BAC Information

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BAC

Clone NameB6Ng01-296G06
Chromosome15 (Build37)
Map Location 29,120,005 - 29,121,148
singlet/doubletsinglet
Overlap genenone
Upstream geneDnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream geneLOC382975, Ctnnd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296G06.bB6Ng01-296G06.g
ACCGA092014GA092015
length1,1521,179
definitionB6Ng01-296G06.b B6Ng01-296G06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattagatgatttgatttggttcattgaccaggctataatacgta
tgtaaaaactgtattttaactctgcaaattagctcctctttttggaacat
tagtattgctgatggcttaatatataacctgtgtaactattttatatgtt
ttcctttgaactttaattaacctccataacttttggtcataaaaaaaaat
cagcattaccctaataacctctgtatgtacaatgcagaatattcctttca
gtccagattgtcaaaggggatggttggatcaaattcttacagattttatt
tccttattattattcagaaaagctgcattttgcagcttacatgaaaggct
gcagttgagagaagtatatttggcttgtcacctctgagatattaggctgt
cattcaactatcagttcaatattgaaattcagaaaccggcagtatgattt
aaggtaagaactattttgaaactgtaaacttcacggcataatttttgaca
gaacttttaatttacaaatttctctgctatttaagtgccctttttgcata
agtaacagatgtgttggtcatactgtgcctctcccttgagttcgtaaatg
catctttatactgccacaacaattttaggcactattttcttagaacagtg
attttaaagtggcagttactcgaatacatttatataaaattgaatcaaga
aaaaaaaatacctcagaatgtgagaagagagttttttaaaaattgctact
tgaattgaagggggagaaaaaggagaaggcagatatgttttttgaatctc
tgtaaagaaaatatttgatgatagcatataaaacttactatttaaagagg
ttccatcattctctcacgtgttgctgttagaggtgtgtgccaccttgttc
attcagcttttatgtggtgctgggaaattgaactcatgaagagcaatcac
agagagcagagagcaccttcacccactgaaggcatctttttctgaccctg
tgaagctgacatttgttatctgttaaatgccatggcatgcagtcaagtat
tagcagaaaaaaatgtatttgtcatgagggaaggtaacaactcttcgact
tacattagcctttctttttattcagagagagagagaggggagaaaagaca
ca
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaattaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggagtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaatttggacatagtactaccggaggatccagcgatacctctcctgggc
ctatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggattatagccccaaacc
taggataccgaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcatagtcagctaatgggatgggatcatagggctc
ccaatggaggagctagagaaagtagccaaggagctaaagggatctgcaac
cctatagtggaacacattatgaactaacccagtaccccgagctcttgact
ctagctgcaatattataatcaaagatgactagtcgtcaatcactgaagtt
agctaattgacttgcaaacttaatgccagttcaggacatcaagctaaagg
gatggctgggcacaaggggaagttggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_29120005_29121148
seq2: B6Ng01-296G06.b_46_1197

seq1  GAATTCATTAGATGATTTGATTTGGTTCATTGACCAGGCTATAATACGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGATGATTTGATTTGGTTCATTGACCAGGCTATAATACGTA  50

seq1  TGTAAAAACTGTATTTTAACTCTGCAAATTAGCTCCTCTTTTTGGAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAACTGTATTTTAACTCTGCAAATTAGCTCCTCTTTTTGGAACAT  100

seq1  TAGTATTGCTGATGGCTTAATATATAACCTGTGTAACTATTTTATATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTGCTGATGGCTTAATATATAACCTGTGTAACTATTTTATATGTT  150

seq1  TTCCTTTGAACTTTAATTAACCTCCATAACTTTTGGTCATAAAAAAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGAACTTTAATTAACCTCCATAACTTTTGGTCATAAAAAAAAAT  200

seq1  CAGCATTACCCTAATAACCTCTGTATGTACAATGCAGAATATTCCTTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTACCCTAATAACCTCTGTATGTACAATGCAGAATATTCCTTTCA  250

seq1  GTCCAGATTGTCAAAGGGGATGGTTGGATCAAATTCTTACAGATTTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGATTGTCAAAGGGGATGGTTGGATCAAATTCTTACAGATTTTATT  300

