BAC Information

Click to search

BAC

Clone NameB6Ng01-282O06
Chromosome15 (Build37)
Map Location 95,071,650 - 95,072,603
singlet/doubletsinglet
Overlap geneNell2
Upstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117, LOC100043315
Downstream geneDbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik, LOC100043335, EG667869, LOC667874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282O06.bB6Ng01-282O06.g
ACCGA081986GA081987
length1,106954
definitionB6Ng01-282O06.b B6Ng01-282O06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagtttagtgcgataccctattttttcatattttttattggat
attttctttatttacatttcaaatgttttccctcttccaggtctcccctt
tggaaacccctatgcaccccttgcttctgtgagggtgctctcccacccac
ccattcctgcttccacacccttgcattccccaaccatggggcttctaacc
ttcacaggatcaaggacctcttctcccactgatgccaatgttgatcattt
gtataaaggaaggctactgttttatttgagttaattttatgtcggtcaac
ttctctgaagtaaattagcatctgaataatttctctggtagaatgtttgg
ttgcttatgtatactatcatattatctgcaaataaaggtacctttatttt
tttctttgacagattgtatcacctggatttcttttctttctttgcttttt
gtctgattgttctagctaacacttcgagtactatattaaatacatatgga
agagtgggcatacttatcttgttcctgattttagtgagattgtttcaagt
atctctccacttaatttgatattgatggttggtttgcagtaaatttcttt
tattatgtttaggtttgggccttgaattcctgatctctccaatactttta
acatgaaggggtgttgtattttgtcaaatgctttttctgcatctaaggag
atgatcatgtgattttttttctttgagtttgtttatatagtggattacgt
taatgaattttcatatattgaaccaacctttcatccctgatatgaagcct
acttgatcatggtgaatgatggttttgatgtgtttcttggattcggcttg
caagaattttattgagtatttttttcattgatattcataaagtgagattt
ggtctcaagagattttttttgggttgggtcatttgtgttggttttcggta
tcaagagtatattggtgggctcataggatgaatttaaggtagtgttcctt
tctgttactattttattggaattagatttgagtaacattggaattctttt
cgaaatgatttggtagaaattctgcccctaaaaaccgtatcatgggtcct
atcgga
gaattctgatggccaactctgtcttttccctggcactctgttgctctggc
cacctctgggtaggggaactcaccagtgctgtttgtcactcccctgaaaa
taacccacaactaacacctaattgctgagtgtaattggattgaattttcc
tgtcctataagatcactcatttcttggaacagggcccacatctttggtct
ccaaccttcaacattcactcttactctgctacaggagcaccccccctagc
accccacacagggcacatcgcctctggctgcccattctcctggaccccta
caccttctttactgaccttcacaggattctccgcctggcgcaaacatccc
attggcatggtagccgtctctgcactcacagtgataccacccacgcaggt
tgatgcttttggcacggctgtcacactgaacaaacccctcgcagcactct
tcaatgtctgttgggcacaggaaacaaaatgaggatttttatacagttgc
tttattcttctaaagaatgttctattcaataacattctgctgtaaagcta
ctataattctgaatgccagcaaaccttgaaaccgaggaagtataaaaact
acatagtctacttagcagtcaaatgctatgcataaagaatgtagtgttat
ttgatatcaaccagagaaacatctagatggcttcttctctattacaattg
attcaatggtgaggtagaaaccatctgtggtgacctgtgagtttcaacaa
atgtccgcagccaaacctgacacatcctaggatggtggggtctcagtcct
tttccattaagagtgtgcatacacctttgttcaatcacattggggtgaca
agaggcacttccgggtagagcttactatggacctgtgcgtgaccccctgc
tcccttctacatccacatcacaagaactagcaatttccagaagctctagc
agac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_95071650_95072603
seq2: B6Ng01-282O06.g_68_1021

seq1  GAATTCTGATGGCACAGCTCTGTCATTTCCCTGGCACTCAGCTTGCTCTG  50
      ||||||||||||| || ||||||| |||||||||||||| | ||||||||
seq2  GAATTCTGATGGC-CAACTCTGTCTTTTCCCTGGCACTCTG-TTGCTCTG  48

seq1  GCCACCTCTGGGTAGGGGAACTCAGCAGTGCTGTTTGTCAGTCCACTGAA  100
      |||||||||||||||||||||||| ||||||||||||||| ||| |||||
seq2  GCCACCTCTGGGTAGGGGAACTCACCAGTGCTGTTTGTCACTCCCCTGAA  98

