BAC Information

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BAC

Clone NameB6Ng01-304M24
Chromosome15 (Build37)
Map Location 71,122,899 - 71,124,013
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383051, 1700010C24Rik, LOC100040847, Col22a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304M24.bB6Ng01-304M24.g
ACCGA098262GA098263
length1,2241,119
definitionB6Ng01-304M24.b B6Ng01-304M24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggacaggaactcacacagggtaggaacttggaggcaggactgg
atgcagaatccatagaggaatgctgcttactggattgctttccttggttt
gctttgttatagaatccaggactaccagccaagggatggcaccagccaca
ataggccctcccacccttgatcactaattgagaaaatgtgatcactaatt
gagaaaatgccttacagctggatctcatggaggcacatcctcaagggagg
ctcctttctctgtgataactccaggttgtgtcagttgacacacaaaatca
gcaagtacaatatatttacttttaattctttgaataatagtttgacatgg
acatcattttcagatcctatttacagataagacacaatatggtaagtgac
ttgcctacaatcataagtacatagaggaaaatctaaaacatcaaagctta
gtgttcattattttaaattttaagccttgatctaataactgctgaaagca
gattgaactttgtggactgctgtgaagcaatgtcctgttttcattgttta
gggctaagataaattatcttgactaaagccaactttaatgggaaaatgtt
tatttggcttacaatgtgtaagttcatcattacaggaaagtcaaggtggt
aacttgatgcaggtagttacataacatccataatcaaggacaaagagagt
aaatgcaaacagaatccttctcaactaaccttctgcactcttttacaacc
caacactcaaatgaaatgatgccattcatggtgaactggatctctccaca
tttatcatgtaatcaagttaattccccacagacacgcacacaaaccaacc
tgttctataccagcctacattgagactcctttcaggatgattctacattg
tgtcaacatgacaattaaaaggagctatcacaaagcaactttgcataata
cttgaaatatataaaaagttcttcttatcacagttcagtgaagtttattt
tttatttacttttattttatgatgcagcatttgcaaccatgaacactcag
cacaaagtcccctgtgcacaatctgcacacacacaactaccacacacatc
aacaccaaacagttgaaaagtagctatgcactagctgggagtgatacgga
acttgaagaagccagattattgcgaatgtgatatgttctatgtacctacc
accactgtgtgaatacatagctgc
gaattcacctctttcccagagaagaaagcaaagcatacttcccatgaggc
ttagaactcccaccattagggctggtaaaaaagcccaggagttaagaata
cttgatgttctagcagagaatccaagtttacttcccaacactcatatcag
gtgagtcacagctacctgcaacttctgtttaagggaatcccacatactct
ctggccttgagtggcacctggcacctggtgcctggcatacacttatgcag
gcatacacaggcacacaaacaaatataaataaatatatgttttgaaaagt
accacctccaagcagatccacagcagggaccaagtttttatcacaaggac
ctttggggtgatacttaaaatcctcactaagttaaacacggtgatgaatg
actataacccagctctgaggaggctaattctatgacttgaaggccaacct
agattgcatagtgaattcaaaatcagcacgaaatggatagaacaatccca
tctcaaacacacaaacaaacaaatggggggaaggaggcagagagatggct
caacagttaagaacatattctgcttttatagaggagccaaattaattccc
cagaattctaatgagatgttcagaatttcctgtaagggacattcagggga
tctggcacttttagcctttgcatacacatgtatacacacacacagacaca
caattaaatattagaatattaagaataataattatgatcattcacaaata
ccacactattattttaaatactataaatgtaaggaatgattttattgtcc
tattattcctatttttctttttatttatagtattaaattataattttatt
ggatactttatttatttacatttcaaatgttatcccctttcgctatttcc
accctagaaatcctctatcccacccccccctcctcctgcttctatgaggg
tgtacacccaccaccaactccggactccctgccctcacattcccctacat
tgaggcatcaagacttcaatgggacaggagccttctttctccaattgatg
tcaggcatattatgcttgttatatatgctacatatacagcttggagccta
atgggtcctcatgtgtact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_71122899_71124013
seq2: B6Ng01-304M24.g_68_1186

seq1  GAATTCACCTCTTTCCCAGAGAAGAAAGCAAAGCATACTTCCCATGAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTCTTTCCCAGAGAAGAAAGCAAAGCATACTTCCCATGAGGC  50

seq1  TTAGAACTCCCACCATTAGGGCTGGTAAAAAAGCCCAGGAGTTAAGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACTCCCACCATTAGGGCTGGTAAAAAAGCCCAGGAGTTAAGAATA  100

