BAC Information

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BAC

Clone NameB6Ng01-307A08
Chromosome15 (Build37)
Map Location 44,111,259 - 44,112,402
singlet/doubletsinglet
Overlap genenone
Upstream geneEif3s6, Ttc35, LOC100039288, Tmem74, LOC100039309, Trhr
Downstream geneLOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik, EG432950, Kcnv1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307A08.bB6Ng01-307A08.g
ACCGA099904GA099905
length1,142542
definitionB6Ng01-307A08.b B6Ng01-307A08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctataccataagataaatgcttagaattgaccaataaatatattg
tgtataataatgatggactatttcataaaaaaaatcaaaagcttttacat
atagtactgggtgatagtttatgataaaatacgtctcttacagttgtgag
gacctgagtttgagttctcagaacccacacaaaccaagagcacatgttta
taattccagtgctaccttgaagatccataatataaagattcaacaatttc
tagaatcttgaaggtcagctagcagcaacttcagatatcctgcctcaaac
aaggtggaaggggacagatactgaaggttgttctttaacctcaacgcaca
caatatggcatgtatacttagactcacacacatgagtgcatacacactat
atacatatatacatattatacattacatatatttacatatacatacacat
acatatgaatagacacaatttatgcacatatccaaacacattcaatcgaa
tacattaagtatttaccatactatttttttgtaataagtcatgtataaac
agaactgtttaaaaaacattctgaccaaatgaaaaaaaattattttagat
tttcttaacttcagcaagagatcaagggagctgacatcccaaggctttct
ctaagtttcaagtaatgaatcatttagaaggaacatctgttgcatttaga
agtaaactactgggagctgaaaacattctttggaaaacagaaaatctgaa
cctgggtcacaaacagttccacaaatagtttccaagattaaaataaaaaa
acagaattagaaccaactctcatgactaccaaccatgtttcaggacacgg
tgccaactctcctgtttttcttcaataacaaaatctgatctttaaaactc
tcttcagagattcaatgaaaatggaattttgaacccgatttttctttgat
tgtaaagcacccccaactctgttctctaaattcaatgtatgtatacaggt
tctttatctgaacgatagttacactgaaaactagaggcacctcctttcct
ggggatcattctaaaggtataatccttatgacagaaaagtagtagcttgc
tataagctagtcttgaatcctttgtctgttacggacatctgt

tttgtttagctctgtgccccattttttaatggggttatttgaatttctgg
agtccagcttctttagctctttgtatatattgcaaagtttggtgctaaga
tgaaaggatggactatccagagactactccacccggagatctatcccata
atcagtcaccaaacccagacactattattgtacaatgtgagaaagattta
gctgaagggaccctgttatagctgtcttgtttgagtctatgccagtgcct
ggcaaatacagaaatggatgctcacagtcatctataagatggaacacagg
gcccccaatggagaagctagagaaagcacccaagaagctgaaggggtctg
cagccctataggtggaacaacaatgtgaactaaccattaccctccagagc
tcatatctctagctgcatatgtagcagaagatggcctaattggccatcac
tgggaagagaggccccttggtattgcaaactttatatgccccaatagagg
ggaatgtcagggccaagaagcgggagtgggtgggtaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_44111259_44112402
seq2: B6Ng01-307A08.b_48_1189 (reverse)

seq1  ACAGATTGTCTGTAACAGACACAGGATTC-AGACTAAGCCTTATAGCAAG  49
      ||||| |||| |||||||||| ||||||| ||||||   |||||||||||
seq2  ACAGA-TGTCCGTAACAGACAAAGGATTCAAGACTA--GCTTATAGCAAG  47

seq1  CTTACTACTTTTCTGTCATAA-GATTATACCTTTAAGAATTGATCCCAGG  98
      | ||||||||||||||||||| |||||||||||| |||| |||||||  |
seq2  C-TACTACTTTTCTGTCATAAGGATTATACCTTT-AGAA-TGATCCCCAG  94

seq1  GAAAGGAGGTGCCTCTAGTTTTCAGTGTAACTATCGTTCAGATAAAGAA-  147
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAAGGAGGTGCCTCTAGTTTTCAGTGTAACTATCGTTCAGATAAAGAAC  144

