BAC Information

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BAC

Clone NameB6Ng01-297L19
Chromosome8 (Build37)15 (Build37)
Map Location 98,802,203 - 98,802,27899,097,637 - 99,098,681
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneBC016201, Map1lc3-ps6, 1700055M20Rik, Zfp319, AA960436, Mmp15, Gtl3, Csnk2a2, 4933406B17Rik, Ccdc113, 4931432M23Rik, EG546088, LOC100041040, Gins3, LOC547022, Ndrg4, Setd6, Cnot1, LOC100041953, LOC100041088, BC031853, LOC100041972, Got2, LOC667445
Downstream geneLOC333331
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297L19.bB6Ng01-297L19.g
ACCGA093024GA093025
length1101,051
definitionB6Ng01-297L19.b B6Ng01-297L19.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(98,802,203 - 98,802,278)(99,097,637 - 99,098,681)
sequence
gaattccaggacagcctcggctatgtagcaaaaccctgtgtttaaaaata
gaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgt
gaattcctgataagtcatctcgaaaagagacgtgggcatggctgagatac
tatgcacgtcagccggggccggggagaagccggagctaaagcgctgaggg
tctggtctgtcgggaaggcggacattacacatgagtgaaaggggctctga
ataaagagcaggaagttctagaaaaggaaattaaagatggggatctggaa
attagaaagttagaggctggggggatgctcagtggtgaagagtaggcact
gctcttgcagagggcctggggaccttgtcaagaaggtcacaaacgcctgt
aactccagcttcaaaccttctcctgaattcctcggacagttcacataggc
tcgagcacacactctcgccccctccccatacacacacacacacacacaca
cacacacacacaaataacatggggttgagaatccagctcagtggtagatg
cttgcctgcacactgaaagtccctaattccaattcccagcacacagaaaa
agtaactataagaattccttcaacaaggttattggcaatctagacaaaaa
ccaaaggtggtgagaaatccatgaactcgaggctgggctgacagaaaaca
accaaatgtagcaccttctaacacccaagcccccaaactaagcaccggaa
ggcacgtggagtgatatcacatgactgtggagtcccagaaagagaagggg
aaatgtcctaagagataatgagaatttccaaataatagaagaatgaactt
caagtttcagagaacctaagcagataagtataaagaaagccatacctatt
atcacagtgaagcctgaagccaaagacaaaagagcaattttaaacaaaat
gtttattttaactttgggacatatgtgctttgcagcatccatgtctgtga
acgatgtgcatgcctggtgccgtttggcccaaagagggcatcagataccc
tggaactagagtggcagatagtgtgagctgccatgtgggtgttgggaatc
aaaccaggacctcttgcaagagcatccagtactctactgccaaggccatc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_98802203_98802278
seq2: B6Ng01-297L19.b_91_155 (reverse)

seq1  ACACACACCACACACACACACACACACACACACACACACACACACACACA  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACA-CACACACACACACACACACACACACACACACACACACACACA  49

seq1  CACACACCTCCACACACTGTCTATTT  76
      |||||||||          |||||||
seq2  CACACACCT----------TCTATTT  65

seq1: chr15_99097637_99098681
seq2: B6Ng01-297L19.g_73_1118 (reverse)

seq1  AGATGG-CTTGGCAGTTAAGAGTACTGGATGCTCTTGC-AGAGGTCCTGG  48
      |||||| |||||||||  |||||||||||||||||||| ||||||||| |
seq2  AGATGGCCTTGGCAGT--AGAGTACTGGATGCTCTTGCAAGAGGTCCT-G  47

seq1  GTTTGAATCCCAACACCCACATGGCAGCTCACAACTATCTGCCACTCTAG  98
      |||||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  GTTTGATTCCCAACACCCACATGGCAGCTCAC-ACTATCTGCCACTCTAG  96

seq1  TTCCAGGGTATCTGATGCCCTCTTTGGGCCAAACGGCACCAGGCATGCAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGGTATCTGATGCCCTCTTTGGGCCAAACGGCACCAGGCATGCAC  146

