BAC Information

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BAC

Clone NameB6Ng01-303L03
Chromosome15 (Build37)
Map Location 71,557,315 - 71,558,467
singlet/doubletsinglet
Overlap geneLOC100040847
Upstream geneLOC383051, 1700010C24Rik
Downstream geneCol22a1, Kcnk9, 1810044A24Rik, LOC665621
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303L03.bB6Ng01-303L03.g
ACCGA097435GA097436
length1,1581,171
definitionB6Ng01-303L03.b B6Ng01-303L03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccttaaccacattcacaaccttgcctcgggcaccttagctcggg
ctgccaggaggccgcggtggccgggcagctgttgcaccaagagggggcag
ctgcggagttccataaccatagcaaccgcatcagcaccacggcggcagtg
gcggcggcggcggcggtgagggcagcatccgcttgctcctcctccagtca
gcctctcggtagagacctgagacagctcgcaggtgccgccaccgactcct
tggtccgcccacagtcgctgccggtgttggctgctggagaaggagaccag
aagagagcgggaccagagctggaacagggccctaggaggtgagagagaga
gccctgcagtgggagacaggtaggtgagaacgctgtgggggtcaccagct
gtaaaactctttctgtggcagtgacgtttctggaagcgtggttgctagtt
ggatggctttctattactgagtagagattcttccgcgatttttttaaaaa
atatatctttctctattttcccctcagatatctctgccctctgatcttgc
cccacttctgggcaaagcttagagacaagaaggaccattaaatgtgattg
tgtgaatgtggtggtcctaaggggcttatttagacctgttcaggtcctct
gagccactgaacccaggacaggctcaaaagaagaccttgtggaggtggag
gggctatggtctctgttctatgtggggcaaagctgactcagagaccatct
ctttggagggtggagagcaccgtagttcatctgtggcatggaaaggggct
ataacacacagtagctctttatatgtatagcagtctttaaaaaacaacca
ctgcagggggtgtttagaccaggtagtagtaactcttaaggtttggggta
tgcccagagtttactattctatagataagatgttttggtcattgggggga
ttggatgttaacagaaattaaaattttaaccagaaatggagataagaaca
ccacccccattctctttcactactttttcctccctctctgatgcagcaaa
caaacactgttatggtgttagaggacaccctctgtctggccctttgctac
ctaaagaacttatcttacctttcggacgatggggaagagaactcacgttc
aatccctc
gaattctcctctgaagaaacagactgggaggaagaagcagctcattacca
gccagataaagtgctagctaatcggtcaagaaaaaagccaaaagcggctg
gcgaaggccagcatgctgttcagcctccgggcagtcggcttcaaggtccg
ccctatgcggagcccccgccctgcgtagtgcgtcagccctgcggagagag
acaatgcgcagagagacaatgcgcagagagacaatgcgcagagagacaat
gcgcagagaggcaatgcgcagactcattcattcccagagaggaacaaagg
aaaatacaacaggcatttccggtctttgaaggagccgagggtgggcgtgt
ccacgctctggtagaatatgtgcagattaaagaacttgccgagtcggtcc
gtaaatacggaaccaatgctaattttaccttggtgcagttagacaggttt
gccggcatggcactaactcctgccgactggcaaacgattgtaaaagccgc
tctccctagtatgggcaaatatatggaatggagagctctttggcatgaag
ctgcacaagcgcaggcccgagcaaacgcagctgctttgactccagagcag
agagattggacttttgacttgttaacgggtcagggagcttattctgctga
tcaaacaaactaccattggggagcttatgcccaaatttcctccacggcta
ttagggcctggaaggcgctctcccgagcaggtgaagccactggacaatta
acaaagatcgtccagggacctcagagtccttctcagattttgtggccaga
atgacagaggcagcagagcgtatttttggagactcagagcaagctgcacc
tctggtagaacagctcatctatgagcaagccacaaaggagtgccgagcgg
gccatagccccaagaaagaacaaaggcttacaagactggctcagagtttg
tcgagagcttgggggacctctcagcaatgcaagttagcggctgccatctc
aatccaaaacgctccatgggcagaaatgatcagaggacatgttttactgt
gaaagctgggcatcttaagaaaagatgcagagcttcagaataaacaggag
ggtactcctcactctgcctagttgcaggcttaatcataagaggacgacac
aggtgttccgcctctctgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_71557315_71558467
seq2: B6Ng01-303L03.b_46_1203 (reverse)

seq1  GAGGGATTGAAGTGGAGTTCTCTTCCCCATCTGTCTGAAA-GTAGGAT-A  48
      |||||||||||   ||||||||||||||||| ||| |||| ||| ||| |
seq2  GAGGGATTGAACGTGAGTTCTCTTCCCCATC-GTCCGAAAGGTAAGATAA  49

seq1  GTTCTTTA-GTAGCCAAGGGCCAGACAGAGGGTGT-CTCTAACACCAT-A  95
      |||||||| ||||| |||||||||||||||||||| |||||||||||| |
seq2  GTTCTTTAGGTAGCAAAGGGCCAGACAGAGGGTGTCCTCTAACACCATAA  99

