BAC Information

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BAC

Clone NameB6Ng01-272I01
Chromosome15 (Build37)
Map Location 60,709,609 - 60,855,895
singlet/doubletdoublet
Overlap geneA1bg
Upstream geneLOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048, LOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik
Downstream geneLOC100040323, Myc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272I01.bB6Ng01-272I01.g
ACCGA074313GA074314
length8341,175
definitionB6Ng01-272I01.b B6Ng01-272I01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,709,609 - 60,710,439)(60,854,706 - 60,855,895)
sequence
gaattcccccatcctgaccactgccagaatttatcatctgaccacatgcc
tttggctgttagtattatagagacacaatacattctttcttctctttctt
ctactcattaggtagttatatttgttatatttgctaggtcagggtctttt
ctagccttgttttcagatggagtcagatggagtttctttttttttttttc
cccctgagttttcgggatactgaatgctaaggatcagttgagagacagga
atgatgaagtgaccatggaagcaaagtacctttgtgtcctgtgtcaggtt
ttaggctctcctttggcaaaaaatacaaggaaggaagaagaaagaagaaa
cataaagccaacaagacatggtccatttatgaatagattccacttcacac
cagccagaatggctaagatcaaaaattcaggtgacagcagatgctggtga
ggatgtggagaaagaggtacattcttccattgttggtgggattgcaagct
ggtacaaccattctagaaatcattctggaggttcctcagaaaattagaca
tagtactaccggaagattcaacaatcccctctcctgggcatatacccaga
tgatgttccaacttgtaataaggacacatgctccactacgttcatagcag
ccttatttataatagccagaagctggaaagaaacccatatgtctcccaac
agaggaaatggatacagaaaatgtggtacatttacacatggagtactact
tctgcaattaaaacaatgaattctgaaattcctaggcaaatggatggatc
tgaaggaaatcatcctgtgtggagggtaacccca
gaattctttttcattcccccatactctccatctgaaaattagccaccatc
attgggattctataaagacaatgtttcttgaaacagtgtgtaattgattt
gacatccatagccaggctttaaaacttttatttttaattgacaatattac
ttagagaacaatgtaatattttaatccatgtttatattgcagaatgataa
ttacatctacctaataaatgtgtcatctcaaatacagccatgactttgtg
ctgaaacattcaaaagtctactcttgagaaatgttgaactgcatctttag
tgcgttgaggatgctgcaaagtcagtctctagaaccacttctctgtgtct
ggatggacctatgaagcctttgactaacactccgttgtttctattggaga
acagtgctattaatgttgcccttgatgtcccatggctatctaagatctgt
gcaaaatggaggactcccattctcccattcccatttcctttctctgactg
accatgtctggagagtgtgcttgaatatgggtaactggctttgtctgaaa
aattgcctggtacagagagagctctgcaagcactgcataactcagcacac
tggctacgaggaccaatcagtccttccaacctacatgatgttataaccaa
ttagccctttccagcgatacctctaaaagctcttatataccctatccctg
gaaaaataaagtagagtcatattgctgctgcagcagtctccggaagttct
tcctgacatattcacagttgtcacaaaccttctcacattttctgctccct
ttgtccttacaaacagggtcagaggccaaggacctccaagaagaaaggag
agccacacacttccttcctcctcaacaatttctcttcttccataaacgtt
atgaacatgacttttgtagacttttacatgttagtgagataatgtagaat
tgttcttctatcgcagttattgtgctaatatatgtccaccaggcaaatca
tatgtgttagggtgaacagtacaaagaacagcatgttgcatgacactaga
gaaatacaccaggaagagaggttatcatggttactaacaatggcatacta
ctaacagaatttataagaatggtagttcactaccaatctaagcctgactg
gagccgtctacctcccttcttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60709609_60710439
seq2: B6Ng01-272I01.b_47_880

seq1  GAATTCCCCCATCCTGACCACTGCCAGAATTTATCATCTGACCACATGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCATCCTGACCACTGCCAGAATTTATCATCTGACCACATGCC  50

seq1  TTTGGCTGTTAGTATTATAGAGACACAATACATTCTTTCTTCTCTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTGTTAGTATTATAGAGACACAATACATTCTTTCTTCTCTTTCTT  100

seq1  CTACTCATTAGGTAGTTATATTTGTTATATTTGCTAGGTCAGGGTCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCATTAGGTAGTTATATTTGTTATATTTGCTAGGTCAGGGTCTTTT  150

