BAC Information

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BAC

Clone NameB6Ng01-266B02
Chromosome15 (Build37)
Map Location 98,431,161 - 98,558,707
singlet/doubletdoublet
Overlap geneAdcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11
Upstream geneD15Ertd682e, Pp11r, Rapgef3, 4930570C03Rik, Hdac7a, Vdr, Tmem106c, Col2a1, Senp1, Pfkm, Asb8, AI836003, Olfr288, LOC634104, EG629524, H1fnt, Zfp641, Olfr285, Olfr284, Olfr283, 1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik
Downstream geneArf3, 5830427D03Rik, Wnt10b, Wnt1, Ddn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266B02.bB6Ng01-266B02.g
ACCGA069557GA069558
length8771,126
definitionB6Ng01-266B02.b B6Ng01-266B02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,557,831 - 98,558,707)(98,431,161 - 98,432,279)
sequence
gaattctgcagtctcttcccctctaggaggtggggacaaagtggagggag
ggctgcaagaggaggaggaggaggagctagcgccttgaaaacccgcccat
accagtctggcctggagtgagggaacccgtcctggtcgcgtgcacccgaa
cagcctgccctggtatcctggtgctctgacccggtccaatcatgaccctg
agccctttgctcctaccactccagctgttactgctgctactgttcagtgg
ggcggtgtgccgggctgaggctgggccagaaaccgaaagtcctgtccgga
ccctccaagtggagaccctggtgaggagactgtggtgccactcccctccc
cccaccccatgtcccgccgttcccctttacggccagggatcgcggggaag
cctgggactctaaatggtcctgtgagagtgaagaggaaagaagcgaagga
actgagttgggggaaaaggtgctgggtctccagaggagcttaggaggagc
agccttgacccttgtagtctgatcgtaggtgcagccccctgaatcgtgca
cggaatctgctgccattggagacacgctccacatacactacacggtgagg
ggcttgggggtccggggcgtggcctgggaggggcggcgcccggctgaaac
acgtcagctttggcttggacacgtggcaagctatcctagagaacttgagt
cctaggatcagcccgcacgtgggggcgtcctctcgcctgcttctctttct
tccttgttttctgccgattcctctccagcgctgagaaaagaaggatagag
agagctccaagaagcgccagccccgtggggcttcctgttccttcttgccc
atggtggtggtgggtggaaggagattg
gaattctccctcccacccctaaacagaacaggagctccccccccccccag
ggcttttgtgatgcacagtccttggggacccttaacactgtgttccaaag
catcacaaggcggcaggtctaacctacaaggcactgggggtgaaggcatg
gaacaccctaactaagggaagcaacccccacctgctgacggttctcatgc
tgcaggtgcagccgcgcctggatgtaacctcgggtctcctgaaaggcttg
gcgctgagacacttcagcagggtagtgtgtgcagacaccgatggcattgg
tgcagaggaagagcaccacgttagcaccgagctgttgggaaggcggcaga
ggcagatgagtgaccacctgcccggcgcgcgcgcgcgcacacacacacac
acacacacacacacacacacacactagctctctcgggacctgcaccctgt
ttgtccctaagctgtaccatctccaggatactctgttcccccattcagat
cccagcctgcctagatcattctgtggccagaaagatgagcttttcacagc
ttcaggagcagcaacaccaaccacagccacacaggtcatgggcccagccc
tggcactctataatctcctgccccacacacacccctaacaaaagacgaat
gtcccttctgcatgtagtcctaaggaggactcaacaacaacaacgctagg
cagctctgagcttcccatcctcttccaagtgaaccaggacaggttgcttc
ctctctctaggtctccacttactcatcgatcaccccaacaggaggaggaa
tatctctaaagcctcccacagccccagcggactgaatagcagaatgattg
ctattgggttctgctgctgttggttggttggttgaatttttgagataggg
tctcactatgtaaccaagctggccttaaacctccacaaagcagtgaacct
tggcttagattcccaagcgacgggatcacaggtgtaagctaatactactg
ctgttattccaggtagcccggtttgctggccacctgcacgtctaaggatc
cggaggggaggacgcaattctacatatggactgatgatttatttttacca
gtctgtgggaccaggtaaccgtaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_98557831_98558707
seq2: B6Ng01-266B02.b_47_923 (reverse)

seq1  CCATCTCCTTCCACCCACCACCACCATGGGCAAGAAGGAACAGGAAGCCC  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCCTTCCACCCACCACCACCATGGGCAAGAAGGAACAGGAAGCCC  50

seq1  CACGGGGCTGGCGCTTCTTGGAGCTCTCTCTATCCTTCTTTTCTCAGCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGGCTGGCGCTTCTTGGAGCTCTCTCTATCCTTCTTTTCTCAGCGC  100

