BAC Information

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BAC

Clone NameB6Ng01-273K16
Chromosome15 (Build37)
Map Location 38,926,148 - 38,927,320
singlet/doubletsinglet
Overlap geneSlc25a32
Upstream geneEdd1, Odf1, LOC382986, LOC667563, Klf10, Azin1, Siah1-ps2, Atp6v1c1, Baalc, TOB3L, Fzd6, LOC636952, Cthrc1
Downstream geneWdsof1, LOC671215, Rims2, Tm7sf4, Dpys, Lrp12, LOC100039130, LOC670013
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273K16.bB6Ng01-273K16.g
ACCGA075182GA075183
length1,1741,165
definitionB6Ng01-273K16.b B6Ng01-273K16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagtagtactccattgtgtaaacgtacc
acattttctgtatccattcctctgttgaaggacatctgagttctttccag
cttctggctatcataaataaggcagctatgaacacagtggagcatgtgtc
cttgttatacattggagttttttttgttttgttttgttttgttttttttg
ctggttcaactggaggtcagcatgtaaaagaatgcaaatcaattctttct
tatctccttgtacaaagttcaagttaaagtggatcaaggacctccacata
aaaccagatacactgaaactaatagaggagaaagtgggggaaagcctcga
acacatgggcataaggaaacattcctgaacagaacatcaatggcttatgc
tctaagatcaagaatcaacaaatgagacatcataaaattgcaaagcttct
ataaggcaaaggacactgtcaataagacaagacgggaaccaacagattgg
gaaaggatctttaccaatcctacatccaatagaggggtaatatccaatat
atacaaaaaaactcaagaagttatactccagagactcaaataactctatt
aaaaatgaggtacagagctaaacaaagaattcacaactgaggaatattga
atggctgagaagcacctaaagaaatgtttaacatccttagtcatcagggg
aatgaaaatcaaaacaaccctgagattccacctcacaccagtcagaatgg
ctaagatcaaaaactcagtgacagcagatgctggagaagatgtggagaaa
aaggaacactcttccactactggtgggattgcaagctggtacaaccaccc
tggaaatcaatctggtggtttctcagaaaattggacatagtactaccaga
ggacccagctataccactcctggacatatgcccagaagatgctcaacata
taacaggacacatgctcatgatctttttgctcagctcaaatagaaactct
agcaaatagacatttgtacaagaagatctgatgactaactgtcccaaact
catagtggcagaaaatagtctcaaggtagttctgactttaaatatgtact
gtgaccatgttaacgatagtctactcatgccagataatattagcttaact
aatctcacatgtttaaaggccttg
gaattcctggaaatattgattcattgtccccaaatttcaaagagttatat
gccaggaatttgtaaatgctgaaaaacttgctttttgttacagtgtatcg
tgattttaaaatgtatcaattttgctgaataaacaaacatacttaaaaaa
taaaggtaaaggatattatagcaaacaccatttttgtaaatataaattat
cttttcattttttattttaaaaacaattccatttgcaaaatataaaaaaa
taggcttattttcaaagaaccctttaaatacagctttgattataatgatt
tatttacaaaaaatagaggctagtgcaacagtactgacagttgctcatca
gaagagttagtattagtctagcatccttcgggagcaggccttttacctgg
agatctacaatgacttagaaatcaaaccagtaatggccacagacaaatgt
aatttgtatttcaacctgaatttgagcaaccaatgcagacaaataattat
ttggaatctggaaccataaatctaaaaatgaagggaaactagaatgcttg
tttctattcagtttttcaacaagcttacatcaaacattccatctctgtga
aacatgagccagcatttctgatgagtgatttgtagccacacatgctaaat
aaaggcttcaccggatcctgcaagttcaggttttatacaccctaaccaca
cactaagtgtttatggccaaaatacaaggtctgcgtccagaatctcactg
taaataattaagcaatggaatggcaaaaggtgctagatatttctcagaga
aatccatgacttctccaatttctgtacttagtatgttccagttggattaa
aactaaagcacgtctataacagacttctttctaacaaaaatatccccatt
caaaatgggctagagttagataataccttattataagttccccaagttta
atttacccttgaaatatagtcattcttgtaagaagccagttccttgctat
tgcacatgggtcagttttaaagccattccaggcaagaggagttcagaaaa
agacattcatcaattattacaatattgcaatgagcttctccctgaataac
aatgagattctgtaacattttcgcgtggctatcagttgcaacgcttcagc
agatggtacccactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_38926148_38927320
seq2: B6Ng01-273K16.g_67_1231

seq1  GAATTCCTGGAAATATTGATTCATTGTCCCCAAATTTCAAAGAGTTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAAATATTGATTCATTGTCCCCAAATTTCAAAGAGTTATAT  50

seq1  GCCAGGAATTTGTAAATGCTGAAAAACTTGCTTTTTGTTACAGTGTATCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAATTTGTAAATGCTGAAAAACTTGCTTTTTGTTACAGTGTATCG  100

