BAC Information

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BAC

Clone NameB6Ng01-301P15
Chromosome15 (Build37)
Map Location 94,867,851 - 94,868,730
singlet/doubletsinglet
Overlap geneTmem117
Upstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1
Downstream geneLOC100043315, Nell2, Dbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301P15.bB6Ng01-301P15.g
ACCGA096151GA096152
length1,136878
definitionB6Ng01-301P15.b B6Ng01-301P15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcaaaatcctatacatgactatttcaaagacaggtgaagtcaa
acagtttcttagagacacccacacacactctcccaagagtctttgtcttt
tcttaacccccattcttgcattctgcactaaagtatctttaataaaccct
acctcagctttatactggatcaccctgaatcttttgcacaaagctgagaa
tccactttcacttgaatggaagtccctaaaacagtaaggggtctgcatta
cagctggccacaagcaggctaataagagaaaaatagtagctcactatcat
acattcatacatacataagaaacaaccagagagtaagtagttcacctaga
cattgctttgaattccagcttacactgaaatgtcaacaacatatagtaaa
tgtttagaagaattgtcagatcagatgccaattgttagtcaggcttgtcg
accgttgagaatagacacccgtgcctcatgatcagttttagatcctacct
cccgattccatggtagcatgctaattttaaaaaggagaaatctctttcaa
gtctctgaagaaagaaattaaagaagatctcagaagatggaaagatctcc
catgctcatggattggcaggatcaacattgtaaaaatggctatcttgcca
aaagcaatctacagattcaatgcaatccccatcaaaattccaactcaact
tcaacgaattagaaagagcaatctgcaaattcatctggaataacaaaaaa
ccgaggatagcaaaaactcttctcaaggataaaagaacctctggtggaat
caccatgcctgacctaaagctttactacagagcaattgtgataaaaactg
catggtactggtatagtgacagacaagtagaccaatggaacagaattgaa
gacccagaaatgaacccacacaccctatggtcacttgatcttcgaacaag
ggagctaaaaccatcaagtgtaagaaaagaacagcatttttcaacaaatg
gtgctggcacaactgggttgttatcatgtagaagattgcgaatcgatcca
tacctatctcgtgtactaagggtcaaatccaagtgggatcaggactttcc
acataaaacccagaagaaccactggaaacttataga
gaattctctgcacgcttcctctccagtgataaagataaaggtttctatct
gttaaagttggtcccacgcagcagcaacagcagcagcagcagcagcagcc
gcctccgaagcggctagttatccaaagccgccagcgcctcaagttatcca
acgctgccagtgccactagtttaagggaaaaggagtgtatggatatggtg
atgaaatggttgggaaacttggtagagccagctttggcatagcttcgccg
tctccgggaacacgaaggtagacttggctgtctcagagagctatggcctt
ctgtctcaatgctcacctggggaactggccccagctgcgtcatcataggc
aggacagataaaagcatggagctccgtaccccgccactggctctcagcgg
ctgcagtagccaagtgttgaagctacagctaacaactgtacttatagcta
acaggattttgtactaaaaagaaataaaaattgaatggattaggatagag
atttagaatacaacttttagaataaataaaatgtagaatatgcataacag
tctgaagtatagtgaacgtggtatctatcgcctgtgagtcaggaaaaact
tattcaatatatacttggtcaattagcgtccatttaagggaaaaataaag
ttggatcacaatgtacttcttcataccaaaggaataaacaggcaaagcaa
gggtatgaaggtattaagtaagcaaaaactgctagcagcaagttggtaaa
tgaagtggttaataacctctaaggaggttcagtgtctgtcagttgaggaa
aaccagttgtatggcattttacctagggactctacaagccagagaattgt
ttgcaagactgtggcttggcaggctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94867851_94868730
seq2: B6Ng01-301P15.g_68_945