seq1  CTAGCCTTGTTTTCAGATGGAGTCAGATGGAGTTTCTTTTTTTTTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTTGTTTTCAGATGGAGTCAGATGGAGTTTCTTTTTTTTTTTTTC  200

seq1  CCCCTGAGTTTTCGGGATACTGAATGCTAAGGATCAGTTGAGAGACAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAGTTTTCGGGATACTGAATGCTAAGGATCAGTTGAGAGACAGGA  250

seq1  ATGATGAAGTGACCATGGAAGCAAAGTACCTTTGTGTCCTGTGTCAGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAAGTGACCATGGAAGCAAAGTACCTTTGTGTCCTGTGTCAGGTT  300

seq1  TTAGGCTCTCCTTTGGCAAAAAATACAAGGAAGGAAGAAGAAAGAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTCTCCTTTGGCAAAAAATACAAGGAAGGAAGAAGAAAGAAGAAA  350

seq1  CATAAAGCCAACAAGACATGGTCCATTTATGAATAGATTCCACTTCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGCCAACAAGACATGGTCCATTTATGAATAGATTCCACTTCACAC  400

seq1  CAGCCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGTGA  450

seq1  GGATGTGGAGAAAGAGGTACATTCTTCCATTGTTGGTGGGATTGCAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGGAGAAAGAGGTACATTCTTCCATTGTTGGTGGGATTGCAAGCT  500

seq1  GGTACAACCATTCTAGAAATCAGTCTGGAGGTTCCTCAGAAAATTAGACA  550
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGTACAACCATTCTAGAAATCATTCTGGAGGTTCCTCAGAAAATTAGACA  550

seq1  TAGTACTACCGGAAGATTCAACAAT-CCCTCTCCTGGGCATATACCCAGA  599
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGTACTACCGGAAGATTCAACAATCCCCTCTCCTGGGCATATACCCAGA  600

seq1  TGATGTTCCAACTTGTAATAAGGACACATGCTCCACTACGTTCATAGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTCCAACTTGTAATAAGGACACATGCTCCACTACGTTCATAGCAG  650

seq1  CCTTATTTATAATAGCCAGAAGCTGGAAAG-AACCCAGATGTCTCCCAAC  698
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  CCTTATTTATAATAGCCAGAAGCTGGAAAGAAACCCATATGTCTCCCAAC  700

seq1  AGAGG-AATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTAC  747
      ||||| ||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAGGAAATGGATACAGAAAATGTGGTACATTTACAC-ATGGAGTACTAC  749

seq1  -TCAGCAATTAAAAACAATGAATTCATGAAATTCTTAGGCAAATGGATGG  796
       || |||||| |||||||||||||| |||||||| |||||||||||||||
seq2  TTCTGCAATT-AAAACAATGAATTC-TGAAATTCCTAGGCAAATGGATGG  797

seq1  ATCTGAAGGATATCATCCTGTGTG--AGGTAACCCAA  831
      |||||||||| |||||||||||||   |||||||| |
seq2  ATCTGAAGGAAATCATCCTGTGTGGAGGGTAACCCCA  834

seq1: chr15_60854706_60855895
seq2: B6Ng01-272I01.g_65_1239 (reverse)

seq1  ACAAAAGAAGGGA-GTA-ACAGCTCCCAGTCAG--CTAGATATGAAAGTG  46
      ||||||||||||| ||| || ||| ||||||||   ||||| ||  ||||
seq2  ACAAAAGAAGGGAGGTAGACGGCT-CCAGTCAGGCTTAGAT-TGGTAGTG  48

seq1  -ACTACCATCTCTTATTAATCCTGTTAGTAGTAATGCCCATTTGTTAGTA  95
       |||||||| |||||| ||| ||||||||||| |||||   |||||||||
seq2  AACTACCAT-TCTTATAAATTCTGTTAGTAGT-ATGCC--ATTGTTAGTA  94

seq1  ACACAATGATAACCCTCTCTTCTTGGTGTATTTTCTCTAGTTGTTCATGC  145
        || ||||||| ||||||||| ||||||| ||||||||||   ||||||
seq2  --ACCATGATAA-CCTCTCTTCCTGGTGTA-TTTCTCTAGT--GTCATGC  138

seq1  -ACATGCTGTTCTTTGTACCTGTTCAACCCTAACAACAATATGAATTTGC  194
       ||||||||||||||||| |||||| |||||||||   ||||| ||||||
seq2  AACATGCTGTTCTTTGTA-CTGTTC-ACCCTAACA--CATATG-ATTTGC  183

