BAC Information

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BAC

Clone NameB6Ng01-274K20
Chromosome15 (Build37)
Map Location 21,583,653 - 21,697,638
singlet/doubletdoublet
Overlap genenone
Upstream geneAcot10, LOC100040302, Cdh12
Downstream geneLOC100040351, EG545091
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274K20.bB6Ng01-274K20.g
ACCGA075918GA075919
length1,1481,164
definitionB6Ng01-274K20.b B6Ng01-274K20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,696,465 - 21,697,638)(21,583,653 - 21,584,825)
sequence
gaattctgataaataatgaagaaaagttgatatgtactggtcatggatgg
gacaacaactggatttcccagattttccactgggcgtctctaattattga
gctatacgtacatatgtgtgtgtgtatatatatatacatgcatatatgtg
tgtctatataaatgtataggtatatgtagatattgatattaatgacatgc
tatgttgatctatatagttactgtatatactttatgtaatatataaatta
taatgctagtggtatttactatccataatacacacatgtatatattattt
gaaaatattctgatatatctatatagaaaatacttgttatttattgaaaa
ttcaactttaaatatcctatattttacttggatactcaaatgaataagta
ttaaaaatttagtaatatctgtttagtactttgtagttttcagaaatttg
ctaatgtagtttttaaaatatatgatagtgtatcagtatattagctttct
aaaaatgtctgaaactttctacttatttgtttataaagtcaagtgggaat
cccttattgatttcttcctttgacaacagaatataataaagcaaacagct
tgatttttgaaagctacaattctttaaaattcatagtaactcataaatta
cagtggcttgaagtggatattatagtagaaaaacgtgtctcagcaagggc
atggttcctttcattaggagccaaacatcacaataggaaaagatgaatgg
tttgccatgaaatatggtatgatagtctatatggaaacatcattatgaca
ggattacagagtagagaacatgactcccagagtaggaaggagggtttgag
actggaaaacctggtgccatttggaaacaatgacaaatgagtctttagtg
tattacctctttggaattttcaagattttacagtgaataatgattgtgca
tttcaagagaaataattagacttgtattttggaaatgtgattgatatgta
gcttactagagtcccagttatctgaatcatagcaaaaataatttatcctt
cagctttttgctacacctcatttaaaaatgatttattaaatacaatacag
gtgtctagatagctcattaataagtctggtccagagaaccttgacagc

gaattcttgactgtatttatcttcaggggcttttccaaagatggacatct
ttagatatgtctgtaatggcttctacagggagaattcagtggtgaaggaa
ggatagccctgattctgggcagcactgtggcacaagcaaagctccaacac
aaaagataaaaggaaaaactccaaaaactgctaacccctttctttccctt
ccgatacacttcatgcataacaagctttttgattctgccacaactgctga
gagtcaagcataccatcaaacaattgtaatcatgaggatatagcaaaact
ttgagccacaagcaaaagttcttcctttacattgcttaatgtcaagcatt
tgtcatgtcaacaagaacagcaatagtgatgtagataaatgtgacaaacc
agatgtgatctgtttaactcaaagactaagctattcatatatgctaaaat
tatgcatcatatttatacataacaattctaaattctaatatgtaatacag
gatatcaaaatatacagtttatgatttttatttaaatttcagaccggcag
acttttttctaatggtatatcttattttagaaagtgcacacttaataaat
gaagaaaaaaacacacaatatgggtattttggaaatcgtaattatcatat
taaatttttctcaggatatttgacatcaaaatcaacattatcataattta
tcttaagtaatcatctttaaagagaaagagtatgttagaaaatgggaaag
attttaggtgtgcagccattaattatattaataatggagtgtccaataat
aaaatagtgaggtattaaccatttaaattaaggaaaattatatgtgggga
atagaggttatctgaatgtaatattaaaggtgatgatatttaacattttc
agattatactgccaaatacctaaacttaggcatgcattaaataacaagaa
tctttatctcttcctgtgtttctttctttctctatcatctttacatacag
cagtgaagcaagttcttttacagagagatatttaaaaggtctttcagagg
ccacatagctcagtgtttgacagagctctacttggccattcatctctgac
atcatttagagtctttgatgatcttgtgaatgaactgagacctcagaaaa
atgatctctcaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_21696465_21697638
seq2: B6Ng01-274K20.b_44_1191 (reverse)

