BAC Information

Click to search

BAC

Clone NameB6Ng01-306H23
Chromosome15 (Build37)
Map Location 95,549,841 - 95,741,246
singlet/doubletdoublet
Overlap geneEG629300, LOC667864, Tmem16f, LOC100043329
Upstream geneTmem117, LOC100043315, Nell2, Dbx2, LOC100042684, LOC667849
Downstream geneD030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2, Sfrs2ip, Slc38a1, Slc38a2, LOC667941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306H23.bB6Ng01-306H23.g
ACCGA099517GA099518
length1,129808
definitionB6Ng01-306H23.b B6Ng01-306H23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,549,841 - 95,550,977)(95,740,703 - 95,741,246)
sequence
gaattcagcctggcccatccttgagtcatcaatccatgacacctgggaag
tgctcagtaaaggtataatagatggagaagcacagatctgacctctctgg
aatgaagaccacaggtttatctgcccatattaaatgattttttaatgtca
caactggagaacccatggaaggtgaatacatgatactctcactattaata
atacaaatgggaacctgtgaggataactgcgacactttctttattccttc
caaatattatgaatcaacttgctggtattcaagaaatacaacacactata
agaagatacagagagctgagaacaggctggggaaatcagacatcacacat
ctatttatcacgtagggtgtctcatacggagcttaactgacaagcaacaa
ccagttgatctaattacctttcagaccctaacactagccttttgtcctga
tgccttcccagcatggcacctttgccacccaatatctccccagtgtgaca
catctctgcaggtgagtgctcagaattagacttttctctgttactttttt
tgttgctatgataagacaacatgaccatggcaacttatacaaggagatgt
ctatttctgacttacagtctcagaggaattagagtccatccccatcatgt
cagagaacattgcagcatgtgggaatatcccagcagcagcagcagcagca
gctcagaactcacatcacaatccacaagcagagaatgtactcctaaagcc
acccactccaaaagcacctcccccaacaaggccacacctcttaatccttc
ccaaacagttcctggagaccaagtattcaaacatacaagtctataagtac
cactagcattcaaaccaagaaagcaaaatttccatataaaatgatcttac
attattagttgaaatgtatcacctataaaaggaatgtattgatgttcact
acaggtagatttactcttccaagatttatttaacatttttaaacattagt
catttattttttaagtatttcaaagtaagcactcatttatattacttttc
atcccgtactctgcttcaatttctccaatgctgcccactccctctaattt
atgacctcttattggttacttgaaaaaaa
gaattcccattcttgaggcagtcctgtaaggggagggttctgtggctaag
gtctttttccccaattggttcttgacttgtcaataaagaagacgagggag
ccaattgtaagacgaaaggtacaagtgggaccgtctggtcccaagaggag
aaggagatgcaggaaaagagaaaggggcttttttttttttttttttgtca
tgctttgcgtaacacaccacaatcatgttggatcttagggcagctagagc
ctgcggcgggtggtcaaacatgtttggcaggggaaaaccagtaggtttag
ggcagaagattataaagattatgaagattataaattggcgagggcatgtc
tttccaggtgggagatatctgtgcacaacaattgtgccacaagagacaag
ctataaagtgacaaactgagtgtgtctcttttatctgggaattcaaggat
caaggatcttgggtggggctgaattcccattcatgaggcagccctgaaac
cccttctggaacaagagtcttgggagtgggctggagtgtttgatcccaga
gctaggctgggaggaacaaaagagaggcaggaggagctggtaactcggcc
acagctcccatgctaaggcaatagtatgactttaaaactatgcacaacac
agctctctcactgatgacagatgagaagggtgaatgaggtttttgggatt
ctcttgtcttgttttgtttgttcgttgtgttgtgtttgttttgctggctt
tgccttgtttttgcaacagccccatgctgctggacaaaggccataacagt
ccaggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_95549841_95550977
seq2: B6Ng01-306H23.b_46_1174

