BAC Information

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BAC

Clone NameB6Ng01-276A01
Chromosome15 (Build37)
Map Location 72,246,706 - 72,247,854
singlet/doubletsinglet
Overlap genenone
Upstream gene1700010C24Rik, LOC100040847, Col22a1
Downstream geneKcnk9, 1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276A01.bB6Ng01-276A01.g
ACCGA076889GA076890
length4151,144
definitionB6Ng01-276A01.b B6Ng01-276A01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctgtttagctctgtaccacatttttaattgggttatttggtattttgaa
gtctaactttttgagttacttaaatattttgaacattagccctctattag
atgtagggttagtgaagatctcttctcaatctgtaggctgccattttgtc
ctattgacagtgtcctttgccttatagaagcttttcagtttcaagaggtc
ccatttatcagagtgaggcaacccaggcccaaaaaggatatgcattgttt
gtactcattgataacattagccaaaaatgacagaatacccatgatatacc
ccacataccataccataagaagttaaacaagaaggaaggcccaagtgagg
ataattcattcccacttagaattgggaacaaaataatatgggaggcagag
ggagggagggacctg
gaattcagtacaccccaggaagaagaagagtttctgtctctgttgacagt
tccaatgttgacatcaaagcagcatcccacctgggaatctgtcccttact
tgatacaggtgttgctgagtttagctcgtaaggatgattcctgttacccc
ctatagtaggcatgtgtaggcaatacaataactttgtgtagctcaatgtt
caaagtgacataaagagttttttaactaggaggattaaattacaaaagca
tgtgaagtatcttcatgtgtttgtaataaccattaaagcaatttctcttt
ggtacaatcagccagggggctaccttgaaagggtgtgtcaatgttgctct
tttgggtgacagcatactgtcgttaccccttcctgagaataaactgggtc
agagacacttgtcagcctgtgcaattccttctcagctcccactcctctcc
ctgagtccctgctccctgtgcaaggtgtcactgtctctgccttgctatca
ttgagtttgtcttggagtgagacctttatccctctcaccccccttttgaa
aactgagatcagattgtagattctagcttcccctgaagttaagagggcag
ggagtggcatttgattaggtataaatgcttgtgtttatcagaatggactg
taaaggaacagggtgctctgctggactctatacattcatccaaacatggt
gaatacactcaatttttatttgtcagttacacatcaacaaagctggagta
aaggaggaggaagaggaggaagaaaaagaggaagaggaataataggagta
aaacaggctctgagtccttgttatgacagcaatcttgcaatagggttttt
ggagacgccttcatgtttctgcttgctttctgggtagcctggcattgatt
aaacaaccaaaccaaaccaaaacaaaccaaaacaaaacaaaccaaacaaa
cctacaaatgttacaacataaacattctgaacgattgctgagtaatccaa
atggcttcagtgatttgaaaatacttttacaaattcccaattattatttt
tttttcgttccctgtaactgtgacttgggtttacctcattggactctaaa
gagttaatgaaactggttgttatgcctcctgtcacaagggtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72246706_72247854
seq2: B6Ng01-276A01.g_65_1208 (reverse)

seq1  ACCACCCTGTGT-ACAGAGAGCATAAACAACCAATTTCATAAAACCTCTT  49
      |||||||| ||| ||||   |||| |||||||| |||||| ||  |||||
seq2  ACCACCCT-TGTGACAGGAGGCAT-AACAACCAGTTTCATTAA--CTCTT  46

seq1  T--AGTCCAAATGA-GTAAACCCAAGTCAACCAAGTACAGGGACGAAAAA  96
      |  ||||| ||||| ||||||||||||||  ||  ||||||||   ||||
seq2  TAGAGTCC-AATGAGGTAAACCCAAGTCA--CAGTTACAGGGAACGAAAA  93

seq1  AAAAATAATAATTGGG-ATTTGTAAAGTTATTTCAAAATCACTGAAGGCC  145
      |||||||||||||||| |||||||||  |||||  ||||||||||| |||
seq2  AAAAATAATAATTGGGAATTTGTAAAAGTATTTTCAAATCACTGAA-GCC  142

seq1  ATTTGGATTACTCAGCAATCGTTCAGAATGTTTATGTTGTTAACATTTGT  195
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTTGGATTACTCAGCAATCGTTCAGAATGTTTATGTTG-TAACATTTGT  191