seq1  ATCGTTCACAGACATGGATGCTGCAAAGCACATATGT-CCAAAGTTAAAA  197
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATCGTTCACAGACATGGATGCTGCAAAGCACATATGTCCCAAAGTTAAAA  196

seq1  TAAACATTTTGTTTAAAATTGCTCTTTTGTCTTTGGCTTCAGGCTTCACT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTTTGTTTAAAATTGCTCTTTTGTCTTTGGCTTCAGGCTTCACT  246

seq1  GTGATAATAGGTATGGCTTTCTTTATACTTATCTGCTTAGGTTCTCTG-A  296
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTGATAATAGGTATGGCTTTCTTTATACTTATCTGCTTAGGTTCTCTGAA  296

seq1  ACTTGAAGTTCATTCTTCTATTATTTGGAAATTCTCATTATCTCTTAGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGTTCATTCTTCTATTATTTGGAAATTCTCATTATCTCTTAGGA  346

seq1  CATTTCCCCTTCTCTTTCTGGGACTCCACAGTCATGTGATATCACTCCAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCCTTCTCTTTCTGGGACTCCACAGTCATGTGATATCACTCCAC  396

seq1  GTGCCTT-CGGTGCTTAGTTTGGGGGCTTGGGTGTTAGAAGGTGCTACAT  445
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTCCGGTGCTTAGTTTGGGGGCTTGGGTGTTAGAAGGTGCTACAT  446

seq1  TTGGTTGTTTTCTGTCAGCCCAGCCTCGAGTTCATGGATTTCTCACCACC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGTTTTCTGTCAGCCCAGCCTCGAGTTCATGGATTTCTCACCACC  496

seq1  TTTGGTTTTTGTCTAGATTGCCAATAACCTTGTTGAAGGAATTCTTATAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTGTCTAGATTGCCAATAACCTTGTTGAAGGAATTCTTATAG  546

seq1  TTACTTTTTCTGTGTGCTGGGAATTGGAATTAGGGACTTTCAGTGTGCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTTCTGTGTGCTGGGAATTGGAATTAGGGACTTTCAGTGTGCAG  596

seq1  GCAAGCATCTACCACTGAGCTGGATTCTCAACCCCATGTTATTTGTGTGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATCTACCACTGAGCTGGATTCTCAACCCCATGTTATTTGTGTGT  646

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTATGGGGAGGGGGCGAGAGTGTGTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTATGGGGAGGGGGCGAGAGTGTGTG  696

seq1  CTCGAGCCTATGTGAACTGTCCGAGGAATTCAGGAGAAGGTTTGAAGCTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGCCTATGTGAACTGTCCGAGGAATTCAGGAGAAGGTTTGAAGCTG  746

seq1  GAGTTACAGGCGTTTGTGACCTTCTTGACAAGGTCCCCAGGCCCTCTGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACAGGCGTTTGTGACCTTCTTGACAAGGTCCCCAGGCCCTCTGCA  796

seq1  AGAGCAGTGCCTACTCTTCACCACTGAGCATCCCCCCAGCCTCTAACTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTGCCTACTCTTCACCACTGAGCATCCCCCCAGCCTCTAACTTT  846

seq1  CTAATTTCCAGATCCCCATCTTTAATTTCCTTTTCTAGAACTTCCTGCTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCCAGATCCCCATCTTTAATTTCCTTTTCTAGAACTTCCTGCTC  896

seq1  TTTATTCAGAGCCCCTTTCACTCATGTGTAATGTCCGCCTTCCCGACAGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGAGCCCCTTTCACTCATGTGTAATGTCCGCCTTCCCGACAGA  946

seq1  CCAGACCCTCAGCGCTTTAGCTCCGGCTTCTCCCCGGCCCCGGCTGACGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCCTCAGCGCTTTAGCTCCGGCTTCTCCCCGGCCCCGGCTGACGT  996

seq1  GCATAGTATCTCAGCCATGCCCACGTCTCTTTTCGAGATGACTTATCAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTATCTCAGCCATGCCCACGTCTCTTTTCGAGATGACTTATCAGG  1046