BAC Information

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BAC

Clone NameB6Ng01-300H03
Chromosome15 (Build37)
Map Location 25,193,150 - 25,340,877
singlet/doubletdoublet
Overlap gene4930445E18Rik, Basp1
Upstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik
Downstream geneEG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300H03.bB6Ng01-300H03.g
ACCGA095020GA095021
length1,145695
definitionB6Ng01-300H03.b B6Ng01-300H03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,339,725 - 25,340,877)(25,193,150 - 25,193,844)
sequence
gaattccatgtaatgagagtcatgtattatcctgtatgaattgtgcattg
agtagtataatttagagggttatctgtacgttaataaaatctttttttcc
cccctgggtagtgcttttggaggaaagtgctaggatatagtctaaaacca
atagctttcaattcagtgagctttaagtttttaaacaaaataatttgaaa
atcaattaaaaacatttttacttttttttctttagccagctttcttgcta
aacattagcagaaggtgaagggtgctctttaaaatcttgatatagtgagc
cagcagttgactctattgattatctggacatttgtgtcccttaactggtg
ttcacgctgtctgtggcttaggaaatggatctccctccattaccctaatt
taaatactcagtggcagggccttcagcattaggctccctgtgctttgagg
cctctttataatcctcctggattttccagaacaaatcacattatggtttt
aaatgtactaattatgtttttctttatttttatttccctttaacttcaaa
ccatttgcatttcatggtcaaaataaatggggcatgaaatcggagaagaa
cctaccttttgggaatattgttcattgtaaagtagatgtctgtgccactc
acggccatcgtgcaaaacattgcacattggaggcgttcttccaatagctc
aagtagcatgtaaatacacacatgcatatgtgcatcatagatacacacac
acatatatatatacatacatactataaaatcctattaatgacagtactaa
aggagttgttttggaatgttgtttgctcttttgaaagcagttcatttctg
tcctcataaatacatacttgaaaggagaagtcttcctaccaatacttcta
agatatagtgtttgcctcgagtttaggaaagatgttccttttcaggtccc
agactcccactagtcactattctactttacacgctggactaaatactacc
aaataaaggacttctacaggtattttttttgtgttgtgtttggtctgatt
ttgtgatctcttctaaattcattttaaaagctgtctaaaaaagtccgaga
ctacgtcaagcctggtatctggcttgtgggctttgcatagccttt

gaattcttgccttaagagtatgcaggagagagccaccatcatatagagaa
gcaaggagagtgccctgggctctgggccaagaaaatgtgacccagaagtc
taagatggaacataaaaatcagtaagtagtaacttggagttattggtggg
aggtagattctaacagcatggaggttaggcagctgcccagctattgtgct
gtttagagcacattaaaatataaaagctgcgtgtgtctttcattcaggaa
cataaaccataaaggcaggtagtaaccccacaccaagattaatgtaatac
tacgtaatactcattcataaatgtgggtccagatttaccatgttacctat
gaattctcttgggggtgtggccactggcaggcctagcatttggacccaca
cccgtgcacatgtggatatcactaattattctcaccagaatctgttaatt
accagtagttccttagtaattggtagggcctggtatgcccctacatcttt
cgtagctgactattgagctggcctgccttccgtcgtcctgtccaagtaag
cacagctactgtgagatcgggaccacactggctgagctgtgcttagaagg
tgccattttgtaagtcttttctctgtcatctgactcgtatgtattagagg
aagaagagaatagaaaaaggaagaaaagggagggagggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25339725_25340877
seq2: B6Ng01-300H03.b_43_1187 (reverse)

seq1  AAAGCCTATGCAAACCCCACAAGCCAGATACCAGCTTTGACGTAGTTCTC  50
      |||| ||||||||| |||||||||||||||||||  ||||||||| ||||
seq2  AAAGGCTATGCAAAGCCCACAAGCCAGATACCAGGCTTGACGTAG-TCTC  49

