BAC Information

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BAC

Clone NameB6Ng01-264D03
Chromosome15 (Build37)
Map Location 15,645,921 - 15,647,041
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040024, LOC100040033, LOC100040046
Downstream geneEG239341, LOC100040087, LOC624183, LOC100040119
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264D03.bB6Ng01-264D03.g
ACCGA068162GA068163
length1,1231,066
definitionB6Ng01-264D03.b B6Ng01-264D03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacgattatcaagatgatgtgtatccatgtactttgtctaattt
cacagtattatcacccataattcatctactatcacccatagctatgcacc
cagttttagtaagttatgaagatctacatgtacctaagataaccgttcaa
gcattgcctgttagatatttgcatgtgtcatctcaatggcattcaagttt
caacctgatgaacgctgaaactcatgggcacaattagtgagagattaggg
gaagctaaaagataatgacaaatcatgatggcagtgatagcttgaagaag
tcggcatcaaaatacaaggagaacaattatggtcaaattaaaaataacta
gaagatgtgtttaaacacaattgagttatttaatgagtatatttacttag
agaatagtactctgtcatacaatttcagcatatttaatacctccagggaa
aaatgttccaaaggagttttaattaatttccttcatctaatcctctctta
actctgatattcctttgccacacacattatatgactctcaaggacagagt
gagggccattgaaaagcagtgttatccaagtaaggttgttaagaatccat
ttccaagttcttcattaaagcaaatgcacttaacaccatgccattcaaaa
tccatattgcaatgcagcagcaattatataaagtatgcactgctttagtt
tgtcctcatatgctatcgttgtatttttaggaacgttagtaaggcaaaat
tccagaatgttcagttctagcttgtgaaagattgcaactctcctaacagc
ttgaaatagcaatatttcaagccattgagtatatcagcttctatatctaa
tactgagtgccaggcttgaagcatttgtaatttatctacagtttttatgt
ctctgggtcagataaagtgatagaagatttatgaggtgacatattaaaaa
gttttatgaataataatattatcctttattttttcccctagaataaatga
agtcatgtgtaggtttaagtaaccatttagagctgatttttctttaaaag
gatcatttatgggtcatttaaataacattttctagcactactcactctgc
tgtcgtaacctggtcactgtgag

gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaaccaggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccattttcccggttggggatcttcct
gagaaacaagcaataaagcttttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaatagcatacaatcagccacttttg
ggaggctttgagtaaatttgctatctacctcatcctcctcctctctccaa
gttttgaagatcatctcagaagagaagttaaaatgattataagagacaat
gtagagacctgcagcagagcaatatttcctgggctctcatcaaagaactc
acttgatatgcacccactgataagtggatattagaccagatgctcagaat
acccaagatacaatttgcaaaacacatgaaacttaagaaggaagaccaaa
gtgtggatatgttgatctttcttggaagggggaacaaaatacccatggaa
ggagttacagagacaaagtgtaaagcagagactaaaataatgatcatcca
gagactatcccagttggggatccatcccatatacaaccaccaaacccagg
tactattatggatgccagcaaaagcttgctgagaggagcctgatatacct
gtcttctgagaggctctgccgaggcctgactaatacaaaagtgaatgctc
acaaccattcattggattgagcacaaggtccccaatgaagtagctaaaga
aagtacccaaggagttgaaggtgtttgcaaccccatagaaagggacaaca
atatgaactaaccagtaacttcagagttccctgggactaaaccaccaacc
aaagaaaacacatggtgggactcatggctctagctccatatgtagcagag
gatgccctagtctttgaatggagcagtctttggtcctgtgaggttctatg
cccagtatatgggatgctggggcagagcagagtgggtaggtgggtaaaca
gggggaagggtgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_15645921_15647041
seq2: B6Ng01-264D03.b_42_1164

seq1  GAATTCAACGATTATCAAGATGATGTGTATCCATGTACTTTGTCTAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGATTATCAAGATGATGTGTATCCATGTACTTTGTCTAATTT  50

seq1  CACAGTATTATCACCCATAATTCATCTACTATCACCCATAGCTATGCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTATTATCACCCATAATTCATCTACTATCACCCATAGCTATGCACC  100

seq1  CAGTTTTAGTAAGTTATGAAGATCTACATGTACCTAAGATAACCGTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTAGTAAGTTATGAAGATCTACATGTACCTAAGATAACCGTTCAA  150