seq1  AGGTTTTGTTTTGGTTTGTTTTGTTTTGGTTTGTTTTGGTTTGGTTTGGT  245
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTT--GTTTGGTTTGTTTTGTTTTGGTTTGTTTTGGTTTGGTTTGGT  239

seq1  TGTTTAATCAATGCCAGGCTACCCAG-AAGCAAGCAGAAACATGAAGGCG  294
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGTTTAATCAATGCCAGGCTACCCAGAAAGCAAGCAGAAACATGAAGGCG  289

seq1  TCTCCAAAAACCCTATTGCAAGATTGCTGTCATAACAAGGACTCAGAGCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAAAACCCTATTGCAAGATTGCTGTCATAACAAGGACTCAGAGCC  339

seq1  TGTTTTACTCCTATTATTCCTCTTCCTCTTTTTCTTCCTCCTCTTCCTCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACTCCTATTATTCCTCTTCCTCTTTTTCTTCCTCCTCTTCCTCC  389

seq1  TCCTTTACTCCAGCTTTGTTGATGTGTAACTGACAAATAAAAATTGAGTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTACTCCAGCTTTGTTGATGTGTAACTGACAAATAAAAATTGAGTG  439

seq1  TATTCACCATGTTTGGATGAATGTATAGAGTCCAGCAGAGCACCCTGTTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACCATGTTTGGATGAATGTATAGAGTCCAGCAGAGCACCCTGTTC  489

seq1  CTTTACAGTCCATTCTGATAAACACAAGCATTTATACCTAATCAAATGCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAGTCCATTCTGATAAACACAAGCATTTATACCTAATCAAATGCC  539

seq1  ACTCCCTGCCCTCTTAACTTCAGGGGAAGCTAGAATCTACAATCTGATCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTGCCCTCTTAACTTCAGGGGAAGCTAGAATCTACAATCTGATCT  589

seq1  CAGTTTTCAAAAGGGGGGTGAGAGGGATAAAGGTCTCACTCCAAGACAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCAAAAGGGGGGTGAGAGGGATAAAGGTCTCACTCCAAGACAAA  639

seq1  CTCAATGATAGCAAGGCAGAGACAGTGACACCTTGCACAGGGAGCAGGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGATAGCAAGGCAGAGACAGTGACACCTTGCACAGGGAGCAGGGA  689

seq1  CTCAGGGAGAGGAGTGGGAGCTGAGAAGGAATTGCACAGGCTGACAAGTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGAGAGGAGTGGGAGCTGAGAAGGAATTGCACAGGCTGACAAGTG  739

seq1  TCTCTGACCCAGTTTATTCTCAGGAAGGGGTAACGACAGTATGCTGTCAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACCCAGTTTATTCTCAGGAAGGGGTAACGACAGTATGCTGTCAC  789

seq1  CCAAAAGAGCAACATTGACACACCCTTTCAAGGTAGCCCCCTGGCTGATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGAGCAACATTGACACACCCTTTCAAGGTAGCCCCCTGGCTGATT  839

seq1  GTACCAAAGAGAAATTGCTTTAATGGTTATTACAAACACATGAAGATACT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAAAGAGAAATTGCTTTAATGGTTATTACAAACACATGAAGATACT  889

seq1  TCACATGCTTTTGTAATTTAATCCTCCTAGTTAAAAAACTCTTTATGTCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGCTTTTGTAATTTAATCCTCCTAGTTAAAAAACTCTTTATGTCA  939

seq1  CTTTGAACATTGAGCTACACAAAGTTATTGTATTGCCTACACATGCCTAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACATTGAGCTACACAAAGTTATTGTATTGCCTACACATGCCTAC  989

seq1  TATAGGGGGTAACAGGAATCATCCTTACGAGCTAAACTCAGCAACACCTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGGGTAACAGGAATCATCCTTACGAGCTAAACTCAGCAACACCTG  1039

seq1  TATCAAGTAAGGGACAGATTCCCAGGTGGGATGCTGCTTTGATGTCAACA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGTAAGGGACAGATTCCCAGGTGGGATGCTGCTTTGATGTCAACA  1089

seq1  TTGGAACTGTCAACAGAGACAGAAACTCTTCTTCTTCCTGGGGTGTACTG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTGTCAACAGAGACAGAAACTCTTCTTCTTCCTGGGGTGTACTG  1139

seq1  AATTC  1149
      |||||
seq2  AATTC  1144