BAC Information

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BAC

Clone NameB6Ng01-318O09
Chromosome15 (Build37)
Map Location 85,057,523 - 85,219,208
singlet/doubletdoublet
Overlap geneFbln1, Atxn10
Upstream geneParvb, Parvg, LOC382988, 1810041L15Rik, Ldoc1l, Arhgap8, 3110043J09Rik, Phf21b, LOC100043084, 4930513L16Rik, Nup50, 5031439G07Rik, LOC628135, Upk3a, 3110048E14Rik, Smc1b, Ribc2
Downstream geneEG223745, Wnt7b, LOC100042240, Ppara, 2210021J22Rik, Pkdrej, AW124722, Gtse1, Trmu, Celsr1, BC021523, Cerk, LOC100042300, Tbc1d22a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318O09.bB6Ng01-318O09.g
ACCGA108671GA108672
length7541,065
definitionB6Ng01-318O09.b B6Ng01-318O09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,218,455 - 85,219,208)(85,057,523 - 85,058,592)
sequence
gaattcaaccacaaagaaggcagtgcactcccactgtgacaaagtgtcac
aaacatgacttcaattacgccagaagtcaagaaattcccaggctcgcacg
tcactgcccggagcacaccaggatctcgtttctgcctcgctgcacacctt
tccatgctgagggagggtccactctggagtccaagctcacgcaccaaacc
actgccaacagcactccagcatcaactactaaaacgtatttaaaatctga
ttcactgaggtatggtttacatgcaatacatacctttaagtatacaaaac
agagcctatcaaactacacagctatgactaacatttcaacaagttgcctg
tgtccctgtgaaattatgttgacccccgacttaagtcccagcgaacacgt
gacctgttctctgtcattatccacgagtctaacctactactaaatctcac
agaaatggcgtcctagtctagcttatccacctgctcaaatgctgctccag
ggttgtctttcatttggtcccagagctgcttctattctgctactgagcag
tgtcaaagagagaacaattctgactttaactcaaataaaggccaaagaaa
cagtccaagcagaggttttccagtgggatggaaaatggtaggatagaatt
actgccaagtagtttccgtagcctttaggagagaaggggtcaagaaagga
gaatgtgaccagggttaactgggggaggaggtgaaatggtgtgcgggagg
ggtg
gaattcagactttgtccaaggcaacggtgcagaccttcaggacccaggta
actcctctcccttccagtgcagaggagcagtgtgttattcttctctgggg
acgtgcatgtctgtgacttacccttcctgtgggtgtcacatttctggatt
ctaccaatcccagattaacaatattagagaaagggggctgagagatggct
cagtgggtaaagtacttggggtgcaaacctaaaagcctgagtttggcttc
ccaggacccacatgcaagcagcgtgcatctttaatccagggcttggggtg
tgtagacgggagtgcccctagagctcactgtcctgctagtctagctgaac
cagcagcgagcctcagctcagtgagaaacccggtctcaaaaaataagccg
agagctgtagaggaagacactggatgttgatgtgtgcatgcatgcgtgtg
acacctgtacacacacgtgtgtgtatgacacacactcaaagaaaatgttg
gagaaaagatcttgaatctgtaccgggtgtgtgcagacatttctcttgtc
actccttgaacaaaataacaactatctacatagcattgattagcattagg
tattaaaagtaacctagagatgatttaaggattacaggaggctatgcata
gacaatggacagacaccatggcattctatgtaagagacttgaatgtctat
cgattttttaaaaattattttattttattttattttgggggtgggggcgc
gtttcgagacagggtttctctgtatagccctggctgtccgggaactcagt
ttgtagaccaggctgggcctcgaactcagaaatccacccgcctctgcctc
ccggagtgctgggattaaagtgtgtgccaccacgcctggctatctgtcga
tttttaaaaaagaatttattttatttatatgtagggatgttttgtttgca
ttattgtctctgcacgcatgtgtgtggtgtctactgagccagaaacagtc
atggatcttatggaactattgtacagatggttgttgagtcacctatagtg
cctgggtccaaacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_85218455_85219208
seq2: B6Ng01-318O09.b_50_803 (reverse)