seq1  GAATTCAGCCTGGCCCATCCTTGAGTCATCAATCCATGACACCTGGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTGGCCCATCCTTGAGTCATCAATCCATGACACCTGGGAAG  50

seq1  TGCTCAGTAAAGGTATAATAGATGGAGAAGCACAGATCTGACCTCTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGTAAAGGTATAATAGATGGAGAAGCACAGATCTGACCTCTCTGG  100

seq1  AATGAAGACCACAGGTTTATCTGCCCATATTAAATGATTTTTTAATGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGACCACAGGTTTATCTGCCCATATTAAATGATTTTTTAATGTCA  150

seq1  CAACTGGAGAACCCATGGAAGGTGAATACATGATACTCTCACTATTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGAGAACCCATGGAAGGTGAATACATGATACTCTCACTATTAATA  200

seq1  ATACAAATGGGAACCTGTGAGGATAACTGCGACACTTTCTTTATTCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATGGGAACCTGTGAGGATAACTGCGACACTTTCTTTATTCCTTC  250

seq1  CAAATATTATGAATCAACTTGCTGGTATTCAAGAAATACAACACACTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTATGAATCAACTTGCTGGTATTCAAGAAATACAACACACTATA  300

seq1  AGAAGATACAGAGAGCTGAGAACAGGCTGGGGAAATCAGACATCACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATACAGAGAGCTGAGAACAGGCTGGGGAAATCAGACATCACACAT  350

seq1  CTATTTATCACGTAGGGTGTCTCATACGGAGCTTAACTGACAAGCAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATCACGTAGGGTGTCTCATACGGAGCTTAACTGACAAGCAACAA  400

seq1  CCAGTTGATCTAATTACCTTTCAGACCCTAACACTAGCCTTTTGTCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGATCTAATTACCTTTCAGACCCTAACACTAGCCTTTTGTCCTGA  450

seq1  TGCCTTCCCAGCATGGCACCTTTGCCACCCAATATCTCCCCAGTGTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCCAGCATGGCACCTTTGCCACCCAATATCTCCCCAGTGTGACA  500

seq1  CATCTCTGCAGGTGAGTGCTCAGAATTAGACTTTTCTCTGTTACTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGCAGGTGAGTGCTCAGAATTAGACTTTTCTCTGTTACTTTTTT  550

seq1  TGTTGCTATGATAAGACAACATGACCATGGCAACTTATACAAGGAGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTATGATAAGACAACATGACCATGGCAACTTATACAAGGAGATGT  600

seq1  CTATTTCTGACTTACAGTCTCAGAGGAATTAGAGTCCATCCCCATCATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTGACTTACAGTCTCAGAGGAATTAGAGTCCATCCCCATCATGT  650

seq1  CAGAGAACATTGCAGCATGTGGGAATATCCCAGCAGCAGCAGCAGCAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACATTGCAGCATGTGGGAATATCCCAGCAGCAGCAGCAGCAGCA  700

seq1  GCTCAGAACTCACATCACAATCCACAAGCAGAGAATGTACTCCTAAAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAACTCACATCACAATCCACAAGCAGAGAATGTACTCCTAAAGCC  750

seq1  ACCCACTCCAAAAGCACCTCCCCCAACAAGGCCACACCTCTTAATCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCCAAAAGCACCTCCCCCAACAAGGCCACACCTCTTAATCCTTC  800

seq1  CCAAACAGTTCCTGGAGACCAAGTATTCAAACATACAAGTCTATAAGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAGTTCCTGGAGACCAAGTATTCAAACATACAAGTCTATAAGTAC  850

seq1  CACTAGCATTCAAACCAAGAAAGCAAAATTTCCATATAAAATGATCTTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCATTCAAACCAAGAAAGCAAAATTTCCATATAAAATGATCTTAC  900

seq1  ATTATTAGTTGAAATGTTATCACCTATAAAAGGAATGTATTGATGTTCAC  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATTATTAGTTGAAATG-TATCACCTATAAAAGGAATGTATTGATGTTCAC  949