seq1  GAATTCTCTGCACGCTTCCTCTCCAGTGATAAAGATAAAGGTTTCTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCACGCTTCCTCTCCAGTGATAAAGATAAAGGTTTCTATCT  50

seq1  GTTAAAGTTGGTCCCACGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGTTGGTCCCACGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCC  100

seq1  GCCTCCGAAGCGGCTAGTTATCCAAAGCCGCCAGCGCCTCAAGTTATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCGAAGCGGCTAGTTATCCAAAGCCGCCAGCGCCTCAAGTTATCCA  150

seq1  ACGCTGCCAGTGCCACTAGTTTAAGGGAAAAGGAGTGTATGGATATGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGCCAGTGCCACTAGTTTAAGGGAAAAGGAGTGTATGGATATGGTG  200

seq1  ATGAAATGGTTGGGAAACTTGGTAGAGCCAGCTTTGGCATAGCTTCGCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGGTTGGGAAACTTGGTAGAGCCAGCTTTGGCATAGCTTCGCCG  250

seq1  TCTCCGGGAACACGAAGGTAGACTTGGCTGTCTCAGAGAGCTATGGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGGGAACACGAAGGTAGACTTGGCTGTCTCAGAGAGCTATGGCCTT  300

seq1  CTGTCTCAATGCTCACCTGGGGAACTGGCCCCAGCTGCGTCATCATAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAATGCTCACCTGGGGAACTGGCCCCAGCTGCGTCATCATAGGC  350

seq1  AGGACAGATAAAAGCATGGAGCTCCGTACCCCGCCACTGGCTCTCAGCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGATAAAAGCATGGAGCTCCGTACCCCGCCACTGGCTCTCAGCGG  400

seq1  CTGCAGTAGCCAAGTGTTGAAGCTACAGCTAACAACTGTACTTATAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTAGCCAAGTGTTGAAGCTACAGCTAACAACTGTACTTATAGCTA  450

seq1  ACAGGATTTTGTACTAAAAAGAAATAAAAATTGAATGGATTAGGATAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATTTTGTACTAAAAAGAAATAAAAATTGAATGGATTAGGATAGAG  500

seq1  ATTTAGAATACAACTTTTAGAATAAATAAAATGTAGAATATGCATAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAATACAACTTTTAGAATAAATAAAATGTAGAATATGCATAACAG  550

seq1  TCTGAAGTATAGTGAACGTGGTATCTATCGCCTGTGAGTCAGGAAAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTATAGTGAACGTGGTATCTATCGCCTGTGAGTCAGGAAAAACT  600

seq1  TATTCAATATATACTTGGTCAATTAGCGTCCATTTAA-GGAAAAATAAAG  649
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TATTCAATATATACTTGGTCAATTAGCGTCCATTTAAGGGAAAAATAAAG  650

seq1  TTGGATCACAATGTACTTCTTCATACCAAAGGAATAAACAGGCAAAGCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATCACAATGTACTTCTTCATACCAAAGGAATAAACAGGCAAAGCAA  700

seq1  GGGTATGAAGGTATAAAGTAAGCAAAAACTGCTAGCAGCAAGTTGGTAAA  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGGTATGAAGGTATTAAGTAAGCAAAAACTGCTAGCAGCAAGTTGGTAAA  750

seq1  TGAAGTGGTTAATAACCTCTAAGGAGGTTCAGTGTCTGTCAGTTGAGGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGGTTAATAACCTCTAAGGAGGTTCAGTGTCTGTCAGTTGAGGAA  800

seq1  AACCAGTTGTATGGCATTTTACCTAGGGACTCTACAAGCCAGAGGAATTG  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACCAGTTGTATGGCATTTTACCTAGGGACTCTACAAGCCAGA-GAATTG  849

seq1  TTTGCAAGGACTGTGGCTTGGCAGGGCTCTC  880
      ||||||| ||||||||||||||| |||||||
seq2  TTTGCAA-GACTGTGGCTTGGCA-GGCTCTC  878