seq1  GCTGTCAA-GTTCTCCTTCTTGTGGAACAAGACTTATATAAATAGAGCTA  49
      |||||||| ||||||       ||| || |||||||| |||   ||||||
seq2  GCTGTCAAGGTTCTC-------TGG-ACCAGACTTAT-TAA--TGAGCTA  39

seq1  TCTAGACACCTGTATTGTATTTTTATTAAAATCATTTTTTAAATGA-GTG  98
      |||||||||||||||||||  |||| | |||||| ||||||||||| |||
seq2  TCTAGACACCTGTATTGTA--TTTAAT-AAATCA-TTTTTAAATGAGGTG  85

seq1  TAACCAAAAAGGCTGAAAGAATAAAATTATTTTTGCTTATTGAATCAGAT  148
      || |  |||| |||||| ||   ||||||||||||||   ||| ||||||
seq2  TAGC--AAAAAGCTGAAGGA--TAAATTATTTTTGCT--ATGATTCAGAT  129

seq1  AACTGGGGACTCTAGTTAAGCTACATATTCAATCACCTTTTCCCAAAAAT  198
      |||| |||||||||| ||||||||||| |||||||| |||   | |||||
seq2  AACT-GGGACTCTAG-TAAGCTACATA-TCAATCACATTT---CCAAAAT  173

seq1  ACAAGTCTAATTATTTCTCTTGAAATGCACAATCATTATTCACTGTAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCTAATTATTTCTCTTGAAATGCACAATCATTATTCACTGTAAAA  223

seq1  TCTTTGAAAATTCCAAAGAGGTAATACACTAAAGACTCATTTGTCATTGT  298
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-TTGAAAATTCCAAAGAGGTAATACACTAAAGACTCATTTGTCATTGT  272

seq1  TTCCAAATGGCACCAGGTTTTCCAGTCTCAAACCCTCCTTCCTACTCTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATGGCACCAGGTTTTCCAGTCTCAAACCCTCCTTCCTACTCTGG  322

seq1  GAGTCATGTTCTCTACTCTGTAATCCTGTCATAATGATGTTTCCATATAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATGTTCTCTACTCTGTAATCCTGTCATAATGATGTTTCCATATAG  372

seq1  ACTATCATACCATATTTCATGGCAAACCATTCATCTTTTCCTATTGTGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCATACCATATTTCATGGCAAACCATTCATCTTTTCCTATTGTGAT  422

seq1  GTTTGGCTCCTAATGAAAGGAACCATGCCCTTGCTGAGACACGTTTTTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTCCTAATGAAAGGAACCATGCCCTTGCTGAGACACGTTTTTCT  472

seq1  ACTATAATATCCACTTCAAGCCACTGTAATTTATGAGTTACTATGAATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAATATCCACTTCAAGCCACTGTAATTTATGAGTTACTATGAATTT  522

seq1  TAAAGAATTGTAGCTTTCAAAAATCAAGCTGTTTGCTTTATTATATTCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATTGTAGCTTTCAAAAATCAAGCTGTTTGCTTTATTATATTCTG  572

seq1  TTGTCAAAGGAAGAAATCAATAAGGGATTCCCACTTGACTTTATAAACAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAAGGAAGAAATCAATAAGGGATTCCCACTTGACTTTATAAACAA  622

seq1  ATAAGTAGAAAGTTTCAGACATTTTTAGAAAGCTAATATACTGATACACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAGAAAGTTTCAGACATTTTTAGAAAGCTAATATACTGATACACT  672

