BAC Information

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BAC

Clone NameB6Ng01-273G10
Chromosome15 (Build37)
Map Location 66,542,076 - 66,720,524
singlet/doubletdoublet
Overlap geneTg, Sla
Upstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1
Downstream geneWisp1, Ndrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273G10.bB6Ng01-273G10.g
ACCGA074983GA074984
length1,125405
definitionB6Ng01-273G10.b B6Ng01-273G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,542,076 - 66,543,165)(66,720,114 - 66,720,524)
sequence
gaattctcctcacactatgtctcataagtctttgccggccatacatccct
caggaaaaaggggagcacaaaatggcaccaaaactctgggttccagcctc
ataaatgtgtgtgtccttttgacatcactctgacttgatgtattccagag
caatatgtatgtgatgacaaaacagataaagccctcttagctggacttct
acaaaactgtgccctacaggtctgccaggaaggagagtccctatggcttg
agttcctgtggccagtttcataagccctgttacttaggagtcctcataga
ggacaaactttttacccagaggtcagttcttccatgacatttattgaatt
cttataaccaagacactggggttctacaaggctataagtgtgcttgaggt
catagagctagtgagaaaatgtgacatcaggatgtgagctgaggtctggc
tccagagctagtatgctttgtcccgtggcctagtgtctctgtgtcttcag
tgcctacagatgccaaacttgaggatttgatttctctgtgaagacttggc
cagtctgctgcctacattgccgtggtttattcagagaactcacctgagcc
tgatcaggggccagttagtcaagtttatcttctctgagctttagatccag
tcctaattatgtccttgctgacccatgctgtgcttctgtgaaccatacca
gatatctaaatagattttacaatcttgacacactgtcctaattccccagg
gctagacatccagctattcatctacccatctctgaatctctgtcactgtg
cccagattaagggttacatatgatgggtgcattccccctttaccctggag
ggcaataggcacatgcatagccattgtcagatacatgcctgttttaaaca
ttaaaccctcaggcttccttttacaacatttcttaaaactctgaaattgg
atacatagaaagttataccaccaggaacaatctgaaatccccaaattaat
tttacttggccccctctgcctctgcctgggcagtgaaacttccttcattg
acgacccccagcgcgcctggttaagaatccccattcatcaaggaatcctc
cgaaatagactctctaaaacagaga
ctgcttcctgacactttcagctgggtggccttggagaactcacatgagtt
ctctgtgctctggcttccttcttgtggctcctggccctgagaaagtggag
tgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtggtag
gggagattaacgcagagcacatgctcagtatgccccttctctaacccctg
cttcagaatgttctccatctttttggcccctgtcctggtaatactccctt
ggtgggaagctgacctagggcatttctgtgccccattcgctcatctctcc
attctttttttggtcccaaaaggattgtgtttgcctgacccctagtttat
ttcaaagctctagcttctacttcatctcataaaaggtatctgtactggct
gccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66542076_66543165
seq2: B6Ng01-273G10.b_38_1162

seq1  GAATTCTCCTCACACTATGTCTCATAAGTCTTTG-TGGCCATACATCCCT  49
      ||||||||||||||||||||||||||||||||||  ||||||||||||||
seq2  GAATTCTCCTCACACTATGTCTCATAAGTCTTTGCCGGCCATACATCCCT  50

seq1  CAGGAAAAAGGGGAGCACAAAATGGCACCAAAACTCTGGGTTCCAGCCTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAAAGGGGAGCACAAAATGGCACCAAAACTCTGGGTTCCAGCCTC  100

seq1  ATAAATGTGTGTGTCCTTTTGACATCACTCTGACTTGATGTATTCCAGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTGTGTGTCCTTTTGACATCACTCTGACTTGATGTATTCCAGAG  150

seq1  CAATATGTATGTGATGACAAAACAGATAAAGCCCTCTTAGCTGGACTTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGTATGTGATGACAAAACAGATAAAGCCCTCTTAGCTGGACTTCT  200

seq1  ACAAAACTGTGCCCTACAGGTCTGCCAGGAAGGAGAGTCCCTATGGCTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTGTGCCCTACAGGTCTGCCAGGAAGGAGAGTCCCTATGGCTTG  250

seq1  AGTTCCTGTGGCCAGTTTCATAAGCCCTGTTACTTAGGAGTCCTCATAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTGTGGCCAGTTTCATAAGCCCTGTTACTTAGGAGTCCTCATAGA  300

seq1  GGACAAACTTTTTACCCAGAGGTCAGTTCTTCCATGACATTTATTGAATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACTTTTTACCCAGAGGTCAGTTCTTCCATGACATTTATTGAATT  350

seq1  CTTATAACCAAGACACTGGGGTTCTACAAGGCTATAAGTGTGCTTGAGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAACCAAGACACTGGGGTTCTACAAGGCTATAAGTGTGCTTGAGGT  400

seq1  CATAGAGCTAGTGAGAAAATGTGACATCAGGATGTGAGCTGAGGTCTGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGCTAGTGAGAAAATGTGACATCAGGATGTGAGCTGAGGTCTGGC  450

seq1  TCCAGAGCTAGTATGCTTTGTCCCGTGGCCTAGTGTCTCTGTGTCTTCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGCTAGTATGCTTTGTCCCGTGGCCTAGTGTCTCTGTGTCTTCAG  500

seq1  TGCCTACAGATGCCAAACTTGAGGATTTGATTTCTCTGTGAAGACTTGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACAGATGCCAAACTTGAGGATTTGATTTCTCTGTGAAGACTTGGC  550