seq1  TACAGGTAGATTTACTCTTCCAAGATTTATTTAACATTTTTAAACATTTA  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TACAGGTAGATTTACTCTTCCAAGATTTATTTAACATTTTTAAACA-TTA  998

seq1  GTTCATTTA-TTTTTAAGTATTTCAAAAGTAAGCACTCAATTTATA-TAC  1048
      | ||||||| |||||||||||||| ||||||||||||| ||||||| |||
seq2  G-TCATTTATTTTTTAAGTATTTC-AAAGTAAGCACTC-ATTTATATTAC  1045

seq1  TTTTCATCCCGTACTCCTGCTTCAATTTCTCCCATGCTGCCCACTTCCTC  1098
      ||||||||||||||| |||||||||||||||| |||||||||||| ||||
seq2  TTTTCATCCCGTACT-CTGCTTCAATTTCTCCAATGCTGCCCACTCCCTC  1094

seq1  TCAATTTTATGACCTCTTATTTTGGTTACTTTAAAAAAA  1137
      |  | ||||||||||||||  |||||||||| |||||||
seq2  T--AATTTATGACCTCTTA--TTGGTTACTTGAAAAAAA  1129

seq1: chr15_95740703_95741246
seq2: B6Ng01-306H23.g_334_874 (reverse)

seq1  ACCCCTGGACTGTTATGGCCTTTGTCCAGCAGCATGGGGCTGTTGCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGGACTGTTATGGCCTTTGTCCAGCAGCATGGGGCTGTTGCAAAA  50

seq1  ACAAGGCAAAGCCAAGCAAAACAAAACACAACACAACGAACAAAACAAAA  100
      ||||||||||||| |||||||| |||||||||||||||||| ||||||||
seq2  ACAAGGCAAAGCC-AGCAAAAC-AAACACAACACAACGAAC-AAACAAAA  97

seq1  CAAGACAAGAGAATCCCAAAAACCTCATTCACCCTTCTCATCTGTCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAAGAGAATCCCAAAAACCTCATTCACCCTTCTCATCTGTCATCA  147

seq1  GTGAGAGAGCTGTGTTGTGCATAGTTTTAAAGTCATACTATTGCCTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGAGCTGTGTTGTGCATAGTTTTAAAGTCATACTATTGCCTTAGC  197

seq1  ATGGGAGCTGTGGCCGAGTTACCAGCTCCTCCTGCCTCTCTTTTGTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGCTGTGGCCGAGTTACCAGCTCCTCCTGCCTCTCTTTTGTTCCT  247

seq1  CCCAGCCTAGCTCTGGGATCAAACACTCCAGCCCACTCCCAAGACTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCTAGCTCTGGGATCAAACACTCCAGCCCACTCCCAAGACTCTTG  297

seq1  TTCCAGAAGGGGTTTCAGGGCTGCCTCATGAATGGGAATTCAGCCCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAAGGGGTTTCAGGGCTGCCTCATGAATGGGAATTCAGCCCCACC  347

seq1  CAAGATCCTTGATCCTTGAATTCCCAGATAAAAGAGACACACTCAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCCTTGATCCTTGAATTCCCAGATAAAAGAGACACACTCAGTTTG  397

seq1  TCACTTTATAGCTTGTCTCTTGTGGCACAATTGTTGTGCACAGATATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTATAGCTTGTCTCTTGTGGCACAATTGTTGTGCACAGATATCTC  447

seq1  CCACCTGGAAAGACATGCCCTCGCCAATTTATAATCTTCATAATCTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGGAAAGACATGCCCTCGCCAATTTATAATCTTCATAATCTTTAT  497

seq1  AATCTTCTGCCCTAAACCTACTGGTTTTCCCCTGCCAAACATGT  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCTGCCCTAAACCTACTGGTTTTCCCCTGCCAAACATGT  541