BAC Information

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BAC

Clone NameB6Ng01-268M21
Chromosome15 (Build37)
Map Location 96,677,490 - 96,678,609
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem16f, D030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2, Sfrs2ip, Slc38a1, Slc38a2, LOC667941
Downstream geneLOC546651, Slc38a4, Amigo2, BC038822, LOC100043354, LOC100042774, D15Ertd682e, Pp11r, Rapgef3, 4930570C03Rik, Hdac7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268M21.bB6Ng01-268M21.g
ACCGA071567GA071568
length1,1211,191
definitionB6Ng01-268M21.b B6Ng01-268M21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaacagaggaatcttgagtggcggacaaacacttaaagaaatg
tccccaaaccaaaccaaggcaaatcaaacaaaaaacaaaaaaactgaaaa
caatcaaaaagaaaaaaaaaacaaaaagaaagaaagaaaggaaagaaatt
tggctcaggaattgaagacagagagaaaacaactcacggtgtccgctaaa
ataggaaaggaaaggtgcgagatggacagccaccaacaaggtgtggccgg
aatacatccaccaaatggaaaggttcagtcacctgcattgcctgggcaga
ggaggaaaagatagaacaggttagaccctctgctaagagaagatagagca
ggttagaccctctgctaaggggagatagagcaggttagaccctctgctaa
gggaagatagagcaggttagaccctctgctaagggaagaataaaatctag
ttggaagatgggaaagggggaaaaaaaccaaaaaaccaaacagacaaaca
aacaacaacaacccatctacgttccccaggattactcgaactccaaaggg
agctctgaagagttcagaatgggaatgagatgtcccttgagcatttggtc
acgtgttgtgtcccctgtcccaaaccctatctcctacctcaaccttccaa
ctccccttcaaccccctcccacacaaaccaaaagcaatgcacttatcagc
accaacattgctgaaagtgctaacaagatagttctcccacccatccctgg
cccatcctattaacagcagacctgtggagacaggcaagttcaatgttatg
tgcctggcactcaggggcttctgagatggaacctcttctgtttggggcat
ttgtgatttttatagaaataattgtattgagaaaaatttgtggagactta
ccagtattctgctgcttaggtgagaaactccctgaatttctctatttata
ttatgtatgagaaattggactgtgagcctctccatctgaatacagtaagc
aacttggggatgacgctttcataataaaggaataatattcttatttcaga
ggatgtccacagatttttcaatactttggatatttttatagggagtgtag
gatctagggaacatatcacta
gaattcatcatctgattcagagctaccaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgttcctactctctctccc
cactttacttctgatagcttgtcctgaatttcctctagaattttcagccc
tatcttaatcacttgataacatgtgaaaaggaacaaaagggctcctaaca
ccagaaaaaattcaaggccaaacatattccactttacttctgatagactg
tcttgaatttccttagaaagttcaagatcagacttacctcgtaaagctgt
actcactggtactctcgttccccagctgaaaagttctgaattcatacagt
tgaatccttcttaacagtctgctttacgggaacctttattaccgcgaccc
gcagttctggttctggaatgagggatcttccttgcgccagtcccgagttt
tttctcgtcccggaattcggcaccaattgttattagacgcgttctcacga
ccggccaggaaagacgcaacagaccagaatcttctgcggcaaagctttat
tgcttacatcttcaggagccagagtgcaagaagcaagagagcaagaagca
agagagagagaaaacgaaaccccgtccctcttaaggagcattctccttcg
cctcggacgtgtcactccctgattggctgcagcccatcggccgagttgac
gtcacggggaaaggcagagcacaagtagtcataagatacccttggcacat
gcgcagattatttgtttaccacttagaacacagctgtcagcgccatcttg
taacggcgaatgtgggcgcggctcccaacattttttactttgagattcag
tcatataatatggagagcgaaaccaagtaaaatcatcctgtcagcgggcg
gtggtggcgcatgctttaatccagcactcggagcagagccagcgatttct
gagttggaggcccagcctggtctacaagtggaattccaggaaccgtcaga
agctttatccatagaaaactctgtgtgtctctcgcgtagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_96677490_96678609
seq2: B6Ng01-268M21.b_50_1170

seq1  GAATTCTCAACAGAGGAATCTTGAGTGGCGGACAAACACTTAAAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACAGAGGAATCTTGAGTGGCGGACAAACACTTAAAGAAATG  50

seq1  TCCCCAAACCAAACCAAGGCAAATCAAACAAAAAACAAAAAAACTGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAACCAAACCAAGGCAAATCAAACAAAAAACAAAAAAACTGAAAA  100

