BAC Information

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BAC

Clone NameB6Ng01-272M24
Chromosome15 (Build37)
Map Location 24,307,647 - 24,476,823
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC624863, LOC666989
Downstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272M24.bB6Ng01-272M24.g
ACCGA074543GA074544
length1,132663
definitionB6Ng01-272M24.b B6Ng01-272M24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,475,678 - 24,476,823)(24,307,647 - 24,308,309)
sequence
gaattctattaatcattactctgaattcatttgatcgtctgaggaaatga
ttaaccgaatcatgatgtttaatattttaatctgggttaatagtcttgaa
atttctgacataaatccaggtgtctactttaatatagcaatataagaaaa
ctgtatctcacatttcgtgagaagacaggcaaatgctgatgaactcaaag
gggttgctggattctttgcatagtgattatgttgtctttgccagcggggc
ttgaattctaccaactaactcttcctaataactcttccagtatcacagta
ttaagattaagagaaaaaaaaataccatttctttaaaactattcacttac
tatttaagattataaatgtaatcatgtcttaaatacatggctattttact
aatcttgatattataattttttatagaattaaacctaaggtttacatttt
ttttttgcacaaaacagacatgatcatttctcaaaatttactaaacctgg
tatccatggtgatacaaacagaatcagagttgagtcttaacaaagaagat
ggcgtattttatttgaatagaacaattacaagttctgagttaggttatta
tacttattattatcccatcaaataatgctctttttttgagtgttcttatc
aatattttgataagtatttgtaaaatctgaacagcaataacagtcaaaca
ttaccgttttgcttttgatttaaggggaagatcaattatggctttgtgta
ttgtttcctgtcctttctatataaattttcaataaaatctgtgaaaaata
ttatgagattaaaagaaaaatctatgagtccatttccaaggcactgactc
ttcacttcaaagtactgctttgaggtttatcaaaggattgcagccttcca
ctgctctttgaaggaactctagtctaacacactgtggcaataactcttgg
tatcacactgctgagagtgagaaggagaaatacaaagttctctgcacttt
cagtaaacatcacagaatctcaccacccatgagactgtgaaagaatatac
ccactcacatgtacgagtaggattactatgggtagaagaaatcaatgttt
tcttggatacgtatgatgcactagaacctggt

gaattccaggactgaatgatcttctttcaatggtcactgtaatggaagaa
taaatttgaagacaaattgccagtaacctgctcctggtttttggattctg
agtcattatgccttcactcttcctttcaatgtgcttcacctttggtgatc
agataaattatttataggaattattattttgagaaatgaggaaatagagt
ggagagtccctgtatttttggtggtacaaaagaagcactgtagaagtcct
ctgaaatctcagctttcttttttctctttctttgtttggattttccaatg
tttttataacttattttgttcatgtttcacctctgaactcctctcagatc
ctgatatctcccaacccaaccatgcttatgctagtctctcgatctcctct
ttctctctctcaaaacaaaactataaagacggaagtgaaaatcatagcaa
acaaaacaaataagatagaaaataccatgacaagatgaaacaaaaccaaa
ataaaaattgagtctgttgagttctgtggaatgtattttgggatatatat
atacacacacacacatgtatggctaatatccatgtattaagctgaggtgc
ccaagtgggcagggaggggcctgggagggaaagtggactggggtctggtg
gtagggggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24475678_24476823
seq2: B6Ng01-272M24.b_48_1179 (reverse)

seq1  ACCAGG-TCTAGTGCATTCAATACGTACTCAAGAAACATTTGATTTCTCT  49
      |||||| ||||||||||   |||||||  |||||||   |||||||||  
seq2  ACCAGGTTCTAGTGCAT--CATACGTATCCAAGAAAACATTGATTTCTTC  48

seq1  AACCCATAGTTAATCCTACTCGTACATGTGAGTGGGTAATATTCTTTCAA  99
       |||||||| ||||||||||||||||||||||||||| |||||||||| |
seq2  TACCCATAG-TAATCCTACTCGTACATGTGAGTGGGT-ATATTCTTTC-A  95

