BAC Information

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BAC

Clone NameB6Ng01-266G14
Chromosome15 (Build37)
Map Location 89,897,088 - 89,898,218
singlet/doubletsinglet
Overlap genenone
Upstream genePanx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575, Syt10
Downstream geneAlg10b, Cpne8, EG627342, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266G14.bB6Ng01-266G14.g
ACCGA069815GA069816
length4331,125
definitionB6Ng01-266G14.b B6Ng01-266G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caaatgtcacacaatggcagaaactatctgcagctggcaaaaccatggct
ctgctagagcaagaggcaaattgttgtgggtagccctggggctaattata
tttgatgctaattcctatctcctgtgaggagttttgaacaaggaatgagt
tcactcaggtgatatcctgtaaacctgcttcccaccttaatttgtaaaat
aaaggagagctgatgattgggcggataaaagggaaggtggagtggaaggt
agggagagagaagaaggagaaaatggaagagggagaggacgcagaggagg
agtaggaagaagaaaagccgagcagatgcacatggcctggagaaaccgca
agttctaaggggtctcatggaatatggtagtgctgtggtagacctgccca
atctaggcgcacagcatgtaattatattaaccg
gaattcataaagaacccgacacacacacacacacacacacacacagagag
agagagagagagagagagagagagagagagagagagagagagagagagag
agagtttaggagacataaaagcatgaaatttccattcttctggtagaggt
ggtggcttttctgtgaatgccaatagtggtgttctcatggatgtagagtc
tatggagatagttagagagatgtgtgagagtctcaggccccagtgaatat
cttgaagtcctaattctctttttcagacaaaatcagagatatcatgtgga
ctactttgccagtctgaggcttacccagcctttcttgttcctctaagtgc
atgtgaaaaagaaagaccacatcccatatcccagcttgccattactatcg
aaggtgagaaagactaagaaagctatgcctttgctttgccctttcagcaa
ggagcttcagccattttctagttctggccattggaacctgaagcaggaaa
aaaaaaaaaaaaaacagacacaatacctaacgaagaacagagtgaacttg
ctaactctaaaggacaccaaatttgataaataactcactagcttctctcc
caggtccttcatgtaaccaaagataggcttcctctcaagttctcaaagca
cacagcagatggcaaattgtgacaagaactaagaagttcttacttgtaaa
agtcaaaatcttccccctccgacattttgcgtgcaacagaaacaatctat
catgtgaagacatatgctgggacaagagaacattgatgtatgaactattt
aaacaattcagttaagaaatggaagggaagatgtcataaatcatttgtct
tttcaaactgtaaaagtcctgatgaatatacacgaatattatatcaaggg
ggaattcccactgcttatttattattctaggtcagaggattttgtttttt
agaggttaacaattgccttccatataaatcagttatttgaattatattgt
tcacaccacatatacatttcccaaatgtatataagagtggagctcatgac
aataccataagctttttctgatgcatgttatatattctgagatctctcag
ataaatgacactgaaaacaatgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89897088_89898218
seq2: B6Ng01-266G14.g_69_1193

seq1  GAATTCATAAAGAACCCGACACACACACACACACACACACACAC--AGAG  48
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  GAATTCATAAAGAACCCGACACACACACACACACACACACACACAGAGAG  50

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  100

seq1  AGAGTTTAGGAGACATAAAAGCATGAAATTTCCATTCTTCTGGTAGAGGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTAGGAGACATAAAAGCATGAAATTTCCATTCTTCTGGTAGAGGT  150

seq1  GGTGGCTTTTCTGTGAATGCCAATAGTGGTGTTCTCATGGATGTAGAGTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTTTTCTGTGAATGCCAATAGTGGTGTTCTCATGGATGTAGAGTC  200

seq1  TATGGAGATAGTTAGAGAGATGTGTGAGAGTCTCAGGCCCCAGTGAATAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGATAGTTAGAGAGATGTGTGAGAGTCTCAGGCCCCAGTGAATAT  250

seq1  CTTGAAGTCCTAATTCTCTTTTTCAGACAAAATCAGAGATATCATGTGGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGTCCTAATTCTCTTTTTCAGACAAAATCAGAGATATCATGTGGA  300