seq1  ATCATATATTTTAAAAACTACATTAGCAAATTTCTGAAAACTACAAAGTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATATTTTAAAAACTACATTAGCAAATTTCTGAAAACTACAAAGTA  722

seq1  CTAAACAGATATTACTAAATTTTTAATACTTATTCATTTGAGTATCCAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAGATATTACTAAATTTTTAATACTTATTCATTTGAGTATCCAAG  772

seq1  TAAAATATAGGATATTTAAAGTTGAATTTTCAATAAATAACAAGTATTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATAGGATATTTAAAGTTGAATTTTCAATAAATAACAAGTATTTT  822

seq1  CTATATAGATATATCAGAATATTTTCAAATAATATATACATGTGTGTATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAGATATATCAGAATATTTTCAAATAATATATACATGTGTGTATT  872

seq1  ATGGATAGTAAATACCACTAGCATTATAATTTATATATTACATAAAGTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAGTAAATACCACTAGCATTATAATTTATATATTACATAAAGTAT  922

seq1  ATACAGTAACTATATAGATCAACATAGCATGTCATTAATATCAATATCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTAACTATATAGATCAACATAGCATGTCATTAATATCAATATCTA  972

seq1  CATATACCTATACATTTATATAGACACACATATATGCATGTATATATATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACCTATACATTTATATAGACACACATATATGCATGTATATATATA  1022

seq1  TACACACACACATATGTACGTATAGCTCAATAATTAGAGACGCCCAGTGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACACATATGTACGTATAGCTCAATAATTAGAGACGCCCAGTGG  1072

seq1  AAAATCTGGGAAATCCAGTTGTTGTCCCATCCATGACCAGTACATATCAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGGGAAATCCAGTTGTTGTCCCATCCATGACCAGTACATATCAA  1122

seq1  CTTTTCTTCATTATTTATCAGAATTC  1174
      ||||||||||||||||||||||||||
seq2  CTTTTCTTCATTATTTATCAGAATTC  1148


seq1: chr15_21583653_21584825
seq2: B6Ng01-274K20.g_67_1230

seq1  GAATTCTTGACTGTATTTATCTTCAGGGGCTTTTCCAAAGATGGACATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACTGTATTTATCTTCAGGGGCTTTTCCAAAGATGGACATCT  50

seq1  TTAGATATGTCTGTAATGGCTTCTACAGGGAGAATTCAGTGGTGAAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATGTCTGTAATGGCTTCTACAGGGAGAATTCAGTGGTGAAGGAA  100

seq1  GGATAGCCCTGATTCTGGGCAGCACTGTGGCACAAGCAAAGCTCCAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGCCCTGATTCTGGGCAGCACTGTGGCACAAGCAAAGCTCCAACAC  150

seq1  AAAAGATAAAAGGAAAAACTCCAAAAACTGCTAACCCCTTTCTTTCCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATAAAAGGAAAAACTCCAAAAACTGCTAACCCCTTTCTTTCCCTT  200

seq1  CCGATACACTTCATGCATAACAAGCTTTTTGATTCTGCCACAACTGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATACACTTCATGCATAACAAGCTTTTTGATTCTGCCACAACTGCTGA  250

seq1  GAGTCAAGCATACCATCAAACAATTGTAATCATGAGGATATAGCAAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAAGCATACCATCAAACAATTGTAATCATGAGGATATAGCAAAACT  300

seq1  TTGAGCCACAAGCAAAAGTTCTTCCTTTACATTGCTTAATGTCAAGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCACAAGCAAAAGTTCTTCCTTTACATTGCTTAATGTCAAGCATT  350

seq1  TGTCATGTCAACAAGAACAGCAATAGTGATGTAGATAAATGTGACAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGTCAACAAGAACAGCAATAGTGATGTAGATAAATGTGACAAACC  400

