BAC Information

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BAC

Clone NameB6Ng01-299L15
Chromosome15 (Build37)
Map Location 69,617,434 - 69,735,356
singlet/doubletdoublet
Overlap genenone
Upstream geneEG633752, Khdrbs3
Downstream geneLOC383050
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299L15.bB6Ng01-299L15.g
ACCGA094486GA094487
length588266
definitionB6Ng01-299L15.b B6Ng01-299L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,734,763 - 69,735,356)(69,617,434 - 69,617,704)
sequence
ttagaataaatatacatatttattcagtgtccaagaaactgatggaaggt
ttgagtttaaatctgggcccacttggagttacactccaattgaggaatgt
tccaaggaatttaaagaaacttgacagagataccagcattcaaccagtgc
tgtaaggactatggctagagagtctcaagccaattttatgattttgagca
cttattgtgtctcactatgtgaagcaattcatgggtgccttactctgaaa
ctaggccaagagtcctttccagcattttagccatggtgttaacttctaag
caagatcaattgtcaatgattatgtagggtgagacacttgagagtgacac
tatctagacaaggatttccactcagaaggaaagccaaagcagtctgatac
tctcacccaacagtgacacttgcacaggcagatacagatggggaggaaag
agctgcctacaaacacattaacagtaactgggccatcactgcaaagacag
gcccattggacttgcaaactttatatgccccagtacaggggaacgccagg
gccaaaaagggggagcgggtaggtaggggagtgggggt

ctaccctgagttttcaggacttccagaatatcttagttaaaagctgtgtg
ttttttgtttgattattgtttggcttgtttgcttgatctccatctatcta
cacttttcaaactcctgttcttcttcctccctcttttcttttcttttctt
ttcttttcttttcttttcttttcttttcttttcttttcttttcttttctc
ttctcttctcttctcttctcttctcttctctcctctcctctcctctcccc
tcccctcccctcccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69734763_69735356
seq2: B6Ng01-299L15.b_45_638 (reverse)

seq1  ACCCCCACTCCCCTACCTACCCGCTCCCCCTTTTTGGCCCTGGCGTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACTCCCCTACCTACCCGCTCCCCCTTTTTGGCCCTGGCGTTCCC  50

seq1  CTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTGTCTTTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTGTCTTTGCAG  100

seq1  TGATGGCCCAGTTACTGTTAATGTGTTTGTAGGCAGCTCTTTCCTCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCCCAGTTACTGTTAATGTGTTTGTAGGCAGCTCTTTCCTCCCCA  150

seq1  TCTGTATCTGCCTGTGCAAGTGTCACTGTTGGGTGAGAGTATCAGACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCTGCCTGTGCAAGTGTCACTGTTGGGTGAGAGTATCAGACTGC  200

seq1  TTTGGCTTTCCTTCTGAGTGGAAATCCTTGTCTAGATAGTGTCACTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTCCTTCTGAGTGGAAATCCTTGTCTAGATAGTGTCACTCTCA  250

seq1  AGTGTCTCACCCTACATAATCATTGACAATTGATCTTGCTTAGAAGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCACCCTACATAATCATTGACAATTGATCTTGCTTAGAAGTTAA  300

seq1  CACCATGGCTAAAATGCTGGAAAGGACTCTTGGCCTAGTTTCAGAGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGGCTAAAATGCTGGAAAGGACTCTTGGCCTAGTTTCAGAGTAAG  350

seq1  GCACCCATGAATTGCTTCACATAGTGAGACACAATAAGTGCTCAAAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCATGAATTGCTTCACATAGTGAGACACAATAAGTGCTCAAAATCA  400

seq1  TAAAATTGGCTTGAGACTCTCTAGCCATAGTCCTTACAGCACTGGTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGGCTTGAGACTCTCTAGCCATAGTCCTTACAGCACTGGTTGAA  450

seq1  TGCTGGTATCTCTGTCAAGTTTCTTTAAATTCCTTGGAACATTCCTCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTATCTCTGTCAAGTTTCTTTAAATTCCTTGGAACATTCCTCAAT  500

seq1  TGGAGTGTAACTCCAAGTGGGCCCAGATTTAAACTCAAACCTTCCATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGTAACTCCAAGTGGGCCCAGATTTAAACTCAAACCTTCCATCAG  550

seq1  TTTCTTGGACACTGAATAAATATGTATATTTATTCTAAGAATTC  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGACACTGAATAAATATGTATATTTATTCTAAGAATTC  594


seq1: chr15_69617434_69617704
seq2: B6Ng01-299L15.g_76_341

seq1  CTACCCTGAGTTTTCAGGACTTCCAGAATATCTTAGTTAAAAGCTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTGAGTTTTCAGGACTTCCAGAATATCTTAGTTAAAAGCTGTGTG  50

seq1  TTTTTTGTTTGATTATTGTTTGGCTTGTTTGCTTGATCTCCATCTATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTGATTATTGTTTGGCTTGTTTGCTTGATCTCCATCTATCTA  100

seq1  CACTTTTCAAACTCCTGTTCTTCTTCCTCCCTCTTTTCTTTTCTTTTCTT  150
      |||||||||||||||||||||||||||||||     ||||||||||||||
seq2  CACTTTTCAAACTCCTGTTCTTCTTCCTCCC-----TCTTTTCTTTTCTT  145

seq1  TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT  195

seq1  TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTCCTCTCCTCTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTCCTCTCCTCTCCTC  245

seq1  TCCCCTCCCCTCCCCTCCCCT  271
      |||||||||||||||||||||
seq2  TCCCCTCCCCTCCCCTCCCCT  266


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