BAC Information

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BAC

Clone NameB6Ng01-314K09
Chromosome15 (Build37)
Map Location 64,867,564 - 64,980,859
singlet/doubletdoublet
Overlap genenone
Upstream gene0910001A06Rik, Ddef1, Adcy8, LOC268812
Downstream geneLOC100040790, LOC665836, C920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314K09.bB6Ng01-314K09.g
ACCGA105517GA105518
length1,110883
definitionB6Ng01-314K09.b B6Ng01-314K09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,867,564 - 64,868,680)(64,979,978 - 64,980,859)
sequence
gaattctaaaatcctgcctctgtctgacctcttagatgttggctgtttgc
ttctttatttgccaatcagaaccaagtggggtcaggttcccagaagctat
gtgcagacacactcatgtaagcaggatttttgggggaacacaattagcac
ttgtaattcaagcagctatacacagaagaaaggagagagatagagggagg
gagagaaagatcagctaaagacaaatgtgaatacaaacacactacagtat
gaaaacagaataatgagatgtcaggaaaacctctctgatatacacaaaag
tcatgagcaagcctactctatgtacactctattaagaggaaacttctttc
tcaaagacactgtagcagagactgggtaactgtggcatacaaagtgttaa
gagctagaatggaggtggcaaagagggaagtgggaccaggtaatgtcata
gagatggtcactaacccatttcatagctgtgtgtaaaatgcaatcacttt
cctctgtaaaagtccttttaaattttcatctaaaatatgttcttcccata
gacttgagtgcattaccatatacataaaatcacacatacatacatgtaca
tatacacacataaacacacataatcatatacaatattataatacatacag
acatacacatatatgtatacatatatatgtatatataaatcatacaaaca
tatatacacacaagcacacacatatatatgtatatatacatacatatata
catacatatacatgaacacaaacacacattctttgtaaataactagattt
aacagaaccctggctttttttctataaatacaaacaagaaataataataa
agtaagttagtcaatgtctatacttctgaaacttttttgcatcttttgtg
tcgctcttaaagctttgaacctaaaatttaatgttattttggttgatctc
aaattctctttaaaatttttttatttgatgaattttatttttcttaaaaa
ttaatacacgatactgtatttaacatcatttctaatactcttctcttctt
catccaactctctggtgccctacccactccactcttattccaagaacctc
tcgatataaa

gaattctctaggcatcttgtatgttcatgggcatctttttctcatgggtc
agggaagttttcttctataattttttctataattttgttgaagatatttg
ttggccctttaagttgaaaatcttcactcctattatccttaggtttggtc
ttctcattgtgtcctggatttcttggattttttcagttattatcattttg
cattttctttgattgttgtgtccatgtttcctatggaatctcctgcaaaa
ggttagaattctgatgaacaattttctttggctatatgggagaactgagg
tcacagggaatggagcaatccaaaattagagagttgtatgagctctggaa
aatacagaaactctggtagtgtattgaggtagtaatttcaacacatttct
ggggccttagtattaaggcatgaaagtggggatctcttgggagccctagt
atttattttattaaaaatataaactaaaatataattgaatcacatctctt
gtctgtttggttaacaaagagacatatgaccaaggcaaatcttaaaagaa
aacatttaaatgtcgattggcttagtttcacaagcttagaccattgtgat
tatggctgaaattatgacagcaggcagacatagtgctggagaagtagctg
agagctacatcctaatgtgcaaggagaaagagtgagatagacaaagacag
aaagatgtagacacacacacagaaagtgaaagaccgagaccgagacagag
atagacagacagacacagagagagaaagggagagaaagacagagatggag
agatacagagacagagagacagagttggagagaaatacaaagagacacgg
ctagagaaagaaagacacagagaaggaaagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_64867564_64868680
seq2: B6Ng01-314K09.b_48_1157

seq1  GAATTCTAAAATCCTGCCTCTGTCTGACCTCTTAGATGTTGGCTGTTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAATCCTGCCTCTGTCTGACCTCTTAGATGTTGGCTGTTTGC  50

seq1  TTCTTTATTTGCCAATCAGAACCAAGTGGGGTCAGGTTCCCAGAAGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTGCCAATCAGAACCAAGTGGGGTCAGGTTCCCAGAAGCTAT  100

seq1  GTGCAGACACACTCATGTAAGCAGGATTTTTGGGGGAACACAATTAGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGACACACTCATGTAAGCAGGATTTTTGGGGGAACACAATTAGCAC  150