seq1  CAATCAAAAAGAAAAAAAAAACAAAAAGAAAGAAAGAAAGGAAAGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAAAAGAAAAAAAAAACAAAAAGAAAGAAAGAAAGGAAAGAAATT  150

seq1  TGGCTCAGGAATTGAAGACAGAGAGAAAACAACTCACGGTGTCCGCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGGAATTGAAGACAGAGAGAAAACAACTCACGGTGTCCGCTAAA  200

seq1  ATAGGAAAGGAAAGGTGCGAGATGGACAGCCACCAACAAGGTGTGGCCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAAGGAAAGGTGCGAGATGGACAGCCACCAACAAGGTGTGGCCGG  250

seq1  AATACATCCACCAAATGGAAAGGTTCAGTCACCTGCATTGCCTGGGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATCCACCAAATGGAAAGGTTCAGTCACCTGCATTGCCTGGGCAGA  300

seq1  GGAGGAAAAGATAGAACAGGTTAGACCCTCTGCTAAGAGAAGATAGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAAAGATAGAACAGGTTAGACCCTCTGCTAAGAGAAGATAGAGCA  350

seq1  GGTTAGACCCTCTGCTAAGGGGAGATAGAGCAGGTTAGACCCTCTGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGACCCTCTGCTAAGGGGAGATAGAGCAGGTTAGACCCTCTGCTAA  400

seq1  GGGAAGATAGAGCAGGTTAGACCCTCTGCTAAGGGAAGAATAAAATCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGATAGAGCAGGTTAGACCCTCTGCTAAGGGAAGAATAAAATCTAG  450

seq1  TTGGAAGATGGGAAAGGGGGAAAAAAACCAAAAAACCAAACAGACAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGATGGGAAAGGGGGAAAAAAACCAAAAAACCAAACAGACAAACA  500

seq1  AACAACAACAACCCATCTACGTTCCCCAGGATTACTCGAACTCCAAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAACCCATCTACGTTCCCCAGGATTACTCGAACTCCAAAGGG  550

seq1  AGCTCTGAAGAGTTCAGAATGGGAATGAGATGTCCCTTGAGCATTTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGAAGAGTTCAGAATGGGAATGAGATGTCCCTTGAGCATTTGGTC  600

seq1  ACGTGTTGTGTCCCCTGTCCCAAACCCTATCTCCTACCTCAACCTTCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTTGTGTCCCCTGTCCCAAACCCTATCTCCTACCTCAACCTTCCAA  650

seq1  CTCCCCTTCAACCCCCTCCCACACAAACCAAAAGCAATGCACTTATCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTCAACCCCCTCCCACACAAACCAAAAGCAATGCACTTATCAGC  700

seq1  ACCAACATTGCTGAAAGTGCTAACAAGATAGTTCTCCCACCCATCCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACATTGCTGAAAGTGCTAACAAGATAGTTCTCCCACCCATCCCTGG  750

seq1  CCCATCCTATTAACAGCAGACCTGTGGAGACAGGCAAGTTCAATGTTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCTATTAACAGCAGACCTGTGGAGACAGGCAAGTTCAATGTTATG  800

seq1  TGCCTGGCACTCAGGGGCTTCTGAGATGGAACCTCTTCTGTTTGGGGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCACTCAGGGGCTTCTGAGATGGAACCTCTTCTGTTTGGGGCAT  850

seq1  TTGTGATTTTTATAGAAATAATTGTATTGAGAAAAATTTGTGGAGACTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTTTTATAGAAATAATTGTATTGAGAAAAATTTGTGGAGACTTA  900

seq1  CCAGTATTCTGCTGCTTAGGTGAGAAACTCCCTGAATTTCTCTATTTATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATTCTGCTGCTTAGGTGAGAAACTCCCTGAATTTCTCTATTTATA  950

seq1  TTATGTATGAGAAATTGGACTGTGAGCCTCTCCATCTGAATACAGTAAGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATGAGAAATTGGACTGTGAGCCTCTCCATCTGAATACAGTAAGC  1000

seq1  AACTTGGGGATGACGCTTTCATAATAAA-GAATAATA-TCTTATTTCAGA  1048
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  AACTTGGGGATGACGCTTTCATAATAAAGGAATAATATTCTTATTTCAGA  1050

seq1  GGATGTCCACAGATTTTTCAATACTTTGGATAATTTTATAGGGGAGTGGT  1098
      |||||||||||||||||||||||||||||||| ||||||| |||||||  
seq2  GGATGTCCACAGATTTTTCAATACTTTGGATATTTTTATA-GGGAGTGTA  1099

seq1  AGATCTA-GGAACATAATCACTA  1120
       |||||| ||||||| |||||||
seq2  GGATCTAGGGAACAT-ATCACTA  1121