTGTATTCTTGTGCTT  1091

seq1  TTATTTCTTACCTAGACTAAATCTC-TGTGATTGAATGGAGATGATGAAA  1143
      ||| ||  || ||||||| |||||| ||||||   ||| | ||||||  |
seq2  TTAATTTCTA-CTAGACT-AATCTCTTGTGAT--GATGCA-ATGATG--A  1134

seq1  GCTTGTGATCTTTTTTGGGAATGTG-AAGCCAGTT  1177
      || |||||||  |||||| |||||| |||||||||
seq2  GCCTGTGATC--TTTTGGAAATGTGAAAGCCAGTT  1167