seq1  CTACTTTGCCAGTCTGAGGCTTACCCAGCCTTTCTTGTTCCTCTAAGTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTGCCAGTCTGAGGCTTACCCAGCCTTTCTTGTTCCTCTAAGTGC  350

seq1  ATGTGAAAAAGAAAGACCACATCCCATATCCCAGCTTGCCATTACTATCG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAAAGAAAGACCACATCCCATATCCCAGCTTGCCATTACTATCG  400

seq1  AAGGTGAGAAAGACTAAGAAAGCTATGCCTTTGCTTTGCCCTTTCAGCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAGAAAGACTAAGAAAGCTATGCCTTTGCTTTGCCCTTTCAGCAA  450

seq1  GGAGCTTCAGCCATTTTCTAGTTCTGGCCATTGGAACCTGAAGCAGGAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTTCAGCCATTTTCTAGTTCTGGCCATTGGAACCTGAAGCAGGAAA  500

seq1  AAAAAAAAAAAAAACAGACACAATACCTAACGAAGAACAGAGTGAACTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAACAGACACAATACCTAACGAAGAACAGAGTGAACTTG  550

seq1  CTAACTCTAAAGGACACCAAATTTGATAAATAACTCACTAGCTTCTCTCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCTAAAGGACACCAAATTTGATAAATAACTCACTAGCTTCTCTCC  600

seq1  CAGGTCCTTCATGTAACCAAAGATAGGCTTCCTCTCAAGTTCTCAAAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTTCATGTAACCAAAGATAGGCTTCCTCTCAAGTTCTCAAAGCA  650

seq1  CACAGCAGATGGCAAATTGTGACAAGAACTAAGAAGTTCTTACTTGTAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGATGGCAAATTGTGACAAGAACTAAGAAGTTCTTACTTGTAAA  700

seq1  AGTCAAAATCTTCCCCCTCCGACATTTTGCGTGCAACAGAAACAATCTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAATCTTCCCCCTCCGACATTTTGCGTGCAACAGAAACAATCTAT  750

seq1  CATGTGAAGACATATGCTGGGACAAGAGAACATTGATGTATGAACTATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAAGACATATGCTGGGACAAGAGAACATTGATGTATGAACTATTT  800

seq1  AAACAATTCAGTTAAGAAATGGAAGGGAAGATGTCATAAATCATTTGTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTCAGTTAAGAAATGGAAGGGAAGATGTCATAAATCATTTGTCT  850

seq1  TTCAAAACTGTAAAAGTCCTGATGAATATACACGAATAATTATATCAA-G  897
      ||  ||||||||||||||||||||||||||||||||| |||||||||| |
seq2  TTTCAAACTGTAAAAGTCCTGATGAATATACACGAAT-ATTATATCAAGG  899

seq1  GGGAATT-CCACTGC-TATTTATTA-TCTAGGTCAGAGGATTTTG-TTTT  943
      ||||||| ||||||| ||||||||| ||||||||||||||||||| ||||
seq2  GGGAATTCCCACTGCTTATTTATTATTCTAGGTCAGAGGATTTTGTTTTT  949

seq1  TAGAGGTTAACAATTGCTTTCAATATTAAATCAGTTAATTTGAATTATA-  992
      ||||||||||||||||| ||| ||| |||||||||| |||||||||||| 
seq2  TAGAGGTTAACAATTGCCTTCCATA-TAAATCAGTT-ATTTGAATTATAT  997

seq1  TGTTCACA-CACATATACATTT-CCAAATGTATATAAGAGGTGAGCTCAT  1040
      |||||||| ||||||||||||| |||||||||||||||||  ||||||||
seq2  TGTTCACACCACATATACATTTCCCAAATGTATATAAGAGTGGAGCTCAT  1047

seq1  GAACAATAACAATTAGGCTTTTTCTGAATGCAATGGTAATTATA-ATTCT  1089
      | |||||| ||  || |||||||||| |||| |||    ||||| |||||
seq2  G-ACAATACCA--TAAGCTTTTTCTG-ATGC-ATG----TTATATATTCT  1088

seq1  GAAGATCTCCTCAGTATAACATGAACACTGAAAACAATGGGG  1131
      | |||||| ||||| |||| ||| ||||||||||||||||||
seq2  G-AGATCT-CTCAG-ATAA-ATG-ACACTGAAAACAATGGGG  1125