seq1  TTGTAATTCAAGCAGCTATACACAGAAGAAAGGAGAGAGATAGAGGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTCAAGCAGCTATACACAGAAGAAAGGAGAGAGATAGAGGGAGG  200

seq1  GAGAGAAAGATCAGCTAAAGACAAATGTGAATACAAACACACTACAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAGATCAGCTAAAGACAAATGTGAATACAAACACACTACAGTAT  250

seq1  GAAAACAGAATAATGAGATGTCAGGAAAACCTCTCTGATATACACAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGAATAATGAGATGTCAGGAAAACCTCTCTGATATACACAAAAG  300

seq1  TCATGAGCAAGCCTACTCTATGTACACTCTATTAAGAGGAAACTTCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGCAAGCCTACTCTATGTACACTCTATTAAGAGGAAACTTCTTTC  350

seq1  TCAAAGACACTGTAGCAGAGACTGGGTAACTGTGGCATACAAAGTGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACACTGTAGCAGAGACTGGGTAACTGTGGCATACAAAGTGTTAA  400

seq1  GAGCTAGAATGGAGGTGGCAAAGAGGGAAGTGGGACCAGGTAATGTCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAGAATGGAGGTGGCAAAGAGGGAAGTGGGACCAGGTAATGTCATA  450

seq1  GAGATGGTCACTAACCCATTTCATAGCTGTGTGTAAAATGCAATCACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGTCACTAACCCATTTCATAGCTGTGTGTAAAATGCAATCACTTT  500

seq1  CCTCTGTAAAAGTCCTTTTAAATTTTCATCTAAAATATGTTCTTCCCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTAAAAGTCCTTTTAAATTTTCATCTAAAATATGTTCTTCCCATA  550

seq1  GACTTGAGTGCATTACCATATACATAAAATCACACATACATACATGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGTGCATTACCATATACATAAAATCACACATACATACATGTACA  600

seq1  TATACACACATAAACACACATAATCATATACAATATTATAATACATACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACATAAACACACATAATCATATACAATATTATAATACATACAG  650

seq1  ACATACACATATATGTATACATATATATGTATATATAAATCATACAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACATATATGTATACATATATATGTATATATAAATCATACAAACA  700

seq1  TATATACACACAAGCACACACATATATATGTATATATACATACATATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACACACAAGCACACACATATATATGTATATATACATACATATATA  750

seq1  CATACATATACATGAACACAAACACACATTCTTTGTAAATAACTAGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATATACATGAACACAAACACACATTCTTTGTAAATAACTAGATTT  800

seq1  AACAGAACCCTGGCTTTTTTTCTATAAATACAAACAAGAAATAATAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAACCCTGGCTTTTTTTCTATAAATACAAACAAGAAATAATAATAA  850

seq1  AGTAAGTTAGTCAATGTCTATACTTCTGAAACTTTTTTGCATCTTTTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTTAGTCAATGTCTATACTTCTGAAACTTTTTTGCATCTTTTGTG  900

seq1  TCGCTCTTAAAGCTTTGAACCTAAAATTTAATGTTTATTTGGTTTGATCT  950
      ||||||||||||||||||||||||||||||||| |||||| | |||||||
seq2  TCGCTCTTAAAGCTTTGAACCTAAAATTTAATG-TTATTTTGGTTGATCT  949

seq1  CAAATTCTCTTTAAAA-TTTTTTATTTGATTGAATTTTTATTTTCTTAAA  999
      |||||||||||||||| |||||||||||| ||||||||  ||||||||||
seq2  CAAATTCTCTTTAAAATTTTTTTATTTGA-TGAATTTTATTTTTCTTAAA  998

seq1  AATTTAATACACGAATACTGTATTT-ACATCATTTCTAATACTCTTCCTC  1048
      || |||||||||| ||||||||||| |||||||||||||||||||| |||
seq2  AA-TTAATACACG-ATACTGTATTTAACATCATTTCTAATACTCTT-CTC  1045

seq1  TTCCTTCATCCAACTCCTCCTGTGCCCCTACCCACTCCAACTCTAATT-C  1097
      || |||||||||||| |||  ||| ||||||||||||| ||||| ||| |
seq2  TT-CTTCATCCAACT-CTCTGGTG-CCCTACCCACTCC-ACTCTTATTCC  1091