seq1  GCATTGCCTGTTAGATATTTGCATGTGTCATCTCAATGGCATTCAAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCCTGTTAGATATTTGCATGTGTCATCTCAATGGCATTCAAGTTT  200

seq1  CAACCTGATGAACGCTGAAACTCATGGGCACAATTAGTGAGAGATTAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGATGAACGCTGAAACTCATGGGCACAATTAGTGAGAGATTAGGG  250

seq1  GAAGCTAAAAGATAATGACAAATCATGATGGCAGTGATAGCTTGAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAAAAGATAATGACAAATCATGATGGCAGTGATAGCTTGAAGAAG  300

seq1  TCGGCATCAAAATACAAGGAGAACAATTATGGTCAAATTAAAAATAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCATCAAAATACAAGGAGAACAATTATGGTCAAATTAAAAATAACTA  350

seq1  GAAGATGTGTTTAAACACAATTGAGTTATTTAATGAGTATATTTACTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTGTTTAAACACAATTGAGTTATTTAATGAGTATATTTACTTAG  400

seq1  AGAATAGTACTCTGTCATACAATTTCAGCATATTTAATACCTCCAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGTACTCTGTCATACAATTTCAGCATATTTAATACCTCCAGGGAA  450

seq1  AAATGTTCCAAAGGAGTTTTAATTAATTTCCTTCATCTAATCCTCTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCCAAAGGAGTTTTAATTAATTTCCTTCATCTAATCCTCTCTTA  500

seq1  ACTCTGATATTCCTTTGCCACACACATTATATGACTCTCAAGGACAGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGATATTCCTTTGCCACACACATTATATGACTCTCAAGGACAGAGT  550

seq1  GAGGGCCATTGAAAAGCAGTGTTATCCAAGTAAGGTTGTTAAGAATCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCATTGAAAAGCAGTGTTATCCAAGTAAGGTTGTTAAGAATCCAT  600

seq1  TTCCAAGTTCTTCATTAAAGCAAATGCACTTAACACCATGCCATTCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTTCTTCATTAAAGCAAATGCACTTAACACCATGCCATTCAAAA  650

seq1  TCCATATTGCAATGCAGCAGCAATTATATAAAGTATGCACTGCTTTAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTGCAATGCAGCAGCAATTATATAAAGTATGCACTGCTTTAGTT  700

seq1  TGTCCTCATATGCTATCGTTGTATTTTTAGGAACGTTAGTAAGGCAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCATATGCTATCGTTGTATTTTTAGGAACGTTAGTAAGGCAAAAT  750

seq1  TCCAGAATGTTCAGTTCTAGCTTGTGAAAGATTGCAACTCTCCTAACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAATGTTCAGTTCTAGCTTGTGAAAGATTGCAACTCTCCTAACAGC  800

seq1  TTGAAATAGCAATATTTCAAGCCATTGAGTATATCAGCTTCTATATCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATAGCAATATTTCAAGCCATTGAGTATATCAGCTTCTATATCTAA  850

seq1  TACTGAGTGCCAGGCTTGAAGCATTTGTAATTTATCTACAGTTTTTATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGTGCCAGGCTTGAAGCATTTGTAATTTATCTACAGTTTTTATGT  900

seq1  CTCTGGGTCAGATAAAGTGATAGAAGATTTATGAGGTGACATATTAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGTCAGATAAAGTGATAGAAGATTTATGAGGTGACATATTAAAAA  950

seq1  GTTTTATGAATAATAAATATTATCC-TTATTTTTTCCCCTAGAATAAATG  999
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  GTTTTATGAATAAT-AATATTATCCTTTATTTTTTCCCCTAGAATAAATG  999

seq1  AAGTCATGTGTAGG-TTAAGTAACCA-TTAGAGCTGA-TTTTCTTTAAAA  1046
      |||||||||||||| ||||||||||| |||||||||| ||||||||||||
seq2  AAGTCATGTGTAGGTTTAAGTAACCATTTAGAGCTGATTTTTCTTTAAAA  1049

seq1  GGATCCATTTATGGTTCATTTAAAT-ACA-TTTCTAGCACTTACTCACTT  1094
      |||| ||||||||| |||||||||| ||| |||||||||| ||||||| |
seq2  GGAT-CATTTATGGGTCATTTAAATAACATTTTCTAGCAC-TACTCAC-T  1096

seq1  CTGCTGTCCTTAACTTGTCACTGTGAG  1121
      |||||||| | | || |||||||||||
seq2  CTGCTGTCGTAACCTGGTCACTGTGAG  1123


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