BAC Information

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BAC

Clone NameB6Ng01-272D15
Chromosome15 (Build37)
Map Location 43,187,042 - 43,188,149
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039197, Angpt1, Rspo2, LOC675960, Eif3s6
Downstream geneTtc35, LOC100039288, Tmem74, LOC100039309, Trhr, LOC665041
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272D15.bB6Ng01-272D15.g
ACCGA074107GA074108
length1,111780
definitionB6Ng01-272D15.b B6Ng01-272D15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtttactcttctgctcaactcaccttctggaaataggctttt
taaaatttttatttagatatatctttatttcctagccttttcatagtagc
ccccatgttatttaaattttagctcaggattatcttaatcataaaatgag
aaatataaaaacacctagaaggcactaagttaagatatttgtaatcttac
ccagggtaaaggagcttcacagataagcatcccacttcttggccaaagga
aaactgaggcttcagaaaagctaatagcatgaactgacatctaggatgta
accatgcacactacttttgaaatccccagttctttctattttataagttt
ctgtgtccaattctgtatattgtttgacactgtagttggggggaaaaact
gtttcaagtgacaaacacgtttcaggctgttgggtgtttttaatgatatt
tttaaaagttcacaggttgacttaactatgaagcataaaaagctggatga
atgcgttctactccgtatgatttaagtacactggtgtaaactggctgcac
tgtcacgattctccttgtcagtgataactcagtcagtgtgtcaactgtgg
gttgatttttttcccctttaacctttctttgcaacaatcttatttctttg
gactatttggaaaactgttcttaccacttccagttgggtggaacattttt
tggctatgctatttgcttacaccatgaagatatttcaagcagacatgttt
tatcttctcctttcccccttcagaggcacctccctacaatttaaggttgt
taataacctcaccaaagtgacatttctaatatttatttatttatctcatc
ggaaacactgaaaggaagggcagaggctcgccaacagttctaattccaag
ccactgcaaagctatatgaaagggtgattacatactcttaatgaaattat
atcagagggagttgttatacatggagtgggaaaatctaatattcttttaa
attatgtattttttattatttttgagagtgcatacatgcatacatgccct
ttcgatcatttttactctaagatcctcccagattccacggacacctttgt
tccactcccaa

gaattccagagcaccacaggtggctcacaaccatctctaactccagtact
aagcaatctgatattctcttctggcctccacaggcactaaacactaactg
tgcatagatttacatgtgagcaaaacacccatacccataaaaataaacca
atttttaaaacattttttattctaaaaatattttcttgctgcagttacat
ctgtacatggaaatatagaaaggcataaatatgaatattatctaaaagtc
ccctgaaactttccatttagtcaaagacagagaggcaagctatgatgtca
gtatattcaattaaacatttccacatttaaaaggacaactgggaatttag
agactgccccaccctgggatccatcccataatcaatctccaaatgctgac
accattgcatacactagcaagattttgctgaaaggaccctgatatagctg
tctcttgtgaggctatgccagtgcttggcaaatacagaagtggatgctca
cagtaagctattggatggatcacagggccccctatacaggagctagagaa
agtacccaaggaactgaaggggtctgcaacactataggtggaacaacaat
atgaactaaccagtacccctagagctcgtgtctctacctgcatatgtatc
agaagatggcctcgtcagccatcactggaaagagaggccccttggtcttg
caaactttatatgccccagtacaggggaacgccagggccaagaagtggga
gtgagtgggtaggggagcagggtggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_43187042_43188149
seq2: B6Ng01-272D15.b_43_1153

seq1  GAATTCTTGTTTACTCTTCTGCTCAACTCACCTTCTGGAAATAGGCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTACTCTTCTGCTCAACTCACCTTCTGGAAATAGGCTTTT  50

seq1  TAAAATTTTTATTTAGATATATCTTTATTTCCTAGCCTTTTCATAGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTTATTTAGATATATCTTTATTTCCTAGCCTTTTCATAGTAGC  100

seq1  CCCCATGTTATTTAAATTTTAGCTCAGGATTATCTTAATCATAAAATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGTTATTTAAATTTTAGCTCAGGATTATCTTAATCATAAAATGAG  150

seq1  AAATATAAAAACACCTAGAAGGCACTAAGTTAAGATATTTGTAATCTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAAAACACCTAGAAGGCACTAAGTTAAGATATTTGTAATCTTAC  200