seq1  AGATGTGATCTGTTTAACTCAAAGACTAAGCTATTCATATATGCTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGATCTGTTTAACTCAAAGACTAAGCTATTCATATATGCTAAAAT  450

seq1  TATGCATCATATTTATACATAACAATTCTAAATTCTAATATGTAATACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATCATATTTATACATAACAATTCTAAATTCTAATATGTAATACAG  500

seq1  GATATCAAAATATACAGTTTATGATTTTTATTTAAATTTCAGACCGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCAAAATATACAGTTTATGATTTTTATTTAAATTTCAGACCGGCAG  550

seq1  ACTTTTTTCTAATGGTATATCTTATTTTAGAAAGTGCACACTTAATAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTCTAATGGTATATCTTATTTTAGAAAGTGCACACTTAATAAAT  600

seq1  GAAGAAAAAAACACACAATATGGGTATTTTGGAAATCGTAATTATCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAAAACACACAATATGGGTATTTTGGAAATCGTAATTATCATAT  650

seq1  TAAATTTTTCTCAGGATATTTGACATCAAAATCAACATTATCATAATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTCTCAGGATATTTGACATCAAAATCAACATTATCATAATTTA  700

seq1  TCTTAAGTAATCATCTTTAAAGAGAAAGAGTATGTTAGAAAATGGGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGTAATCATCTTTAAAGAGAAAGAGTATGTTAGAAAATGGGAAAG  750

seq1  ATTTTAGGTGTGCAGCCATTAATTATATTAATAATGGAGTGTCCAATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGGTGTGCAGCCATTAATTATATTAATAATGGAGTGTCCAATAAT  800

seq1  AAAATAGTGAGGTATTAACCATTTAAATTAAGGAAAATTATATGTGGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGTGAGGTATTAACCATTTAAATTAAGGAAAATTATATGTGGGGA  850

seq1  ATAGAGGTTATCTGAATGTAATATTAAAGGTGATGATATTTAACATTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGTTATCTGAATGTAATATTAAAGGTGATGATATTTAACATTTTC  900

seq1  AGATTATACTGCCAAATACCTAAACTTA-GCATGCATTAAATAACAAGAA  949
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGATTATACTGCCAAATACCTAAACTTAGGCATGCATTAAATAACAAGAA  950

seq1  TCTTTATCTCTTCCTTGTGTTTTCTTTCTTTCTCTATTCATCTTTTACAT  999
      |||||||||||||| |||| |||||||||||||||| ||||| |||||||
seq2  TCTTTATCTCTTCC-TGTG-TTTCTTTCTTTCTCTA-TCATC-TTTACAT  996

seq1  ACAGGCAGTGAAGCAAG-TCTTTTACAGAGGAGAATATTTAAAAGGTCTT  1048
      ||| ||||||||||||| ||||||||||| ||| ||||||||||||||||
seq2  ACA-GCAGTGAAGCAAGTTCTTTTACAGA-GAG-ATATTTAAAAGGTCTT  1043

seq1  TCAGAAGCCACATAGCTCAGTGTTTGACAGAGGCTCTAACTTGGGCATTT  1098
      ||||| ||||||||||||||||||||||||| ||||| |||||| || ||
seq2  TCAGAGGCCACATAGCTCAGTGTTTGACAGA-GCTCT-ACTTGGCCA-TT  1090

seq1  CATCTCTGGACATCATTAGAAATTCTTTTGTATGATTCTTGTGAATG-AC  1147
      ||||||| |||||||||  | | |||||   |||| ||||||||||| ||
seq2  CATCTCT-GACATCATT-TAGAGTCTTT--GATGA-TCTTGTGAATGAAC  1135

seq1  TGAGGACACAGAAAAATGA---CTCAAGT  1173
      ||||  | |||||||||||   |||||||
seq2  TGAGACCTCAGAAAAATGATCTCTCAAGT  1164


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