seq1  AATAACCCAAAACTAACAGCTAATTGCTGAGTGTAATTGGATTGAATTTT  150
      ||||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  AATAACCCACAACTAACACCTAATTGCTGAGTGTAATTGGATTGAATTTT  148

seq1  CCGGTCCTATAAGATCACAGAGTTCTTGGAACAGGGCCCACATCTTTGGT  200
      || |||||||||||||||  | ||||||||||||||||||||||||||||
seq2  CCTGTCCTATAAGATCACTCATTTCTTGGAACAGGGCCCACATCTTTGGT  198

seq1  CTCCAACATTCAACATTCACTCTTACTCTGCTACAGGAGCAGCCAGCCTA  250
      ||||||| ||||||||||||||||||||||||||||||||| ||  ||||
seq2  CTCCAACCTTCAACATTCACTCTTACTCTGCTACAGGAGCACCCCCCCTA  248

seq1  GCACCAGACACAGGGCACATCACCTCTGGCTGCCCATTCTCCTGGACCCC  300
      |||||  |||||||||||||| ||||||||||||||||||||||||||||
seq2  GCACCCCACACAGGGCACATCGCCTCTGGCTGCCCATTCTCCTGGACCCC  298

seq1  TACACCTTCTTTACTGACCTTCACAGGATTCTCCGCCTGGCGCAAACATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTTCTTTACTGACCTTCACAGGATTCTCCGCCTGGCGCAAACATC  348

seq1  CCATTGTCATGGTAGCCGTCTCTGCACTCACAGTGATACCACCCAGGCAG  400
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  CCATTGGCATGGTAGCCGTCTCTGCACTCACAGTGATACCACCCACGCAG  398

seq1  GTTGATGCAGTTGGCACGGCTGTCACACTGAACAAAGCCCTCAGAGCACT  450
      ||||||||  |||||||||||||||||||||||||| |||||  ||||||
seq2  GTTGATGCTTTTGGCACGGCTGTCACACTGAACAAACCCCTCGCAGCACT  448

seq1  CGTCAATGTCTGTTGGGCAGAGGAAACAAAAGGAGGATTTTTATACAGTT  500
      | ||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  CTTCAATGTCTGTTGGGCACAGGAAACAAAATGAGGATTTTTATACAGTT  498

seq1  GCTTTATTCTTCTAAAGAATGTTCTATTCAAGAACATTCTGCTGTAAAGC  550
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCTTTATTCTTCTAAAGAATGTTCTATTCAATAACATTCTGCTGTAAAGC  548

seq1  TACTATAATTCTGAATGCCAGCAAACCTTGAAACCGAGGAAGTATAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACTATAATTCTGAATGCCAGCAAACCTTGAAACCGAGGAAGTATAAAAA  598

seq1  CAACATAGT-TACTTAGCAGTCAAATGCTATGCATAAAGAATGTAGTGGT  649
      | ||||||| |||||||||||||||||||||||||||||||||||||| |
seq2  CTACATAGTCTACTTAGCAGTCAAATGCTATGCATAAAGAATGTAGTGTT  648

seq1  ATTTGATATTAACCAGAGAAACATCTAGATGGCTTCTTCTCTATTACAAT  699
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATATCAACCAGAGAAACATCTAGATGGCTTCTTCTCTATTACAAT  698

seq1  TGATTCAATGGTGAGGTAGAAACCATCTGTGGTGACCTGTGAGTTTCAGC  749
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGATTCAATGGTGAGGTAGAAACCATCTGTGGTGACCTGTGAGTTTCAAC  748

seq1  AAATGTCCCCAGCCAAGCCTGACACATCCTAGGATGGTGGGGTCTCAGTC  799
      |||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  AAATGTCCGCAGCCAAACCTGACACATCCTAGGATGGTGGGGTCTCAGTC  798

seq1  CTTTCCAATTAAGAGTGTGCATACACCTTTGTTCAGTCACATTGGGGTGA  849
      |||| | |||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTTTCCATTAAGAGTGTGCATACACCTTTGTTCAATCACATTGGGGTGA  848

seq1  CAAGAGGCACTTCCGGGTAGAGCTT-TTATGGACCTGTGCGTGACCCACC  898
      |||||||||||||||||||||||||  |||||||||||||||||||| ||
seq2  CAAGAGGCACTTCCGGGTAGAGCTTACTATGGACCTGTGCGTGACCC-CC  897

seq1  TGCTCCCTTCTACATCCACATCACAAGAACTAGCAATTTCCAGAGGCTCT  948
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGCTCCCTTCTACATCCACATCACAAGAACTAGCAATTTCCAGAAGCTCT  947

seq1  AG-AGAC  954
      || ||||
seq2  AGCAGAC  954