BAC Information

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BAC

Clone NameB6Ng01-320D14
Chromosome15 (Build37)
Map Location 66,095,172 - 66,096,265
singlet/doubletsinglet
Overlap geneKcnq3
Upstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835
Downstream geneLrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320D14.bB6Ng01-320D14.g
ACCGA109648GA109649
length1,2031,112
definitionB6Ng01-320D14.b B6Ng01-320D14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctccgagccccattttttagtggggttatatgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
tgttgtcttattgatggtgtctttcgccttatagaagcttcgcaatttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgttgtt
ctattcaggaatttttcccctgtgcccatatcttcgaggcttttccccac
tttctcctcaataagtttcagtgtctctggtttaatgtggagttccttga
tccacttagacttgaccttagtacaaggagataggaatggatcaattcgc
attcttctatgataaccgccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttccactggatggttttagttctcttgtcaaagatcaagtga
ccgtaggtgtgtgggttcatttctgggtcttcagttctattccattggtc
tacctatatgtcgctgtactactactatgcagtgtttatcacaattgctc
tgtattacagctttaggtcaggcatggtgattccaccagcagttctttta
tcactgagaagggtttttgctatcctaggttttttgctattccagatgaa
tttgaaaattgccctttctaacttggtgaagaattgagttgaaattttga
tggggattgcattgactctgtagattgctttcggcaagataggcattttg
actatattaatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttctttcatgtctttcttcagagacttgcagttcttatcaacca
gatctttgacttccttaggtcgagtcacaccaaggtattttatattattt
gtgactattgtgaaggtgttgttcctaatttctttctcagcctgtttatc
ctttgtgtagagaaagccattgacttgttgagttaatttttatatccagc
cactgtactgaagctttttatcagattttaggagttttctggtggatttt
taggtcacaaattattaatatcatcctgccaagtgaaatttgcctttatt
tccaatttgatccccttgaaccctcttttgggtgtggcctcaaatatgcc
tct
gaattcaatgtctctggaaaaaaatcctattctgtgttggatcttcagtt
gtttacctatggcagagctccctgccagagttatgtgccatattgcagtg
tgtaattaccagcagaagtgctcagggggagaaatgttccttgctccaga
accattggtgagggaccatggtatctctgggaatgagggagagggctgtg
gatcagctggaaggccaaactcggctaagtgatggataatggaacagata
tgagggttggcagtgagctgacagacatgtctggcttgggaagtatgctt
ctccaacagttcatggtgaaaatgtaacagccgaggaagagaaagagact
gaactcaaccaatgtaggacaatatattcagacccagactttccaacaat
gtcagtcttgcttcagatctttcttgcatgcttaagacaaaagttcaggc
tatgattatggagttttgaggaagaggttttgtgtcacattcaacgtttc
ataagacagactgagacccaacctgggcagatgttaaggttcgacttaac
aacacctattattgccaccatgcattcttcataggtcagccttcagccac
tctgtgttagaagttaggcacagtcaaagtgcttgtccctgcctgctctc
ccacttcctagaccctccacaccctatactaagcatctattttcccatgc
agctttagactctccatgtccctgtcatacagttaaaacttaaccgcccc
cagtaacatcatttctggaatgagtggccaagagaggccagaacaaaggc
atcccaggtaactatttcattttcatgtacgttctgaagtctgctgccat
catcacaaagtcattgttttctgtatgcattttagagatgaagaatcagc
aactaagcctctgaagcaagatctgccttcccaactggaattaacacagc
tgctggaagatcgagttttgaactgagctctcatcagcctttcatcgtgt
ctcctgctccctcctctcaatcatggtgggttctttcagaacataagggt
tgttttcctcccactcaacacaggttgaaaccctcagcaggttcctcacc
cagaaaatgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66095172_66096265
seq2: B6Ng01-320D14.g_68_1179

seq1  GAATTCAATGTCTCTGGAAAAAAATCCTATTCTGTGTTGGATCTTCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTCTCTGGAAAAAAATCCTATTCTGTGTTGGATCTTCAGTT  50

seq1  GTTTACCTATGGCAGAGCTCCCTGCCAGAGTTATGTGCCATATTGCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCTATGGCAGAGCTCCCTGCCAGAGTTATGTGCCATATTGCAGTG  100

seq1  TGTAATTACCAGCAGAAGTGCTCAGGGGGAGAAATGTTCCTTGCTCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTACCAGCAGAAGTGCTCAGGGGGAGAAATGTTCCTTGCTCCAGA  150