seq1  CACCCCTCCCGCACACCATTTCACCTCCTCCCCCAGTTAACCCTGGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTCCCGCACACCATTTCACCTCCTCCCCCAGTTAACCCTGGTCAC  50

seq1  ATTCTCCTTTCTTGACCCCTTCTCTCCTAAAGGCTACGGAAACTACTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTTTCTTGACCCCTTCTCTCCTAAAGGCTACGGAAACTACTTGG  100

seq1  CAGTAATTCTATCCTACCATTTTCCATCCCACTGGAAAACCTCTGCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATTCTATCCTACCATTTTCCATCCCACTGGAAAACCTCTGCTTGG  150

seq1  ACTGTTTCTTTGGCCTTTATTTGAGTTAAAGTCAGAATTGTTCTCTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTCTTTGGCCTTTATTTGAGTTAAAGTCAGAATTGTTCTCTCTTT  200

seq1  GACACTGCTCAGTAGCAGAATAGAAGCAGCTCTGGGACCAAATGAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGCTCAGTAGCAGAATAGAAGCAGCTCTGGGACCAAATGAAAGAC  250

seq1  AACCCTGGAGCAGCATTTGAGCAGGTGGATAAGCTAGACTAGGACGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGGAGCAGCATTTGAGCAGGTGGATAAGCTAGACTAGGACGCCAT  300

seq1  TTCTGTGAGATTTAGTAGTAGGTTAGACTCGTGGATAATGACAGAGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGAGATTTAGTAGTAGGTTAGACTCGTGGATAATGACAGAGAACA  350

seq1  GGTCACGTGTTCGCTGGGACTTAAGTCGGGGGTCAACATAATTTCACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACGTGTTCGCTGGGACTTAAGTCGGGGGTCAACATAATTTCACAGG  400

seq1  GACACAGGCAACTTGTTGAAATGTTAGTCATAGCTGTGTAGTTTGATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGCAACTTGTTGAAATGTTAGTCATAGCTGTGTAGTTTGATAGG  450

seq1  CTCTGTTTTGTATACTTAAAGGTATGTATTGCATGTAAACCATACCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTTGTATACTTAAAGGTATGTATTGCATGTAAACCATACCTCAG  500

seq1  TGAATCAGATTTTAAATACGTTTTAGTAGTTGATGCTGGAGTGCTGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAGATTTTAAATACGTTTTAGTAGTTGATGCTGGAGTGCTGTTGG  550

seq1  CAGTGGTTTGGTGCGTGAGCTTGGACTCCAGAGTGGACCCTCCCTCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTTTGGTGCGTGAGCTTGGACTCCAGAGTGGACCCTCCCTCAGCA  600

seq1  TGGAAAGGTGTGCAGCGAGGCAGAAACGAGATCCTGGTGTGCTCCGGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGGTGTGCAGCGAGGCAGAAACGAGATCCTGGTGTGCTCCGGGCA  650

seq1  GTGACGTGCGAGCCTGGGAATTTCTTGACTTCTGGCGTAATTGAAGTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGTGCGAGCCTGGGAATTTCTTGACTTCTGGCGTAATTGAAGTCAT  700

seq1  GTTTGTGACACTTTGTCACAGTGGGAGTGCACTGCCTTCTTTGTGGTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGACACTTTGTCACAGTGGGAGTGCACTGCCTTCTTTGTGGTTGA  750

seq1  ATTC  754
      ||||
seq2  ATTC  754

seq1: chr15_85057523_85058592
seq2: B6Ng01-318O09.g_68_1132

seq1  GAATTCAGACTTTGTCCAAGGCAACGGTGCAGACCTTCAGGACCCAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTTTGTCCAAGGCAACGGTGCAGACCTTCAGGACCCAGGTA  50

seq1  ACTCCTCTCCCTTCCAGTGCAGAGGAGCAGTGTGTTATTCTTCTCTGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCTCCCTTCCAGTGCAGAGGAGCAGTGTGTTATTCTTCTCTGGGG  100

seq1  ACGTGCATGTCTGTGACTTACCCTTCCTGTGGGTGTCACATTTCTGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCATGTCTGTGACTTACCCTTCCTGTGGGTGTCACATTTCTGGATT  150