seq1  TGATTTTAAAATGTATCAATTTTGCTGAATAAACAAACATACTTAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAAAATGTATCAATTTTGCTGAATAAACAAACATACTTAAAAAA  150

seq1  TAAAGGTAAAGGATATTATAGCAAACACCATTTTTGTAAATATAAATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTAAAGGATATTATAGCAAACACCATTTTTGTAAATATAAATTAT  200

seq1  CTTTTCATTTTTTATTTTAAAAACAATTCCATTTGCAAAATATAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTTTTTATTTTAAAAACAATTCCATTTGCAAAATATAAAAAAA  250

seq1  TAGGCTTATTTTCAAAGAACCCTTTAAATACAGCTTTGATTATAATGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTATTTTCAAAGAACCCTTTAAATACAGCTTTGATTATAATGATT  300

seq1  TATTTACAAAAAATAGAGGCTAGTGCAACAGTACTGACAGTTGCTCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACAAAAAATAGAGGCTAGTGCAACAGTACTGACAGTTGCTCATCA  350

seq1  GAAGAGTTAGTATTAGTCTAGCATCCTTCGGGAGCAGGCCTTTTACCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTTAGTATTAGTCTAGCATCCTTCGGGAGCAGGCCTTTTACCTGG  400

seq1  AGATCTACAATGACTTAGAAATCAAACCAGTAATGGCCACAGACAAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTACAATGACTTAGAAATCAAACCAGTAATGGCCACAGACAAATGT  450

seq1  AATTTGTATTTCAACCTGAATTTGAGCAACCAATGCAGACAAATAATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTATTTCAACCTGAATTTGAGCAACCAATGCAGACAAATAATTAT  500

seq1  TTGGAATCTGGAACCATAAATCTAAAAATGAAGGGAAACTAGAATGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATCTGGAACCATAAATCTAAAAATGAAGGGAAACTAGAATGCTTG  550

seq1  TTTCTATTCAGTTTTTCAACAAGCTTACATCAAACATTCCATCTCTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTCAGTTTTTCAACAAGCTTACATCAAACATTCCATCTCTGTGA  600

seq1  AACATGAGCCAGCATTTCTGATGAGTGATTTGTAGCCACACATGCTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGCCAGCATTTCTGATGAGTGATTTGTAGCCACACATGCTAAAT  650

seq1  AAAGGCTTCACCGGATCCTGCAAGTTCAGGTTTTATACACCCTAACCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTTCACCGGATCCTGCAAGTTCAGGTTTTATACACCCTAACCACA  700

seq1  CACTAAGTGTTTATGGCCAAAATACAAGGTCTGCGTCCAGAATCTCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGTGTTTATGGCCAAAATACAAGGTCTGCGTCCAGAATCTCACTG  750

seq1  TAAATAATTAAGCAATGGAATGGCAAAAGGTGCTAGATATTTCTCAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATTAAGCAATGGAATGGCAAAAGGTGCTAGATATTTCTCAGAGA  800

seq1  AATCCATGACTTCTCCAATTTCTGTACTTAGTATGTTCCAGTTGGATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATGACTTCTCCAATTTCTGTACTTAGTATGTTCCAGTTGGATTAA  850

seq1  AACTAAAGCACGTCTATAACAGACTTCTTTCTAACAAAAATATCCCCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAGCACGTCTATAACAGACTTCTTTCTAACAAAAATATCCCCATT  900

seq1  CAAAATGGGCTAGAGTTAGATAATACCTTATTATAAGTTCCCCAAGTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGGCTAGAGTTAGATAATACCTTATTATAAGTTCCCCAAGTTTA  950

seq1  ATTTACCCTTGAAATATAGTCATTCTTGTAAGAAGCCAGTTCCTTGCTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCCTTGAAATATAGTCATTCTTGTAAGAAGCCAGTTCCTTGCTAT  1000

seq1  TGCACAT-GGTCAGTTTTAAAGCCAATCCAGGCAAGA-GAGTTCAGAAAA  1048
      ||||||| ||||||||||||||||| ||||||||||| ||||||||||||
seq2  TGCACATGGGTCAGTTTTAAAGCCATTCCAGGCAAGAGGAGTTCAGAAAA  1050

seq1  AAAGAACATTCATCAAATTATTTACAAATATTGCAAATGAGCTTCTCCCT  1098
      |    ||||||||| ||||| |||| |||||||| |||||||||||||||
seq2  A---GACATTCATC-AATTA-TTAC-AATATTGC-AATGAGCTTCTCCCT  1093

seq1  GAATAACAAAATGGAAGATCCTGT-ACATTTTCGCCGTGGCTATCAGTTG  1147
      |||||||  ||||  |||| |||| ||||||||| |||||||||||||||
seq2  GAATAAC--AATG--AGATTCTGTAACATTTTCG-CGTGGCTATCAGTTG  1138

seq1  CAACG--TCAGGCAGATGGTACCCACTC  1173
      |||||  ||| |||||||||||||||||
seq2  CAACGCTTCA-GCAGATGGTACCCACTC  1165