seq1  CAGTGTTTGTTTTGCTGGCATCAGAGAGGGAGGAAAAAGTAGGTGAAGAG  145
      ||||||||| |||||| |||||||||||||||||||||||||   |||||
seq2  CAGTGTTTG-TTTGCT-GCATCAGAGAGGGAGGAAAAAGTAGTGAAAGAG  147

seq1  AATGGGGGTGGTGTTCTTATCTCCA-TTCTGGTTAAAATTTT-ATTTCTG  193
      ||||||||||||||||||||||||| |||||||||||||||| |||||||
seq2  AATGGGGGTGGTGTTCTTATCTCCATTTCTGGTTAAAATTTTAATTTCTG  197

seq1  TTAACATCCAAT-CCCCCAATGACCAAAACATCTTATCTATAGAATAGTA  242
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTAACATCCAATCCCCCCAATGACCAAAACATCTTATCTATAGAATAGTA  247

seq1  AACTCTGGGCATACCCCAAACCTTAAGAGTTACTACTACCTGGTCTAAAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGGCATACCCCAAACCTTAAGAGTTACTACTACCTGGTCTAAAC  297

seq1  ACCCCCTGCAGTGGTTGTTTTTTAAAGACTGCTATACATATAAAGAGCTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTGCAGTGGTTGTTTTTTAAAGACTGCTATACATATAAAGAGCTA  347

seq1  CTGTGTGTTATAGCCCCTTTCCATGCCACAGATGAACTACGGTGCTCTCC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTTATAGCCCCTTTCCATGCCACAGATGAACTACGGTGCTCTCC  397

seq1  ACCCTCCAAAGAGATGGTCTCTGAGTCAGCTTTGCCCCACATAGAACAGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCAAAGAGATGGTCTCTGAGTCAGCTTTGCCCCACATAGAACAGA  447

seq1  GACCATAGCCCCTCCACCTCCACAAGGTCTTCTTTTGAGCCTGTCCTGGG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATAGCCCCTCCACCTCCACAAGGTCTTCTTTTGAGCCTGTCCTGGG  497

seq1  TTCAGTGGCTCAGAGGACCTGAACAGGTCTAAATAAGCCCCTTAGGACCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGGCTCAGAGGACCTGAACAGGTCTAAATAAGCCCCTTAGGACCA  547

seq1  CCACATTCACACAATCACATTTAATGGTCCTTCTTGTCTCTAAGCTTTGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTCACACAATCACATTTAATGGTCCTTCTTGTCTCTAAGCTTTGC  597

seq1  CCAGAAGTGGGGCAAGATCAGAGGGCAGAGATATCTGAGGGGAAAATAGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGTGGGGCAAGATCAGAGGGCAGAGATATCTGAGGGGAAAATAGA  647

seq1  GAAAGATATATTTTTTAAAAAAATCGCGGAAGAATCTCTACTCAGTAATA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATATATTTTTTAAAAAAATCGCGGAAGAATCTCTACTCAGTAATA  697

seq1  GAAAGCCATCCAACTAGCAACCACGCTTCCAGAAACGTCACTGCCACAGA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCATCCAACTAGCAACCACGCTTCCAGAAACGTCACTGCCACAGA  747

seq1  AAGAGTTTTACAGCTGGTGACCCCCACAGCGTTCTCACCTACCTGTCTCC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTTACAGCTGGTGACCCCCACAGCGTTCTCACCTACCTGTCTCC  797

seq1  CACTGCAGGGCTCTCTCTCTCACCTCCTAGGGCCCTGTTCCAGCTCTGGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGGGCTCTCTCTCTCACCTCCTAGGGCCCTGTTCCAGCTCTGGT  847

seq1  CCCGCTCTCTTCTGGTCTCCTTCTCCAGCAGCCAACACCGGCAGCGACTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTCTCTTCTGGTCTCCTTCTCCAGCAGCCAACACCGGCAGCGACTG  897

seq1  TGGGCGGACCAAGGAGTCGGTGGCGGCACCTGCGAGCTGTCTCAGGTCTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGGACCAAGGAGTCGGTGGCGGCACCTGCGAGCTGTCTCAGGTCTC  947

seq1  TACCGAGAGGCTGACTGGAGGAGGAGCAAGCGGATGCTGCCCTCACCGCC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGAGAGGCTGACTGGAGGAGGAGCAAGCGGATGCTGCCCTCACCGCC  997

seq1  GCCGCCGCCGCCACTGCCGCCGTGGTGCTGATGCGGTTGCTATGGTTATG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCGCCGCCACTGCCGCCGTGGTGCTGATGCGGTTGCTATGGTTATG  1047

seq1  GAACTCCGCAGCTGCCCCCTCTTGGTGCAACAGCTGCCCGGCCACCGCGG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCGCAGCTGCCCCCTCTTGGTGCAACAGCTGCCCGGCCACCGCGG  1097

seq1  CCTCCTGGCAGCCCGAGCTAAGGTGCCCGAGGCAAGGTTGTGAATGTGGT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGCAGCCCGAGCTAAGGTGCCCGAGGCAAGGTTGTGAATGTGGT  1147

seq1  TAAGGGAATTC  1153
      |||||||||||
seq2  TAAGGGAATTC  1158