seq1  CTACCAATCCCAGATTAACAATATTAGAGAAAGGGGGCTGAGAGATGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAATCCCAGATTAACAATATTAGAGAAAGGGGGCTGAGAGATGGCT  200

seq1  CAGTGGGTAAAGTACTTGGGGTGCAAACCTAAAAGCCTGAGTTTGGCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTAAAGTACTTGGGGTGCAAACCTAAAAGCCTGAGTTTGGCTTC  250

seq1  CCAGGACCCACATGCAAGCAGCGTGCATCTTTAATCCAGGGCTTGGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCCACATGCAAGCAGCGTGCATCTTTAATCCAGGGCTTGGGGTG  300

seq1  TGTAGACGGGAGTGCCCCTAGAGCTCACTGTCCTGCTAGTCTAGCTGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACGGGAGTGCCCCTAGAGCTCACTGTCCTGCTAGTCTAGCTGAAC  350

seq1  CAGCAGCGAGCCTCAGCTCAGTGAGAAACCCGGTCTCAAAAAATAAGCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCGAGCCTCAGCTCAGTGAGAAACCCGGTCTCAAAAAATAAGCCG  400

seq1  AGAGCTGTAGAGGAAGACACTGGATGTTGATGTGTGCATGCATGCGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGTAGAGGAAGACACTGGATGTTGATGTGTGCATGCATGCGTGTG  450

seq1  ACACCTGTACACACACGTGTGTGTATGACACACACTCAAAGAAAATGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGTACACACACGTGTGTGTATGACACACACTCAAAGAAAATGTTG  500

seq1  GAGAAAAGATCTTGAATCTGTACCGGGTGTGTGCAGACATTTCTCTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGATCTTGAATCTGTACCGGGTGTGTGCAGACATTTCTCTTGTC  550

seq1  ACTCCTTGAACAAAATAACAACTATCTACATAGCATTGATTAGCATTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTGAACAAAATAACAACTATCTACATAGCATTGATTAGCATTAGG  600

seq1  TATTAAAAGTAACCTAGAGATGATTTAAGGATTACAGGAGGCTATGCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAGTAACCTAGAGATGATTTAAGGATTACAGGAGGCTATGCATA  650

seq1  GACAATGGACAGACACCATGGCATTCTATGTAAGAGACTTGAATGTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGGACAGACACCATGGCATTCTATGTAAGAGACTTGAATGTCTAT  700

seq1  CGATTTTTTAAAAATTATTTTATTTTATTTTATTTTGGGGGTGGGGGCGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTTTTAAAAATTATTTTATTTTATTTTATTTTGGGGGTGGGGGCGC  750

seq1  GTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCGGGAACTCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCGGGAACTCAGT  800

seq1  TTGTAGACCAGGCT-GGCCTCGAACTCAGAAATCCACCCGCCTCTGCCT-  848
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  TTGTAGACCAGGCTGGGCCTCGAACTCAGAAATCCACCCGCCTCTGCCTC  850

seq1  CCGGAGTGCTGGGATTAAAGGTGTGTGCCACCACGCCTGGCTATCTGTCG  898
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCGGAGTGCTGGGATTAAA-GTGTGTGCCACCACGCCTGGCTATCTGTCG  899

seq1  ATTTTTAAAAAAGAATTTATTTTTATTTTATATGTAGGGATGTTTTGTTT  948
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  ATTTTTAAAAAAGAATTTATTTT--ATTTATATGTAGGGATGTTTTGTTT  947

seq1  GCATTTATGTCTCTGCACCGCATGTGTGTGGTGTCTACTGGAGCCAGAAA  998
      |||||  |||||||||| ||||||||||||||||||||| ||||||||||
seq2  GCATTATTGTCTCTGCA-CGCATGTGTGTGGTGTCTACT-GAGCCAGAAA  995

seq1  CAGTCATGGGACCTTATGGAACTATTGTTACAGATGGTTG-TGAGCCACC  1047
      ||||||| ||| ||||||||||||||| |||||||||||| |||| || |
seq2  CAGTCAT-GGATCTTATGGAACTATTG-TACAGATGGTTGTTGAGTCA-C  1042

seq1  CTATAGGTGCTGGGCCCAAACCT  1070
      ||||||   ||||| ||||||||
seq2  CTATAGTGCCTGGGTCCAAACCT  1065