seq1  CTGGTGGACATTATATTAAGCACAATTAACCTGCGATAGAAGAACAATTC  244
      |||||||||| |||||| ||||||||  | ||||||||||||||||||||
seq2  CTGGTGGACA-TATATT-AGCACAAT--AACTGCGATAGAAGAACAATTC  229

seq1  TACATTATCTCACTAACATGTAAAAGTCTACAAAAGTCATGTTCATAACG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTATCTCACTAACATGTAAAAGTCTACAAAAGTCATGTTCATAACG  279

seq1  TTTATGGAAGAAGAGAAATTGTTGAGGAGGAAGGAAGTGTGTGGCTCTCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGAAGAAGAGAAATTGTTGAGGAGGAAGGAAGTGTGTGGCTCTCC  329

seq1  TTTCTTCTTGGAGGTCCTTGGCCTCTGACCCTGTTTGTAAGGACAAAGGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTTGGAGGTCCTTGGCCTCTGACCCTGTTTGTAAGGACAAAGGG  379

seq1  AGCAGAAAATGTGAGAAGGTTTGTGACAACTGTGAATATGTCAGGAAGAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAATGTGAGAAGGTTTGTGACAACTGTGAATATGTCAGGAAGAA  429

seq1  CTTCCGGAGACTGCTGCAGCAGCAATATGACTCTACTTTATTTTTCCAGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCGGAGACTGCTGCAGCAGCAATATGACTCTACTTTATTTTTCCAGG  479

seq1  GATAGGGTATATAAGAGCTTTTAGAGGTATCGCTGGAAAGGGCTAATTGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGTATATAAGAGCTTTTAGAGGTATCGCTGGAAAGGGCTAATTGG  529

seq1  TTATAACATCATGTAGGTTGGAAGGACTGATTGGTCCTCGTAGCCAGTGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACATCATGTAGGTTGGAAGGACTGATTGGTCCTCGTAGCCAGTGT  579

seq1  GCTGAGTTATGCAGTGCTTGCAGAGCTCTCTCTGTACCAGGCAATTTTTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTATGCAGTGCTTGCAGAGCTCTCTCTGTACCAGGCAATTTTTC  629

seq1  AGACAAAGCCAGTTACCCATATTCAAGCACACTCTCCAGACATGGTCAGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAGCCAGTTACCCATATTCAAGCACACTCTCCAGACATGGTCAGT  679

seq1  CAGAGAAAGGAAATGGGAATGGGAGAATGGGAGTCCTCCATTTTGCACAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAGGAAATGGGAATGGGAGAATGGGAGTCCTCCATTTTGCACAG  729

seq1  ATCTTAGATAGCCATGGGACATCAAGGGCAACATTAATAGCACTGTTCTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGATAGCCATGGGACATCAAGGGCAACATTAATAGCACTGTTCTC  779

seq1  CAATAGAAACAACGGAGTGTTAGTCAAAGGCTTCATAGGTCCATCCAGAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGAAACAACGGAGTGTTAGTCAAAGGCTTCATAGGTCCATCCAGAC  829

seq1  ACAGAGAAGTGGTTCTAGAGACTGACTTTGCAGCATCCTCAACGCACTAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAGTGGTTCTAGAGACTGACTTTGCAGCATCCTCAACGCACTAA  879

seq1  AGATGCAGTTCAACATTTCTCAAGAGTAGACTTTTGAATGTTTCAGCACA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGTTCAACATTTCTCAAGAGTAGACTTTTGAATGTTTCAGCACA  929

seq1  AAGTCATGGCTGTATTTGAGATGACACATTTATTAGGTAGATGTAATTAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATGGCTGTATTTGAGATGACACATTTATTAGGTAGATGTAATTAT  979

seq1  CATTCTGCAATATAAACATGGATTAAAATATTACATTGTTCTCTAAGTAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGCAATATAAACATGGATTAAAATATTACATTGTTCTCTAAGTAA  1029

seq1  TATTGTCAATTAAAAATAAAAGTTTTAAAGCCTGGCTATGGATGTCAAAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCAATTAAAAATAAAAGTTTTAAAGCCTGGCTATGGATGTCAAAT  1079

seq1  CAATTACACACTGTTTCAAGAAACATTGTCTTTATAGAATCCCAATGATG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACACACTGTTTCAAGAAACATTGTCTTTATAGAATCCCAATGATG  1129

seq1  GTGGCTAATTTTCAGATGGAGAGTATGGGGGAATGAAAAAGAATTC  1190
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTAATTTTCAGATGGAGAGTATGGGGGAATGAAAAAGAATTC  1175