BAC Information

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BAC

Clone NameB6Ng01-278O22
Chromosome15 (Build37)
Map Location 41,144,212 - 41,145,304
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670013, LOC664872, Zfpm2, Ppia-ps25
Downstream geneOxr1, Abra, EG432946, LOC432947, LOC100039268
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278O22.bB6Ng01-278O22.g
ACCGA079045GA079046
length1,1771,092
definitionB6Ng01-278O22.b B6Ng01-278O22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctatagcaaacca
gtagccaacatcaaagtaaatggcgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacattg
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgactctaaaaattccaccagagaactcctaaaca
tgataaacagctttggtgaagtagctggatataaaattagctgaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaacagtcacaaataatataaaataccttggtg
ttactctaactaaggaggtaaaagatctgtatgataagaacttcaagact
gtgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggtaggatcaacattgtaaaaacggctatgttgccaaaag
caatctacagattcaatgcaatcttcatcaaaatcccaactcaattcttc
aacgaactagaaagggcaatctgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactctgctcaaggataaaagaacctctggtggaacca
ccatgcctgacctaaagctgtactacagagcaactgtgattaaaaactgc
atggtactggtatagctacagacaagtagaccaatggaatagaattgaag
acccataaatgaacccatatacctatggtcacttgatctttgacagggag
caaaaccatccagtggtaaaaagacagcatttttgacaaattctgctggc
acaactgggagttatcatgtagaagaatgcaatgatcatcctatcccctt
gtactaaggtcaaatctaagtgattacgaactcacataaaaccagagaca
ctaacttatagagagaaggtcgggtaagcctcgaagattggtacagggta
aatctgaatagacagcaatgcttgcgtgagaccggaatcgacatggaacc
tctaaattggccaagccttttctgtcc
gaattctaaggtatgctttacaatggtaaagtatctcccctttgatattt
ttaaaacactcaaatatacaaggtagcatgatataactgatagtctttga
attcttaaacgtacaggattctacggtatgtgagaaagtcaaagagaccc
acgtagagcttggcaaagaagctaaaacattcaattaaaatgatatattt
atagatatttttactttataaatttccctttacatcataatgtttcctta
gcaattgtaagagtttcgtaattggcaaagggcctagtttagtgaacttt
cccttcagctgtgttctctagttctctattgaggttctcgtaagtggata
cttttaaaaagcatatctttttctttctctcacacagggtcatgatgcta
atggccacaacagtgaattcatttattcacagcagatatttaatgctggc
tgttgttggatctcttagtgaatttttctaatagcttatagttatagagg
gtacaggctttctctcaaaacaaaccagtgcatgttccaagatggaggta
actaagcatgacctttccttcaaatgtataaggcaaacctaaataaaaca
acgaccagtttgtgtcaaagctaataagaaatgagaggcagttaactatt
tgtctcttttctagacttcatgagcctgctcattgatatctaatgaatat
tctgtttggagactttcagtggtgtgtggcacttggtcagtttgatgtga
ctccagtccctcattcaaaaaagaataatcaattacaatggggaaatgca
tgcaaatcttcacctttcactcctcttttccttcccttctctcttcctca
cctcaaagaaaaacggagaagttacctgcttgccactggataaattttaa
tatgtttgacttaaagttctaattattttgatgtagcatttctgtgtaag
tcagcttattaaacctcttaaagatgaaaattatttttataccagtcaaa
catttaaaaatatcatattgtagtattgaagttgcaagtgttatacccaa
tatttacatttatttctgttttatgtgatgttataaggcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_41144212_41145304
seq2: B6Ng01-278O22.g_68_1159 (reverse)

seq1  CATGCTTATTAACATCACATAAAACAG-AATAAATGTAAATA-TGGGTAT  48
      ||||| |  |||||||||||||||||| |||||||||||||| |||||| 
seq2  CATGCCTTATAACATCACATAAAACAGAAATAAATGTAAATATTGGGTA-  49

seq1  TAACACCTTTGCAACTTC-ATACTAC-ATATGATTATTTTTAAATGTTTG  96
      ||||||  |||||||||| ||||||| |||||| ||||||||||||||||
seq2  TAACAC--TTGCAACTTCAATACTACAATATGA-TATTTTTAAATGTTTG  96