seq1  GGGACTTTTTTAGACAGCTTTTAAAAATGAAATTTTAGAAGAGATCACAA  100
       ||||||||||||||||||||| ||||||||  ||||||||||||||| |
seq2  -GGACTTTTTTAGACAGCTTTT-AAAATGAA--TTTAGAAGAGATCAC-A  94

seq1  AAATCAGACCAAAACAACAACAACAAAAAAATACCTGTAGAAGTCCTTTA  150
      |||||||||||||   ||||||  ||||||||||||||||||||||||||
seq2  AAATCAGACCAAA--CACAACACAAAAAAAATACCTGTAGAAGTCCTTTA  142

seq1  TTTGGTAGTATTTAGTCCAGCGTGTAAAGTAGAATAGTGACTAGTGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAGTATTTAGTCCAGCGTGTAAAGTAGAATAGTGACTAGTGGGAG  192

seq1  TCTGGGACCTGAAAAGGAACATCTTTCCTAAACTCGAGGCAAACACTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGACCTGAAAAGGAACATCTTTCCTAAACTCGAGGCAAACACTATA  242

seq1  TCTTAGAAGTATTGGTAGGAAGACTTCTCCTTTCAAGTATGTATTTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAGTATTGGTAGGAAGACTTCTCCTTTCAAGTATGTATTTATGA  292

seq1  GGACAGAAATGAACTGCTTTCAAAAGAGCAAACAACATTCCAAAACAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAAATGAACTGCTTTCAAAAGAGCAAACAACATTCCAAAACAACT  342

seq1  CCTTTAGTACTGTCATTAATAGGATTTTATAGTATGTATGTATATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGTACTGTCATTAATAGGATTTTATAGTATGTATGTATATATATA  392

seq1  TGTGTGTGTGTATCTATGATGCACATATGCATGTGTGTATTTACATGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTATCTATGATGCACATATGCATGTGTGTATTTACATGCTA  442

seq1  CTTGAGCTATTGGAAGAACGCCTCCAATGTGCAATGTTTTGCACGATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCTATTGGAAGAACGCCTCCAATGTGCAATGTTTTGCACGATGGC  492

seq1  CGTGAGTGGCACAGACATCTACTTTACAATGAACAATATTCCCAAAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAGTGGCACAGACATCTACTTTACAATGAACAATATTCCCAAAAGGT  542

seq1  AGGTTCTTCTCCGATTTCATGCCCCATTTATTTTGACCATGAAATGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTTCTCCGATTTCATGCCCCATTTATTTTGACCATGAAATGCAAA  592

seq1  TGGTTTGAAGTTAAAGGGAAATAAAAATAAAGAAAAACATAATTAGTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGAAGTTAAAGGGAAATAAAAATAAAGAAAAACATAATTAGTACA  642

seq1  TTTAAAACCATAATGTGATTTGTTCTGGAAAATCCAGGAGGATTATAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACCATAATGTGATTTGTTCTGGAAAATCCAGGAGGATTATAAAG  692

seq1  AGGCCTCAAAGCACAGGGAGCCTAATGCTGAAGGCCCTGCCACTGAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCAAAGCACAGGGAGCCTAATGCTGAAGGCCCTGCCACTGAGTAT  742

seq1  TTAAATTAGGGTAATGGAGGGAGATCCATTTCCTAAGCCACAGACAGCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAGGGTAATGGAGGGAGATCCATTTCCTAAGCCACAGACAGCGT  792

seq1  GAACACCAGTTAAGGGACACAAATGTCCAGATAATCAATAGAGTCAACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCAGTTAAGGGACACAAATGTCCAGATAATCAATAGAGTCAACTG  842

seq1  CTGGCTCACTATATCAAGATTTTAAAGAGCACCCTTCACCTTCTGCTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCACTATATCAAGATTTTAAAGAGCACCCTTCACCTTCTGCTAAT  892

seq1  GTTTAGCAAGAAAGCTGGCTAAAGAAAAAAAAGTAAAAATGTTTTTAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGCAAGAAAGCTGGCTAAAGAAAAAAAAGTAAAAATGTTTTTAATT  942