seq1  AAGAA-CTCTTCATATATAAA  1117
      ||||| ||||  ||||| |  
seq2  AAGAACCTCTCGATATAAA--  1110


seq1: chr15_64979978_64980859
seq2: B6Ng01-314K09.g_65_947 (reverse)

seq1  TCTCTTTCC-TCTCTGTGTCTTTCTTTCTCTAGCCGTGTCTCTTTGTATT  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCCTTCTCTGTGTCTTTCTTTCTCTAGCCGTGTCTCTTTGTATT  50

seq1  TCTCTCCAACTCTGTCTCTCTGTCTCTGTATCTCTCCATCTCTGTCTTTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAACTCTGTCTCTCTGTCTCTGTATCTCTCCATCTCTGTCTTTC  100

seq1  TCTCCCTTTCTCTCTCTGTGTCTGTCTGTCTATCTCTGTCTCGGTCTCGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTTCTCTCTCTGTGTCTGTCTGTCTATCTCTGTCTCGGTCTCGG  150

seq1  TCTTTCACTTTCTGTGTGTGTGTCTACATCTTTCTGTCTTTGTCTATCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCACTTTCTGTGTGTGTGTCTACATCTTTCTGTCTTTGTCTATCTC  200

seq1  ACTCTTTCTCCTTGCACATTAGGATGTAGCTCTCAGCTACTTCTCCAGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTCTCCTTGCACATTAGGATGTAGCTCTCAGCTACTTCTCCAGCA  250

seq1  CTATGTCTGCCTGCTGTCATAATTTCAGCCATAATCACAATGGTCTAAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCTGCCTGCTGTCATAATTTCAGCCATAATCACAATGGTCTAAGC  300

seq1  TTGTGAAACTAAGCCAATCGACATTTAAATGTTTTCTTTTAAGATTTGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAACTAAGCCAATCGACATTTAAATGTTTTCTTTTAAGATTTGCC  350

seq1  TTGGTCATATGTCTCTTTGTTAACCAAACAGACAAGAGATGTGATTCAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATATGTCTCTTTGTTAACCAAACAGACAAGAGATGTGATTCAAT  400

seq1  TATATTTTAGTTTATATTTTTAATAAAATAAATACTAGGGCTCCCAAGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAGTTTATATTTTTAATAAAATAAATACTAGGGCTCCCAAGAG  450

seq1  ATCCCCACTTTCATGCCTTAATACTAAGGCCCCAGAAATGTGTTGAAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCACTTTCATGCCTTAATACTAAGGCCCCAGAAATGTGTTGAAATT  500

seq1  ACTACCTCAATACACTACCAGAGTTTCTGTATTTTCCAGAGCTCATACAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTCAATACACTACCAGAGTTTCTGTATTTTCCAGAGCTCATACAA  550

seq1  CTCTCTAATTTTGGATTGCTCCATTCCCTGTGACCTCAGTTCTCCCATAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTAATTTTGGATTGCTCCATTCCCTGTGACCTCAGTTCTCCCATAT  600

seq1  AGCCAAAGAAAATTGTTCATCAGAATTCTAACCTTTTGCAGGAGATTCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAGAAAATTGTTCATCAGAATTCTAACCTTTTGCAGGAGATTCCA  650

seq1  TAGGAAACATGGACACAACAATCAAAGAAAATGCAAAATGATAATAACTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAACATGGACACAACAATCAAAGAAAATGCAAAATGATAATAACTG  700

seq1  AAAAAATCCAAGAAATCCAGGACACAATGAGAAGACCAAACCTAAGGATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCCAAGAAATCCAGGACACAATGAGAAGACCAAACCTAAGGATA  750

seq1  ATAGGAGTGAAGATTTTCAACTTAAAGGGCCAACAAATATCTTCAACAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGTGAAGATTTTCAACTTAAAGGGCCAACAAATATCTTCAACAAA  800

seq1  ATTATAGAAAAAATTATAGAAGAAAACTTCCCTGACCCATGAGAAAAAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGAAAAAATTATAGAAGAAAACTTCCCTGACCCATGAGAAAAAGA  850

seq1  TGCCCATGAACATACAAGATGCCTAGAGAATTC  882
      |||||||||||||||||||||||||||||||||
seq2  TGCCCATGAACATACAAGATGCCTAGAGAATTC  883


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