seq1  CAGTCTCCAATGGGTGGTGAAGATTCTGTTGATGGTTTTACTGAAGGTTG  149
      |||||||  |||||||||| |||||||| |||||  ||||||||| | ||
seq2  CAGTCTC--ATGGGTGGTG-AGATTCTG-TGATG--TTTACTGAAAG-TG  138

seq1  CAGAGAACTTTGTATTTCTCCTTCTCACCTCTCAGCAGTGTTGATACCAA  199
      ||||||||||||||||||||||||||| |||||||||||| ||||||| |
seq2  CAGAGAACTTTGTATTTCTCCTTCTCA-CTCTCAGCAGTG-TGATACC-A  185

seq1  AGAGTTATTGCCACAGTGTGTTAGACTAGAGTTCCTTCAAAGAGCAGTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTATTGCCACAGTGTGTTAGACTAGAGTTCCTTCAAAGAGCAGTGG  235

seq1  AAGGCTGCAATCCTTTGATAAACCTCAAAGCAGTACTTTGAAGTGAAGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCAATCCTTTGATAAACCTCAAAGCAGTACTTTGAAGTGAAGAG  285

seq1  TCAGTGCCTTGGAAATGGACTCATAGATTTTTCTTTTAATCTCATAATAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCCTTGGAAATGGACTCATAGATTTTTCTTTTAATCTCATAATAT  335

seq1  TTTTCACAGATTTTATTGAAAATTTATATAGAAAGGACAGGAAACAATAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACAGATTTTATTGAAAATTTATATAGAAAGGACAGGAAACAATAC  385

seq1  ACAAAGCCATAATTGATCTTCCCCTTAAATCAAAAGCAAAACGGTAATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCATAATTGATCTTCCCCTTAAATCAAAAGCAAAACGGTAATGT  435

seq1  TTGACTGTTATTGCTGTTCAGATTTTACAAATACTTATCAAAATATTGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGTTATTGCTGTTCAGATTTTACAAATACTTATCAAAATATTGAT  485

seq1  AAGAACACTCAAAAAAAGAGCATTATTTGATGGGATAATAATAAGTATAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACTCAAAAAAAGAGCATTATTTGATGGGATAATAATAAGTATAA  535

seq1  TAACCTAACTCAGAACTTGTAATTGTTCTATTCAAATAAAATACGCCATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTAACTCAGAACTTGTAATTGTTCTATTCAAATAAAATACGCCATC  585

seq1  TTCTTTGTTAAGACTCAACTCTGATTCTGTTTGTATCACCATGGATACCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTTAAGACTCAACTCTGATTCTGTTTGTATCACCATGGATACCA  635

seq1  GGTTTAGTAAATTTTGAGAAATGATCATGTCTGTTTTGTGCAAAAAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGTAAATTTTGAGAAATGATCATGTCTGTTTTGTGCAAAAAAAAA  685

seq1  ATGTAAACCTTAGGTTTAATTCTATAAAAAATTATAATATCAAGATTAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAACCTTAGGTTTAATTCTATAAAAAATTATAATATCAAGATTAGT  735

seq1  AAAATAGCCATGTATTTAAGACATGATTACATTTATAATCTTAAATAGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGCCATGTATTTAAGACATGATTACATTTATAATCTTAAATAGTA  785

seq1  AGTGAATAGTTTTAAAGAAATGGTATTTTTTTTTCTCTTAATCTTAATAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATAGTTTTAAAGAAATGGTATTTTTTTTTCTCTTAATCTTAATAC  835

seq1  TGTGATACTGGAAGAGTTATTAGGAAGAGTTAGTTGGTAGAATTCAAGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATACTGGAAGAGTTATTAGGAAGAGTTAGTTGGTAGAATTCAAGCC  885

seq1  CCGCTGGCAAAGACAACATAATCACTATGCAAAGAATCCAGCAACCCCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGGCAAAGACAACATAATCACTATGCAAAGAATCCAGCAACCCCTT  935