seq1  TGGAGAGGAATCGGCAGAAAACAAGGAAGAAAGAGAAGCAGGCGAGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGGAATCGGCAGAAAACAAGGAAGAAAGAGAAGCAGGCGAGAGGA  150

seq1  CGCCCCCACGTGCGGGCTGATCCTAGGACTCAAGTTCTCTAGGATAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCCACGTGCGGGCTGATCCTAGGACTCAAGTTCTCTAGGATAGCTT  200

seq1  GCCACGTGTCCAAGCCAAAGCTGACGTGTTTCAGCCGGGCGCCGCCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGTGTCCAAGCCAAAGCTGACGTGTTTCAGCCGGGCGCCGCCCCTC  250

seq1  CCAGGCCACGCCCCGGACCCCCAAGCCCCTCACCGTGTAGTGTATGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCACGCCCCGGACCCCCAAGCCCCTCACCGTGTAGTGTATGTGGA  300

seq1  GCGTGTCTCCAATGGCAGCAGATTCCGTGCACGATTCAGGGGGCTGCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTCTCCAATGGCAGCAGATTCCGTGCACGATTCAGGGGGCTGCACC  350

seq1  TACGATCAGACTACAAGGGTCAAGGCTGCTCCTCCTAAGCTCCTCTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATCAGACTACAAGGGTCAAGGCTGCTCCTCCTAAGCTCCTCTGGAG  400

seq1  ACCCAGCACCTTTTCCCCCAACTCAGTTCCTTCGCTTCTTTCCTCTTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCACCTTTTCCCCCAACTCAGTTCCTTCGCTTCTTTCCTCTTCAC  450

seq1  TCTCACAGGACCATTTAGAGTCCCAGGCTTCCCCGCGATCCCTGGCCGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAGGACCATTTAGAGTCCCAGGCTTCCCCGCGATCCCTGGCCGTA  500

seq1  AAGGGGAACGGCGGGACATGGGGTGGGGGGAGGGGAGTGGCACCACAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAACGGCGGGACATGGGGTGGGGGGAGGGGAGTGGCACCACAGTC  550

seq1  TCCTCACCAGGGTCTCCACTTGGAGGGTCCGGACAGGACTTTCGGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACCAGGGTCTCCACTTGGAGGGTCCGGACAGGACTTTCGGTTTCT  600

seq1  GGCCCAGCCTCAGCCCGGCACACCGCCCCACTGAACAGTAGCAGCAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGCCTCAGCCCGGCACACCGCCCCACTGAACAGTAGCAGCAGTAA  650

seq1  CAGCTGGAGTGGTAGGAGCAAAGGGCTCAGGGTCATGATTGGACCGGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGAGTGGTAGGAGCAAAGGGCTCAGGGTCATGATTGGACCGGGTC  700

seq1  AGAGCACCAGGATACCAGGGCAGGCTGTTCGGGTGCACGCGACCAGGACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACCAGGATACCAGGGCAGGCTGTTCGGGTGCACGCGACCAGGACG  750

seq1  GGTTCCCTCACTCCAGGCCAGACTGGTATGGGCGGGTTTTCAAGGCGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCCTCACTCCAGGCCAGACTGGTATGGGCGGGTTTTCAAGGCGCTA  800

seq1  GCTCCTCCTCCTCCTCCTCTTGCAGCCCTCCCTCCACTTTGTCCCCACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCTCCTCCTCCTCTTGCAGCCCTCCCTCCACTTTGTCCCCACCT  850

seq1  CCTAGAGGGGAAGAGACTGCAGAATTC  877
      |||||||||||||||||||||||||||
seq2  CCTAGAGGGGAAGAGACTGCAGAATTC  877

seq1: chr15_98431161_98432279
seq2: B6Ng01-266B02.g_67_1192

seq1  GAATTCTCCCTCCCACCCCTAAACAGAACAGGAGCTCCCCCCCCCCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTCCCACCCCTAAACAGAACAGGAGCTCCCCCCCCCCCCAG  50

seq1  GGCTTTTGTGATGCACAGTCCTTGGGGACCCTTAACACTGTGTTCCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTGTGATGCACAGTCCTTGGGGACCCTTAACACTGTGTTCCAAAG  100

seq1  CATCACAAGGCGGCAGGTCTAACCTACAAGGCACTGGGGGTGAAGGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAAGGCGGCAGGTCTAACCTACAAGGCACTGGGGGTGAAGGCATG  150