seq1  CTTGATGTTCTAGCAGAGAATCCAAGTTTACTTCCCAACACTCATATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGTTCTAGCAGAGAATCCAAGTTTACTTCCCAACACTCATATCAG  150

seq1  GTGAGTCACAGCTACCTGCAACTTCTGTTTAAGGGAATCCCACATACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCACAGCTACCTGCAACTTCTGTTTAAGGGAATCCCACATACTCT  200

seq1  CTGGCCTTGAGTGGCACCTGGCACCTGGTGCCTGGCATACACTTATGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTGAGTGGCACCTGGCACCTGGTGCCTGGCATACACTTATGCAG  250

seq1  GCATACACAGGCACACAAACAAATATAAATAAATATATGTTTTGAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACACAGGCACACAAACAAATATAAATAAATATATGTTTTGAAAAGT  300

seq1  ACCACCTCCAAGCAGATCCACAGCAGGGACCAAGTTTTTATCACAAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTCCAAGCAGATCCACAGCAGGGACCAAGTTTTTATCACAAGGAC  350

seq1  CTTTGGGGTGATACTTAAAATCCTCACTAAGTTAAACACGGTGATGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGGTGATACTTAAAATCCTCACTAAGTTAAACACGGTGATGAATG  400

seq1  ACTATAACCCAGCTCTGAGGAGGCTAATTCTATGACTTGAAGGCCAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAACCCAGCTCTGAGGAGGCTAATTCTATGACTTGAAGGCCAACCT  450

seq1  AGATTGCATAGTGAATTCAAAATCAGCACGAAATGGATAGAACAATCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCATAGTGAATTCAAAATCAGCACGAAATGGATAGAACAATCCCA  500

seq1  TCTCAAACACACAAACAAACAAATGGGGGGAAGGAGGCAGAGAGATGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAACACACAAACAAACAAATGGGGGGAAGGAGGCAGAGAGATGGCT  550

seq1  CAACAGTTAAGAACATATTCTGCTTTTATAGAGGAGCCAAATTAATTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTTAAGAACATATTCTGCTTTTATAGAGGAGCCAAATTAATTCCC  600

seq1  CAGAATTCTAATGAGATGTTCAGAATTTCCTGTAAGGGACATTCAGGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTCTAATGAGATGTTCAGAATTTCCTGTAAGGGACATTCAGGGGA  650

seq1  TCTGGCACTTTTAGCCTTTGCATACACATGTATACACACACACAGACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCACTTTTAGCCTTTGCATACACATGTATACACACACACAGACACA  700

seq1  CAATTAAATATTAGAATATTAAGAATAATAATTATGATCATTCACAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAATATTAGAATATTAAGAATAATAATTATGATCATTCACAAATA  750

seq1  CCACACTATTATTTTAAATACTATAAATGTAAGGAATGATTTTATTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTATTATTTTAAATACTATAAATGTAAGGAATGATTTTATTGTCC  800

seq1  TATTATTCCTATTTTTCTTTTTATTTATAGTATTAAATTATAATTTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCCTATTTTTCTTTTTATTTATAGTATTAAATTATAATTTTATT  850

seq1  GGATACTTTATTTATTTACATTTCAAATGTTATCCCCTTTCGCTATTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTTTATTTATTTACATTTCAAATGTTATCCCCTTTCGCTATTTCC  900

seq1  ACCCTAGAAATCCTCTATCCCA-CCCCCCCTCCTCCTGCTTCTATGAGGG  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACCCTAGAAATCCTCTATCCCACCCCCCCCTCCTCCTGCTTCTATGAGGG  950

seq1  TGTACACCCACCCACCCACTCCCGACTCCCTGCCCTCACATTCCCCTACA  999
      |||||||||| ||||| ||||| |||||||||||||||||||||||||||
seq2  TGTACACCCA-CCACCAACTCCGGACTCCCTGCCCTCACATTCCCCTACA  999

seq1  TTGAGGCATCAAGACTTCAATGGACCAAGAGCCT--CTTCTCCCATTGAT  1047
      |||||||||||||||||||||||  || ||||||   |||||| ||||||
seq2  TTGAGGCATCAAGACTTCAATGGGACAGGAGCCTTCTTTCTCCAATTGAT  1049

seq1  GTCCAAGGCATA-TATGCT--GTATATATGCTACATATACAGC-TGGAGC  1093
      |||  ||||||| ||||||   ||||||||||||||||||||| ||||||
seq2  GTC--AGGCATATTATGCTTGTTATATATGCTACATATACAGCTTGGAGC  1097

seq1  --TATGGGTCCCTCCATGTGTACT  1115
         ||||||||   ||||||||||
seq2  CTAATGGGTCC--TCATGTGTACT  1119