BAC Information

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BAC

Clone NameB6Ng01-300I11
Chromosome6 (Build37)15 (Build37)
Map Location 119,346,577 - 119,347,75691,063,435 - 91,063,475
singlet/doubletsingletsinglet
Overlap geneAdipor2
Upstream geneBms1, Zfp248, Zfp9, Ankrd26, Cacna1c, Dcp1b, Cacna2d4, Lrtm2
Downstream geneWnt5b, Fbxl14, Erc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2, B4galnt3, Ccdc77, Jarid1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300I11.bB6Ng01-300I11.g
ACCGA095083GA095084
length1,164558
definitionB6Ng01-300I11.b B6Ng01-300I11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(119,346,577 - 119,347,756)(91,063,435 - 91,063,475)
sequence
gaattccaggcaagctagggctacactgagagagcctatctcaaaaataa
ctatctaattaataaacaatcccaataccccatctattttctttatttga
gtggggagaagaaagaagaaaccacatcccagggatggagagatggcgca
gtggttaagagcatgcactgttcttccagaggacctgagtccagttccca
gcacccacaggtcaggcagttcatactcatctgtaactccagctccagga
ggtctgatgcctctggcttccaagggcacccagtgctagagtatacatcg
tccctgaaaaagagcagctcttgaaaggtttttggtgtggccgccagtgg
caactgtgctacagaaccatcgcccactcttttcttctcttacattacta
ctggaccaatttgtttgtaaaaaggtaaaaattgccaggtgtggtggcgc
acgcctttcatcccagcactcgggaggcagaggcaggcggatttctgagt
gcaaggccagcctggtctacagagtgagatccgggacagccagggctaca
cagagaaaccctgtctcgaaaaacaaaaaccaaaaaccaaccaaccaaac
aaacaaaaaaaccccaaaaaggtaaaaatttcttgaacagacatattcca
agtactgagactgtaataatagaagaacatctttgtttttgagtctagtg
gcccttgccagacttccaggagagtccatggatttggttaagatcatagt
gtgtcaagtttgagctgagattataagccggtaccacatggatttggtta
agatcatagtgtgtcaagtttgagctgagattataagccggtaccacctt
tggctcttttgctagctatgtgattttggggaaatgacttgtttgtgctt
cagtttccttatttgtaaatggggatttaaaaaaaaaacataatttaaga
ggcattgtggcataaacctgtaatcttacacttgagaggcggagacagga
ggattactatgaatttgagctgagcctgggttcttatggtgagtgctgcc
cagtcagatacgggatggtattctaaacaacaacaacaaacaacttcagt
tatctgtcttggccaggtaaggtgggtatgttagtcctctactatggtgt
gtgcaaccctgcag
atagaacttttaaggaagctctcacacagatactccttaaactgttctac
aacattgaaatggaaggaacactactaaacacatcccatgaaatcagata
ccaaaaatgaaattaaaccacagagcaacacatatgcaaaaattctcaac
aaaatgccaacaaaccaaattcaggaacacattaaggtcacagactgcat
caaagttgctttcatcctaggaatgcaaagctggttcaacatacataaat
caataaatgtggtaatgatcagcaatatgtgccaacagcaccatacaaat
gagcttaaggatagaacttacataaccacctagatggatgcaggaatgca
gcttcataataaaggagcctgtgatggtttgaatgagcatggccccacgg
gttcttcttggtccccagttagtggaactgtttggaaaggaatgggagat
gtgtccttgttggagtacgtatgtctctcagagtgggctctgaggtttca
aacccccacaccaagcccagtctctctctctctctctctctctctctctc
tctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_119346577_119347756
seq2: B6Ng01-300I11.b_46_1209 (reverse)

seq1  CTGCAGGCTGCCACACACAGTAGGTAGAGGACTAACATTACCCCCACCTC  50
      ||||||| |  |||||||  || |||||||||||||||    ||||||| 
seq2  CTGCAGGGTTGCACACACCATA-GTAGAGGACTAACAT---ACCCACCT-  45

seq1  TACCTGTCCCAAGAGACAGATAACTGATGTTTGTTTGTTTGTTTGTTTGT  100
      |||||| ||    |||||||||||||| | ||||||| |||||   ||||
seq2  TACCTGGCC---AAGACAGATAACTGAAG-TTGTTTG-TTGTT--GTTGT  88

seq1  TTTAGATACCATCCCGTTATCTTGACTGGGCCAGCACTCA-CATTAGAAC  149
      ||   ||||||||||| |||| |||||||| ||||||||| ||| |||||
seq2  TTAGAATACCATCCCG-TATC-TGACTGGG-CAGCACTCACCATAAGAAC  135