seq1  CCAGGGTAAAGGAGCTTCACAGATAAGCATCCCACTTCTTGGCCAAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTAAAGGAGCTTCACAGATAAGCATCCCACTTCTTGGCCAAAGGA  250

seq1  AAACTGAGGCTTCAGAAAAGCTAATAGCATGAACTGACATCTAGGATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGGCTTCAGAAAAGCTAATAGCATGAACTGACATCTAGGATGTA  300

seq1  ACCATGCACACTACTTTTGAAATCCCCAGTTCTTTCTATTTTATAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCACACTACTTTTGAAATCCCCAGTTCTTTCTATTTTATAAGTTT  350

seq1  CTGTGTCCAATTCTGTATATTGTTTGACACTGTAGTTGGGGGGAAAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCAATTCTGTATATTGTTTGACACTGTAGTTGGGGGGAAAAACT  400

seq1  GTTTCAAGTGACAAACACGTTTCAGGCTGTTGGGTGTTTTTAATGATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAAGTGACAAACACGTTTCAGGCTGTTGGGTGTTTTTAATGATATT  450

seq1  TTTAAAAGTTCACAGGTTGACTTAACTATGAAGCATAAAAAGCTGGATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGTTCACAGGTTGACTTAACTATGAAGCATAAAAAGCTGGATGA  500

seq1  ATGCGTTCTACTCCGTATGATTTAAGTACACTGGTGTAAACTGGCTGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTTCTACTCCGTATGATTTAAGTACACTGGTGTAAACTGGCTGCAC  550

seq1  TGTCACGATTCTCCTTGTCAGTGATAACTCAGTCAGTGTGTCAACTGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACGATTCTCCTTGTCAGTGATAACTCAGTCAGTGTGTCAACTGTGG  600

seq1  GTTGATTTTTTTCCCCTTTAACCTTTCTTTGCAACAATCTTATTTCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTTTTTTCCCCTTTAACCTTTCTTTGCAACAATCTTATTTCTTTG  650

seq1  GACTATTTGGAAAACTGTTCTTACCACTTCCAGTTGGGTGGAACATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTTGGAAAACTGTTCTTACCACTTCCAGTTGGGTGGAACATTTTT  700

seq1  TGGCTATGCTATTTGCTTACACCATGAAGATATTTCAAGCAGACATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATGCTATTTGCTTACACCATGAAGATATTTCAAGCAGACATGTTT  750

seq1  TATCTTCTCCTTTCCCCCTTCAGAGGCACCTCCCTACAATTTAAGGTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTCCTTTCCCCCTTCAGAGGCACCTCCCTACAATTTAAGGTTGT  800

seq1  TAATAACCTCACCAAAGTGACATTTCTAATATTTATTTATTTATCTCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACCTCACCAAAGTGACATTTCTAATATTTATTTATTTATCTCATC  850

seq1  GGAAACACTG-AAGGAAGGGCAGAGGCTCGCCAACAGTTCTAATTCCAAG  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACTGAAAGGAAGGGCAGAGGCTCGCCAACAGTTCTAATTCCAAG  900

seq1  CCACTGCAAAGCTATAATGAAA-GGTGATTACATACTCTTAATGAAATTA  948
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  CCACTGCAAAGCTAT-ATGAAAGGGTGATTACATACTCTTAATGAAATTA  949

seq1  TATCAGAGGGAGTTGTTATACAT-GAGTGGGAAAATCTAATATTCTTTTA  997
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATCAGAGGGAGTTGTTATACATGGAGTGGGAAAATCTAATATTCTTTTA  999

seq1  AA-TATGTA-TTTTTATTATTTTTGAGAGTTGCATACATGCATACATG-C  1044
      || |||||| ||||||||||||||||||| |||||||||||||||||| |
seq2  AATTATGTATTTTTTATTATTTTTGAGAG-TGCATACATGCATACATGCC  1048

seq1  CTTTCGATCATTTTTACCTCTTAGATCCTCCCAGATT-CACGGCCCACCT  1093
      |||||||||||||||| |||| ||||||||||||||| |||||  |||||
seq2  CTTTCGATCATTTTTA-CTCTAAGATCCTCCCAGATTCCACGG-ACACCT  1096

seq1  TTGTTCCACTCCCAA  1108
      |||||||||||||||
seq2  TTGTTCCACTCCCAA  1111


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