seq1  CAGTCTGCTGCCTACATTGCCGTGGTTTATTCAGAGAACTCACCTGAGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGCTGCCTACATTGCCGTGGTTTATTCAGAGAACTCACCTGAGCC  600

seq1  TGATCAGGGGCCAGTTAGTCAAGTTTATCTTCTCTGAGCTTTAGATCCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGGGGCCAGTTAGTCAAGTTTATCTTCTCTGAGCTTTAGATCCAG  650

seq1  TCCTAATTATGTCCTTGCTGACCCATGCTGTGCTTCTGTGAACCATACCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATTATGTCCTTGCTGACCCATGCTGTGCTTCTGTGAACCATACCA  700

seq1  GATATCTAAATAGATTTTACAATCTTGACACACTGTCCTAATTCCCCAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTAAATAGATTTTACAATCTTGACACACTGTCCTAATTCCCCAGG  750

seq1  GCTAGACATCCAGCTATTCATCTACCCATCTCTGAATCTCTGTCACTGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACATCCAGCTATTCATCTACCCATCTCTGAATCTCTGTCACTGTG  800

seq1  -CCAGATTAAGGGTTACATATGATGGGTGCATTCCCC--TTACCCTGGAG  846
       ||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  CCCAGATTAAGGGTTACATATGATGGGTGCATTCCCCCTTTACCCTGGAG  850

seq1  GGCAATAGGCACATGCATAGCCATTGTCAGATACATG-CTGTTTT-AACA  894
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  GGCAATAGGCACATGCATAGCCATTGTCAGATACATGCCTGTTTTAAACA  900

seq1  TT-AACCCTCAGGCTTCC-TTTACAACATT--CTAAAACTCTGAA--TTG  938
      || ||||||||||||||| |||||||||||   ||||||||||||  | |
seq2  TTAAACCCTCAGGCTTCCTTTTACAACATTTCTTAAAACTCTGAAATTGG  950

seq1  ATACATAGAAAG-TATACCAGCA-GAAC-ATCTG-AATCCCCAAATTAAT  984
      |||||||||||| ||||||| || |||| ||||| |||||||||||||| 
seq2  ATACATAGAAAGTTATACCACCAGGAACAATCTGAAATCCCCAAATTAA-  999

seq1  TTTTACTTG--CCCCTCTG-CTCTGC--TGGCAGTG-AACTT-CTTCA-T  1026
      |||||||||  |||||||| ||||||   ||||||| ||||| ||||| |
seq2  TTTTACTTGGCCCCCTCTGCCTCTGCCTGGGCAGTGAAACTTCCTTCATT  1049

seq1  GACGA-CCCCAGCGC----TGTTAAG-ATCCCCA-TCATC-AGGAATCCT  1068
      ||||| |||||||||     |||||| ||||||| ||||| |||||||||
seq2  GACGACCCCCAGCGCGCCTGGTTAAGAATCCCCATTCATCAAGGAATCCT  1099

seq1  TCG-AATAGACTCT---AAACAGAGA  1090
       || ||||||||||   |||||||||
seq2  CCGAAATAGACTCTCTAAAACAGAGA  1125

seq1: chr15_66720114_66720524
seq2: B6Ng01-273G10.g_67_477 (reverse)

seq1  GTGGCAGCCAGTACAGATACCTTTTCTGAGATAAAGTAGAAAGCAGAGCT  50
      ||||||||||||||||||||||||| |||||| ||||||||   ||||||
seq2  GTGGCAGCCAGTACAGATACCTTTTATGAGATGAAGTAGAAGCTAGAGCT  50

seq1  TTGAAAGAAACAAGGGGACAGGCAAACACAGTCCTTCTGGGACCTGTATA  100
      |||||| |||| ||||| |||||||||||| ||||| |||||||   | |
seq2  TTGAAATAAACTAGGGGTCAGGCAAACACAATCCTTTTGGGACCAAAAAA  100

seq1  TGTGTGGAGGGCTGAGGGAATGGGGCACAGAAATGCCCTAGGTCAGCTTC  150
       |  ||||| | |||| |||||||||||||||||||||||||||||||||
seq2  AGAATGGAGAGATGAGCGAATGGGGCACAGAAATGCCCTAGGTCAGCTTC  150

seq1  CCACCATGGGAGTATTACCAGGACAGGGGCCAAAAAGATGGAGAACATTC  200
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAGGGAGTATTACCAGGACAGGGGCCAAAAAGATGGAGAACATTC  200

seq1  TGAAGCAGGGGTTAGAGAAGGGGCCTACTGAGCATGTGCTCTGCGTTACT  250
      |||||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  TGAAGCAGGGGTTAGAGAAGGGGCATACTGAGCATGTGCTCTGCGTTAAT  250

seq1  CTCGCCTACAAGTGTAACACACACACACACACACACACACACACACACAC  300
      ||| ||||| | | | ||||||||||||||||||||||||||||||||||
seq2  CTCCCCTACCACTCTCACACACACACACACACACACACACACACACACAC  300

seq1  ACTCACTCCACTTTCTCAGGGCCAGGAGCCACAAGAAGGAAGCCAGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCCACTTTCTCAGGGCCAGGAGCCACAAGAAGGAAGCCAGAGCA  350

seq1  CAGAGAACTCATGTGAGTTCTCCAAGGCCACCCAGCTGAAAGTGTCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACTCATGTGAGTTCTCCAAGGCCACCCAGCTGAAAGTGTCAGGA  400

seq1  AGCAGGAATTC  411
      |||||||||||
seq2  AGCAGGAATTC  411