seq1  CCAGGCTCAGCTCAAATTCATAGTAATCCTCCTGTCTCCGCTTCTCAAGT  199
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCAGGCTCAGCTCAAATTCATAGTAATCCTCCTGTCTCCGCCTCTCAAGT  185

seq1  GTTAAGATTACAGGTTTATGCCACAATGCCTCTTAAATTATGTTTTTTTT  249
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TAAGATTACAGGTTTATGCCACAATGCCTCTTAAATTATGTTTTTTTT  234

seq1  TTAAATCCCCATTTTACAAATAAGGAAACTGAAGCACAAACAAGTCATTT  299
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCCCCA-TTTACAAATAAGGAAACTGAAGCACAAACAAGTCATTT  283

seq1  CCCCAAAATCACATAGCTAGCAAAAGAGCCAAAGGTGGTACCGGCTTATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAATCACATAGCTAGCAAAAGAGCCAAAGGTGGTACCGGCTTATA  333

seq1  ATCTCAGCTCAAACTTGACACACTATGATCTTAACCAAATCCATGTGGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGCTCAAACTTGACACACTATGATCTTAACCAAATCCATGTGGTA  383

seq1  CCGGCTTATAATCTCAGCTCAAACTTGACACACTATGATCTTAACCAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCTTATAATCTCAGCTCAAACTTGACACACTATGATCTTAACCAAAT  433

seq1  CCATGGACTCTCCTGGAAGTCTGGCAAGGGCCACTAGACTCAAAAACAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGACTCTCCTGGAAGTCTGGCAAGGGCCACTAGACTCAAAAACAAA  483

seq1  GATGTTCTTCTATTATTACAGTCTCAGTACTTGGAATATGTCTGTTCAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCTTCTATTATTACAGTCTCAGTACTTGGAATATGTCTGTTCAAG  533

seq1  AAATTTTTACCTTTTTGGGGTTTTTTTGTTTGTTTGGTTGGTTGGTTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTACCTTTTTGGGGTTTTTTTGTTTGTTTGGTTGGTTGGTTTTT  583

seq1  GGTTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCCG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCCG  633

seq1  GATCTCACTCTGTAGACCAGGCTGGCCTTGCACTCAGAAATCCGCCTGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCACTCTGTAGACCAGGCTGGCCTTGCACTCAGAAATCCGCCTGCC  683

seq1  TCTGCCTCCCGAGTGCTGGGATGAAAGGCGTGCGCCACCACACCTGGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCGAGTGCTGGGATGAAAGGCGTGCGCCACCACACCTGGCAA  733

seq1  TTTTTACCTTTTTACAAACAAATTGGTCCAGTAGTAATGTAAGAGAAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACCTTTTTACAAACAAATTGGTCCAGTAGTAATGTAAGAGAAGAA  783

seq1  AAGAGTGGGCGATGGTTCTGTAGCACAGTTGCCACTGGCGGCCACACCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGGGCGATGGTTCTGTAGCACAGTTGCCACTGGCGGCCACACCAA  833

seq1  AAACCTTTCAAGAGCTGCTCTTTTTCAGGGACGATGTATACTCTAGCACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTCAAGAGCTGCTCTTTTTCAGGGACGATGTATACTCTAGCACT  883

seq1  GGGTGCCCTTGGAAGCCAGAGGCATCAGACCTCCTGGAGCTGGAGTTACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCCCTTGGAAGCCAGAGGCATCAGACCTCCTGGAGCTGGAGTTACA  933

seq1  GATGAGTATGAACTGCCTGACCTGTGGGTGCTGGGAACTGGACTCAGGTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTATGAACTGCCTGACCTGTGGGTGCTGGGAACTGGACTCAGGTC  983

seq1  CTCTGGAAGAACAGTGCATGCTCTTAACCACTGCGCCATCTCTCCATCCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAGAACAGTGCATGCTCTTAACCACTGCGCCATCTCTCCATCCC  1033

seq1  TGGGATGTGGTTTCTTCTTTCTTCTCCCCACTCAAATAAAGAAAATAGAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGTGGTTTCTTCTTTCTTCTCCCCACTCAAATAAAGAAAATAGAT  1083

seq1  GGGGTATTGGGATTGTTTATTAATTAGATAGTTATTTTTGAGATAGGCTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTATTGGGATTGTTTATTAATTAGATAGTTATTTTTGAGATAGGCTC  1133

seq1  TCTCAGTGTAGCCCTAGCTTGCCTGGAATTC  1180
      |||||||||||||||||||||||||||||||
seq2  TCTCAGTGTAGCCCTAGCTTGCCTGGAATTC  1164

seq1: chr15_91063435_91063475
seq2: B6Ng01-300I11.g_591_631 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTG  41
      |||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTG  41