seq1  GAACACCCTAACTAAGGGAAGCAACCCCCACCTGCTGACGGTTCTCATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCCTAACTAAGGGAAGCAACCCCCACCTGCTGACGGTTCTCATGC  200

seq1  TGCAGGTGCAGCCGCGCCTGGATGTAACCTCGGGTCTCCTGAAAGGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGCAGCCGCGCCTGGATGTAACCTCGGGTCTCCTGAAAGGCTTG  250

seq1  GCGCTGAGACACTTCAGCAGGGTAGTGTGTGCAGACACCGATGGCATTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTGAGACACTTCAGCAGGGTAGTGTGTGCAGACACCGATGGCATTGG  300

seq1  TGCAGAGGAAGAGCACCACGTTAGCACCGAGCTGTTGGGAAGGCGGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGAAGAGCACCACGTTAGCACCGAGCTGTTGGGAAGGCGGCAGA  350

seq1  GGCAGATGAGTGACCACCTGCCCGGCGCGCGCGCGCGCACACACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATGAGTGACCACCTGCCCGGCGCGCGCGCGCGCACACACACACAC  400

seq1  ACACACACACACACACACACACACTAGCTCTCTCGGGACCTGCACCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACTAGCTCTCTCGGGACCTGCACCCTGT  450

seq1  TTGTCCCTAAGCTGTACCATCTCCAGGATACTCTGTTCCCCCATTCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCTAAGCTGTACCATCTCCAGGATACTCTGTTCCCCCATTCAGAT  500

seq1  CCCAGCCTGCCTAGATCATTCTGTGGCCAGAAAGATGAGCTTTTCACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCTGCCTAGATCATTCTGTGGCCAGAAAGATGAGCTTTTCACAGC  550

seq1  TTCAGGAGCAGCAACACCAACCACAGCCACACAGGTCATGGGCCCAGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAGCAGCAACACCAACCACAGCCACACAGGTCATGGGCCCAGCCC  600

seq1  TGGCACTCTATAATCTCCTGCCCCACACACACCCCTAACAAAAGACGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTCTATAATCTCCTGCCCCACACACACCCCTAACAAAAGACGAAT  650

seq1  GTCCCTTCTGCATGTAGTCCTAAGGAGGACTCAACAACAACAACGCTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTCTGCATGTAGTCCTAAGGAGGACTCAACAACAACAACGCTAGG  700

seq1  CAGCTCTGAGCTTCCCATCCTCTTCCAAGTGAACCAGGACAGGTTGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTGAGCTTCCCATCCTCTTCCAAGTGAACCAGGACAGGTTGCTTC  750

seq1  CTCTCTCTAGGTCTCCACTTACTCATCGATCACCCCAACAGGAGGAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTAGGTCTCCACTTACTCATCGATCACCCCAACAGGAGGAGGAA  800

seq1  TATCTCTAAAGCCTCCCACAG-CCCAGCGGACTGAATAGCAGAATGATTG  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATCTCTAAAGCCTCCCACAGCCCCAGCGGACTGAATAGCAGAATGATTG  850

seq1  CTATTGGGTTCTGCTGCTGTTGGTTGGTTGGTTGAATTTTTGAGATAGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGGTTCTGCTGCTGTTGGTTGGTTGGTTGAATTTTTGAGATAGGG  900

seq1  TCTCACTATGTAACCAAGCTGGCCTTAAAC--TCACAAAGCAGTGAACCT  947
      ||||||||||||||||||||||||||||||   |||||||||||||||||
seq2  TCTCACTATGTAACCAAGCTGGCCTTAAACCTCCACAAAGCAGTGAACCT  950

seq1  TGGCTTAGATTCCCAAGCGACGGGATCACAGGTGTAAGCTAATACTACTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGATTCCCAAGCGACGGGATCACAGGTGTAAGCTAATACTACTG  1000

seq1  CTGTTATTCCA-GTAG-CCGGTTTGCTGGCCACCTGCAACGTCT-AGGAT  1044
      ||||||||||| |||| |||||||||||||||||||| |||||| |||||
seq2  CTGTTATTCCAGGTAGCCCGGTTTGCTGGCCACCTGC-ACGTCTAAGGAT  1049

seq1  CCGGA-GGGAGGACGC-ATTCTACATATTGACTGATGAATTTATTTTTAC  1092
      ||||| |||||||||| ||||||||||| |||||||| ||||||||||||
seq2  CCGGAGGGGAGGACGCAATTCTACATATGGACTGATG-ATTTATTTTTAC  1098

seq1  AAGTCTGT-GGACCAGGTAACAGTACCC  1119
       ||||||| |||||||||||| ||||||
seq2  CAGTCTGTGGGACCAGGTAACCGTACCC  1126