seq1  GATTTTCAAATTATTTTGTTTAAAAACTTAAAGCTCACTGAATTGAAAGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCAAATTATTTTGTTTAAAAACTTAAAGCTCACTGAATTGAAAGC  992

seq1  TATTGGTTTTAGACTATATCCTAGCACTTTCCTCCAAAAGCACTACCCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTTTTAGACTATATCCTAGCACTTTCCTCCAAAAGCACTACCCAG  1042

seq1  GGGGGAAAAAAAGATTTTATTAACGTACAGATAACCCTCTAAATTATACT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAAAAAAGATTTTATTAACGTACAGATAACCCTCTAAATTATACT  1092

seq1  ACTCAATGCACAATTCATACAGGATAATACATGACTCTCATTACATGGAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATGCACAATTCATACAGGATAATACATGACTCTCATTACATGGAA  1142

seq1  TTC  1153
      |||
seq2  TTC  1145


seq1: chr15_25193150_25193844
seq2: B6Ng01-300H03.g_66_760

seq1  GAATTCTTGCCTTAAGAGTATGCAGGAGAGAGCCACCATCATATAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCTTAAGAGTATGCAGGAGAGAGCCACCATCATATAGAGAA  50

seq1  GCAAGGAGAGTGCCCTGGGCTCTGGGCCAAGAAAATGTGACCCAGAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAGAGTGCCCTGGGCTCTGGGCCAAGAAAATGTGACCCAGAAGTC  100

seq1  TAAGATGGAACATAAAAATCAGTAAGTAGTAACTTGGAGTTATTGGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGGAACATAAAAATCAGTAAGTAGTAACTTGGAGTTATTGGTGGG  150

seq1  AGGTAGATTCTAACAGCATGGAGGTTAGGCAGCTGCCCAGCTATTGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGATTCTAACAGCATGGAGGTTAGGCAGCTGCCCAGCTATTGTGCT  200

seq1  GTTTAGAGCACATTAAAATATAAAAGCTGCGTGTGTCTTTCATTCAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAGCACATTAAAATATAAAAGCTGCGTGTGTCTTTCATTCAGGAA  250

seq1  CATAAACCATAAAGGCAGGTAGTAACCCCACACCAAGATTAATGTAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACCATAAAGGCAGGTAGTAACCCCACACCAAGATTAATGTAATAC  300

seq1  TACGTAATACTCATTCATAAATGTGGGTCCAGATTTACCATGTTACCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTAATACTCATTCATAAATGTGGGTCCAGATTTACCATGTTACCTAT  350

seq1  GAATTCTCTTGGGGGTGTGGCCACTGGCAGGCCTAGCATTTGGACCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGGGGGTGTGGCCACTGGCAGGCCTAGCATTTGGACCCACA  400

seq1  CCCGTGCACATGTGGATATCACTAATTATTCTCACCAGAATCTGTTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGCACATGTGGATATCACTAATTATTCTCACCAGAATCTGTTAATT  450

seq1  ACCAGTAGTTCCTTAGTAATTGGTAGGGCCTGGTATGCCCCTACATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTAGTTCCTTAGTAATTGGTAGGGCCTGGTATGCCCCTACATCTTT  500

seq1  CGTAGCTGACTATTGAGCTGGCCTGCCTTCCGTCGTCCTGTCCAAGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGCTGACTATTGAGCTGGCCTGCCTTCCGTCGTCCTGTCCAAGTAAG  550

seq1  CACAGCTACTGTGAGATCGGGACCACACTGGCTGAGCTGTGCTTAGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTACTGTGAGATCGGGACCACACTGGCTGAGCTGTGCTTAGAAGG  600

seq1  TGCCATTTTGTAAGTCTTTTCTCTGTCATCTGACTCGTATGTATTAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTTTGTAAGTCTTTTCTCTGTCATCTGACTCGTATGTATTAGAGG  650

seq1  AAGAAGAGAATAGAAAAAGGAAGAAAAGGGAGGGAGGGAGGGAGG  695
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGAATAGAAAAAGGAAGAAAAGGGAGGGAGGGAGGGAGG  695


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