seq1  TGAGTTCATCAGCATTTGCCTGTCTTCTCACGAAATGTGAGATACAGTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCATCAGCATTTGCCTGTCTTCTCACGAAATGTGAGATACAGTTT  985

seq1  TCTTATATTGCTATATTAAAGTAGACACCTGGATTTATGTCAGAAATTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATATTGCTATATTAAAGTAGACACCTGGATTTATGTCAGAAATTTC  1035

seq1  AAGACTATTAACCCAGATTAAAATATTAAACATCATGATTCGGTTAATCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTATTAACCCAGATTAAAATATTAAACATCATGATTCGGTTAATCA  1085

seq1  TTTCCTCAGACGATCAAATGAATTCAGAGTAATGATTAATAGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCAGACGATCAAATGAATTCAGAGTAATGATTAATAGAATTC  1132


seq1: chr15_24307647_24308309
seq2: B6Ng01-272M24.g_63_725

seq1  GAATTCCAGGACTGAATGATCTTCTTTCAATGGTCACTGTAATGGAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACTGAATGATCTTCTTTCAATGGTCACTGTAATGGAAGAA  50

seq1  TAAATTTGAAGACAAATTGCCAGTAACCTGCTCCTGGTTTTTGGATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGAAGACAAATTGCCAGTAACCTGCTCCTGGTTTTTGGATTCTG  100

seq1  AGTCATTATGCCTTCACTCTTCCTTTCAATGTGCTTCACCTTTGGTGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTATGCCTTCACTCTTCCTTTCAATGTGCTTCACCTTTGGTGATC  150

seq1  AGATAAATTATTTATAGGAATTATTATTTTGAGAAATGAGGAAATAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATTATTTATAGGAATTATTATTTTGAGAAATGAGGAAATAGAGT  200

seq1  GGAGAGTCCCTGTATTTTTGGTGGTACAAAAGAAGCACTGTAGAAGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTCCCTGTATTTTTGGTGGTACAAAAGAAGCACTGTAGAAGTCCT  250

seq1  CTGAAATCTCAGCTTTCTTTTTTCTCTTTCTTTGTTTGGATTTTCCAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATCTCAGCTTTCTTTTTTCTCTTTCTTTGTTTGGATTTTCCAATG  300

seq1  TTTTTATAACTTATTTTGTTCATGTTTCACCTCTGAACTCCTCTCAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAACTTATTTTGTTCATGTTTCACCTCTGAACTCCTCTCAGATC  350

seq1  CTGATATCTCCCAACCCAACCATGCTTATGCTAGTCTCTCGATCTCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATCTCCCAACCCAACCATGCTTATGCTAGTCTCTCGATCTCCTCT  400

seq1  TTCTCTCTCTCAAAACAAAACTATAAAGACGGAAGTGAAAATCATAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCTCAAAACAAAACTATAAAGACGGAAGTGAAAATCATAGCAA  450

seq1  ACAAAACAAATAAGATAGAAAATACCATGACAAGATGAAACAAAACCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAATAAGATAGAAAATACCATGACAAGATGAAACAAAACCAAA  500

seq1  ATAAAAATTGAGTCTGTTGAGTTCTGTGGAATGTATTTTGGGATATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTGAGTCTGTTGAGTTCTGTGGAATGTATTTTGGGATATATAT  550

seq1  ATACACACACACACATGTATGGCTAATATCCATGTATTAAGCTGAGGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACACATGTATGGCTAATATCCATGTATTAAGCTGAGGTGC  600

seq1  CCAAGTGGGCAGGGAGGGGCCTGGGAGGGAAAGTGGACTGGGGTCTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGGGCAGGGAGGGGCCTGGGAGGGAAAGTGGACTGGGGTCTGGTG  650

seq1  GTAGGGGGAGAGG  663
      |||||||||||||
seq2  GTAGGGGGAGAGG  663


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