seq1  ACTGGTAT-AAAATAATTTTCATTCTTTAAGAGGTTTAATAAGCTGACTT  145
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  ACTGGTATAAAAATAATTTTCA-TCTTTAAGAGGTTTAATAAGCTGACTT  145

seq1  ACCACAGAAATGCTACATCAAAATAATTAGAACTTTAAGTCAAACATATT  195
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CACAGAAATGCTACATCAAAATAATTAGAACTTTAAGTCAAACATATT  194

seq1  AAAATTTATCCAGTGGCAAGCAGGTAACTTCTCCGTTTTTCTTTGAGGTG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATCCAGTGGCAAGCAGGTAACTTCTCCGTTTTTCTTTGAGGTG  244

seq1  AGGAAGAGAGAAGGGAAGGAAAAGAGGAGTGAAAGGTGAAGATTTGCATG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGAGAAGGGAAGGAAAAGAGGAGTGAAAGGTGAAGATTTGCATG  294

seq1  CATTTCCCCATTGTAATTGATTATTCTTTTTTGAATGAGGGACTGGAGTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCCATTGTAATTGATTATTCTTTTTTGAATGAGGGACTGGAGTC  344

seq1  ACATCAAACTGACCAAGTGCCACACACCACTGAAAGTCTCCAAACAGAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAACTGACCAAGTGCCACACACCACTGAAAGTCTCCAAACAGAAT  394

seq1  ATTCATTAGATATCAATGAGCAGGCTCATGAAGTCTAGAAAAGAGACAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAGATATCAATGAGCAGGCTCATGAAGTCTAGAAAAGAGACAAA  444

seq1  TAGTTAACTGCCTCTCATTTCTTATTAGCTTTGACACAAACTGGTCGTTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAACTGCCTCTCATTTCTTATTAGCTTTGACACAAACTGGTCGTTG  494

seq1  TTTTATTTAGGTTTGCCTTATACATTTGAAGGAAAGGTCATGCTTAGTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTAGGTTTGCCTTATACATTTGAAGGAAAGGTCATGCTTAGTTA  544

seq1  CCTCCATCTTGGAACATGCACTGGTTTGTTTTGAGAGAAAGCCTGTACCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATCTTGGAACATGCACTGGTTTGTTTTGAGAGAAAGCCTGTACCC  594

seq1  TCTATAACTATAAGCTATTAGAAAAATTCACTAAGAGATCCAACAACAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAACTATAAGCTATTAGAAAAATTCACTAAGAGATCCAACAACAGC  644

seq1  CAGCATTAAATATCTGCTGTGAATAAATGAATTCACTGTTGTGGCCATTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTAAATATCTGCTGTGAATAAATGAATTCACTGTTGTGGCCATTA  694

seq1  GCATCATGACCCTGTGTGAGAGAAAGAAAAAGATATGCTTTTTAAAAGTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATGACCCTGTGTGAGAGAAAGAAAAAGATATGCTTTTTAAAAGTA  744

seq1  TCCACTTACGAGAACCTCAATAGAGAACTAGAGAACACAGCTGAAGGGAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTACGAGAACCTCAATAGAGAACTAGAGAACACAGCTGAAGGGAA  794

seq1  AGTTCACTAAACTAGGCCCTTTGCCAATTACGAAACTCTTACAATTGCTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACTAAACTAGGCCCTTTGCCAATTACGAAACTCTTACAATTGCTA  844

seq1  AGGAAACATTATGATGTAAAGGGAAATTTATAAAGTAAAAATATCTATAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACATTATGATGTAAAGGGAAATTTATAAAGTAAAAATATCTATAA  894

seq1  ATATATCATTTTAATTGAATGTTTTAGCTTCTTTGCCAAGCTCTACGTGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCATTTTAATTGAATGTTTTAGCTTCTTTGCCAAGCTCTACGTGG  944

seq1  GTCTCTTTGACTTTCTCACATACCGTAGAATCCTGTACGTTTAAGAATTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTTGACTTTCTCACATACCGTAGAATCCTGTACGTTTAAGAATTC  994

seq1  AAAGACTATCAGTTATATCATGCTACCTTGTATATTTGAGTGTTTTAAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTATCAGTTATATCATGCTACCTTGTATATTTGAGTGTTTTAAAA  1044

seq1  ATATCAAAGGGGAGATACTTTACCATTGTAAAGCATACCTTAGAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAAGGGGAGATACTTTACCATTGTAAAGCATACCTTAGAATTC  1092