seq1  TCCTTATTATTATTCAGAAAAGCTGCATTTTGCAGCTTACATGAAAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATTATTATTCAGAAAAGCTGCATTTTGCAGCTTACATGAAAGGCT  350

seq1  GCAGTTGAGAGAAGTATATTTGGCTTGTCACCTCTGAGATATTAGGCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGAGAGAAGTATATTTGGCTTGTCACCTCTGAGATATTAGGCTGT  400

seq1  CATTCAACTATCAGTTCAATATTGAAATTCAGAAACCGGCAGTATGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACTATCAGTTCAATATTGAAATTCAGAAACCGGCAGTATGATTT  450

seq1  AAGGTAAGAACTATTTTGAAACTGTAAACTTCACGGCATAATTTTTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAGAACTATTTTGAAACTGTAAACTTCACGGCATAATTTTTGACA  500

seq1  GAACTTTTAATTTACAAATTTCTCTGCTATTTAAGTGCCCTTTTTGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTAATTTACAAATTTCTCTGCTATTTAAGTGCCCTTTTTGCATA  550

seq1  AGTAACAGATGTGTTGGTCATACTGTGCCTCTCCCTTGAGTTCGTAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAGATGTGTTGGTCATACTGTGCCTCTCCCTTGAGTTCGTAAATG  600

seq1  CATCTTTATACTGCCACAACAATTTTAGGCACTATTTTCTTAGAACAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTATACTGCCACAACAATTTTAGGCACTATTTTCTTAGAACAGTG  650

seq1  ATTTTAAAGTGGCAGTTACTCGAATACATTTATATAAAATTGAATCAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGTGGCAGTTACTCGAATACATTTATATAAAATTGAATCAAGA  700

seq1  AAAAAAAATACCTCAGAATGTGAGAAGAGAGTTTTTTAAAAATTGCTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATACCTCAGAATGTGAGAAGAGAGTTTTTTAAAAATTGCTACT  750

seq1  TGAATTGAAGGGGGAGAAAAAGGAGAAGGCAGATATGTTTTTTGAATCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGAAGGGGGAGAAAAAGGAGAAGGCAGATATGTTTTTTGAATCTC  800

seq1  TGTAAAGAAAATATTTGATGATAGCATATAAAACTTACTATTTAAAGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGAAAATATTTGATGATAGCATATAAAACTTACTATTTAAAGAGG  850

seq1  TTCCATCATTCTCTCACGTGTTGCTGTTAGAGGTGTGTGCCACCTTGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCATTCTCTCACGTGTTGCTGTTAGAGGTGTGTGCCACCTTGTTC  900

seq1  ATTCAGCTTTTATGTGGTGCTGGG-AATTGAACTCATGAAGAGCAATCAC  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATTCAGCTTTTATGTGGTGCTGGGAAATTGAACTCATGAAGAGCAATCAC  950

seq1  AGAGAGCAGAGAGCACCTTCACCCACTG-AGGCATC-TTTTCTGACCCTG  997
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  AGAGAGCAGAGAGCACCTTCACCCACTGAAGGCATCTTTTTCTGACCCTG  1000

seq1  TGAAGCTGACATTTGTTATCTGTTAAAATGCCATGGCATGCAGTCAAGTA  1047
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  TGAAGCTGACATTTGTTATCTGTT-AAATGCCATGGCATGCAGTCAAGT-  1048

seq1  ATTAGCAGAAAAAAATGTATTTGTCATGAGGGAAGGTTACAACTCTTCGA  1097
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTAGCAGAAAAAAATGTATTTGTCATGAGGGAAGGTAACAACTCTTCGA  1098

seq1  CTTACATTTAGCTTTC-TGTTAT-----CAGAGAGAGAGGGGAG-AAAGA  1140
      ||||||||   ||||| | ||||      ||||||||||||||| |||||
seq2  CTTACATTAGCCTTTCTTTTTATTCAGAGAGAGAGAGAGGGGAGAAAAGA  1148

seq1  CACA  1144
      ||||
seq2  CACA  1152