seq1  ACCATTGGTGAGGGACCATGGTATCTCTGGGAATGAGGGAGAGGGCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGGTGAGGGACCATGGTATCTCTGGGAATGAGGGAGAGGGCTGTG  200

seq1  GATCAGCTGGAAGGCCAAACTCGGCTAAGTGATGGATAATGGAACAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCTGGAAGGCCAAACTCGGCTAAGTGATGGATAATGGAACAGATA  250

seq1  TGAGGGTTGGCAGTGAGCTGACAGACATGTCTGGCTTGGGAAGTATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTTGGCAGTGAGCTGACAGACATGTCTGGCTTGGGAAGTATGCTT  300

seq1  CTCCAACAGTTCATGGTGAAAATGTAACAGCCGAGGAAGAGAAAGAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACAGTTCATGGTGAAAATGTAACAGCCGAGGAAGAGAAAGAGACT  350

seq1  GAACTCAACCAATGTAGGACAATATATTCAGACCCAGACTTTCCAACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAACCAATGTAGGACAATATATTCAGACCCAGACTTTCCAACAAT  400

seq1  GTCAGTCTTGCTTCAGATCTTTCTTGCATGCTTAAGACAAAAGTTCAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCTTGCTTCAGATCTTTCTTGCATGCTTAAGACAAAAGTTCAGGC  450

seq1  TATGATTATGGAGTTTTGAGGAAGAGGTTTTGTGTCACATTCAACGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTATGGAGTTTTGAGGAAGAGGTTTTGTGTCACATTCAACGTTTC  500

seq1  ATAAGACAGACTGAGACCCAACCTGGGCAGATGTTAAGGTTCGACTTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAGACTGAGACCCAACCTGGGCAGATGTTAAGGTTCGACTTAAC  550

seq1  AACACCTATTATTGCCACCATGCATTCTTCATAGGTCAGCCTTCAGCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTATTATTGCCACCATGCATTCTTCATAGGTCAGCCTTCAGCCAC  600

seq1  TCTGTGTTAGAAGTTAGGCACAGTCAAAGTGCTTGTCCCTGCCTGCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTAGAAGTTAGGCACAGTCAAAGTGCTTGTCCCTGCCTGCTCTC  650

seq1  CCACTTCCTAGACCCTCCACACCCTATACTAAGCATCTATTTTCCCATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCCTAGACCCTCCACACCCTATACTAAGCATCTATTTTCCCATGC  700

seq1  AGCTTTAGACTCTCCATGTCCCTGTCATACAGTTAAAACTTAACCGCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAGACTCTCCATGTCCCTGTCATACAGTTAAAACTTAACCGCCCC  750

seq1  CAGTAACATCATTTCTGGAATGAGTGGCCAAGAGAGGCCAGAACAAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACATCATTTCTGGAATGAGTGGCCAAGAGAGGCCAGAACAAAGGC  800

seq1  ATCCCAGGTAACTA-TTCATTTTCATGTACGTTCTGAAGTCTGCTGCCAT  849
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATCCCAGGTAACTATTTCATTTTCATGTACGTTCTGAAGTCTGCTGCCAT  850

seq1  CATCAC-AAGTCATTG-TTTCTGTATGCATTTTAGAGATGAAGAATCAGC  897
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  CATCACAAAGTCATTGTTTTCTGTATGCATTTTAGAGATGAAGAATCAGC  900

seq1  AACTAAG-CTCTGAAGCAAGATCTGCCTTCCCAACTGG-ATTAACACAGC  945
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  AACTAAGCCTCTGAAGCAAGATCTGCCTTCCCAACTGGAATTAACACAGC  950

seq1  TGCTGAAAGATCGAGTTTTGAACTGAGCTCTCATCAGCCTTTCATCGTGT  995
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAAGATCGAGTTTTGAACTGAGCTCTCATCAGCCTTTCATCGTGT  1000

seq1  CTCCTGCTTCCT-CTCTC-ATCAT-GTGGGTTCTTTCAG-ACATA---GG  1038
      |||||||| ||| ||||| ||||| |||||||||||||| |||||   | 
seq2  CTCCTGCTCCCTCCTCTCAATCATGGTGGGTTCTTTCAGAACATAAGGGT  1050

seq1  TGTTT--CTTCCACTCAACACAGGTTGAAACCC-CAGCAGG-TCCTCA-C  1083
      |||||  || ||||||||||||||||||||||| ||||||| |||||| |
seq2  TGTTTTCCTCCCACTCAACACAGGTTGAAACCCTCAGCAGGTTCCTCACC  1100

seq1  CAG-AAATGAAA  1094
      ||| ||||||||
seq2  CAGAAAATGAAA  1112