seq1  CTGTATACATACATTGAATTTAGAGAACAGAGTT-GGGGTGCTTTACAAT  196
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGTATACATACATTGAATTTAGAGAACAGAGTTGGGGGTGCTTTACAAT  194

seq1  CAAAGAAAAATCGGGTTCAAAATTCCATTTTCATTGAATCTCTGAAGAGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAAATCGGGTTCAAAATTCCATTTTCATTGAATCTCTGAAGAGA  244

seq1  GTTTTAAAGATCAGATTTTGTTATTGAAGAAAAACAGGAGAGTTGGCACC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAGATCAGATTTTGTTATTGAAGAAAAACAGGAGAGTTGGCACC  294

seq1  GTGTCCTGAAACATGGTTGGTAGTCATGAGAGTTGGTTCTAATTCTGTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTGAAACATGGTTGGTAGTCATGAGAGTTGGTTCTAATTCTGTTT  344

seq1  TTTTATTTTAATCTTGGAAACTATTTGTGGAACTGTTTGTGACCCAGGTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTAATCTTGGAAACTATTTGTGGAACTGTTTGTGACCCAGGTT  394

seq1  CAGATTTTCTGTTTTCCAAAGAATGTTTTCAGCTCCCAGTAGTTTACTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTCTGTTTTCCAAAGAATGTTTTCAGCTCCCAGTAGTTTACTTC  444

seq1  TAAATGCAACAGATGTTCCTTCTAAATGATTCATTACTTGAAACTTAGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCAACAGATGTTCCTTCTAAATGATTCATTACTTGAAACTTAGAG  494

seq1  AAAGCCTTGGGATGTCAGCTCCCTTGATCTCTTGCTGAAGTTAAGAAAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTGGGATGTCAGCTCCCTTGATCTCTTGCTGAAGTTAAGAAAAT  544

seq1  CTAAAATAATTTTTTTTCATTTGGTCAGAATGTTTTTTAAACAGTTCTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATAATTTTTTTTCATTTGGTCAGAATGTTTTTTAAACAGTTCTGT  594

seq1  TTATACATGACTTATTACAAAAAAATAGTATGGTAAATACTTAATGTATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATGACTTATTACAAAAAAATAGTATGGTAAATACTTAATGTATT  644

seq1  CGATTGAATGTGTTTGGATATGTGCATAAATTGTGTCTATTCATATGTAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGAATGTGTTTGGATATGTGCATAAATTGTGTCTATTCATATGTAT  694

seq1  GTGTATGTATATGTAAATATATGTAATGTATAATATGTATATATGTATAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTATATGTAAATATATGTAATGTATAATATGTATATATGTATAT  744

seq1  AGTGTGTATGCACTCATGTGTGTGAGTCTAAGTATACATGCCATATTGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTATGCACTCATGTGTGTGAGTCTAAGTATACATGCCATATTGTG  794

seq1  TGCGTTGAGGTTAAAGAACAACCTTCAGTATCTGTCCCCTTCCACCTTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTGAGGTTAAAGAACAACCTTCAGTATCTGTCCCCTTCCACCTTGT  844

seq1  TTGAGGCAGGATATCTGAAGTTGCTGCTAGCTGACCTTCAAGATTCTAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCAGGATATCTGAAGTTGCTGCTAGCTGACCTTCAAGATTCTAGA  894

seq1  AATTGTTGAATCTTTATATTATGGATCTTCAAGGTAGCACTGGAATTATA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTGAATCTTTATATTATGGATCTTCAAGGTAGCACTGGAATTATA  944

seq1  AACATGTGCTCTTGGTTTGTGTGGGTTCTGAGAACTCAAACTCAGGTCCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTGCTCTTGGTTTGTGTGGGTTCTGAGAACTCAAACTCAGGTCCT  994

seq1  CACAACTGTAAGAGACGTATTTTATCATAAACTATCACCCAGTACTATAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTGTAAGAGACGTATTTTATCATAAACTATCACCCAGTACTATAT  1044

seq1  GTAAAAGCTTTTGATTTTTTTTATGAAATAGTCCATCATTATTATACACA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGCTTTTGATTTTTTTTATGAAATAGTCCATCATTATTATACACA  1094

seq1  ATATATTTATTGGTCAATTCTAAGCATTTATCTTATGGTATAGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTATTGGTCAATTCTAAGCATTTATCTTATGGTATAGAATTC  1142


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