BAC Information

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BAC

Clone NameB6Ng01-321B08
Chromosome15 (Build37)
Map Location 41,595,438 - 41,596,571
singlet/doubletsinglet
Overlap genenone
Upstream geneZfpm2
Downstream geneOxr1, Abra, EG432946, LOC432947, LOC100039268, LOC100039197, Angpt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321B08.bB6Ng01-321B08.g
ACCGA110286GA110287
length1,1161,221
definitionB6Ng01-321B08.b B6Ng01-321B08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatatgagtcctgaattacaatcatgtcaaaaataaggaatgca
agtgttaataattctatacacttaaatatttattgtgggtatttaacagt
gagagatctagcaaatgaaaagttgtagttaataataaatatacctcctt
ttatttcctcttttttcatctaccatcaagttgcttcctcttctgcatta
tctaatgatctctatattccacccacatgcacgtcagtcttatagtgcct
atcaaggataaaaacacaacacatctctcctgttgcccataattaaaaca
acagcacaatgccctccaacaacaaactaacagtggagccaactcaagac
ttggttgcaagactctgtgagactcatagagtagtttatttctgtgcctg
gtttcttagatgagagctggaaatggaaagatgggggtattaggcttcaa
aaagtgaggaggtttctttagttccatgattctatcagttagtatgtttt
aacaattattaatttctgaaataacactggggccagggagagtcacactt
cctcaaaactgtagatgaagtaatgacatctaagaaattagtgctccaac
tatcatgaaatttaccttcccatggaaagaggagacaaggtaatggaatg
agtttttttagggctcatccataaattcctagacagatgcaagaagttct
ctgttttaagaataagactgctatttatagaagcaccacgcagaatttca
gtcacattgactattttgtttcacactgtcatgatctccatccacagtta
tatcagaccttacaattaatgaataccacctgtcttagtcaggatttcta
ttcctgcacaaacatcataaccaagaagcagttggggaggaaagggttta
ttcagcttacaattccatactgctatttatcaccaaggaagtcaggactg
gaactcaaacaggtcaggaagcaggagctgatgcagaggccatggagtat
gttctttactggcctgcttcccctggctgctcagctgctctctatagacc
agataacagccaatatggtcccacccacagggccttccccttgatcatat
gagaaatgcttacagt

gaattcttggttctcccagcaccaagtctgcctgcatattgccatgcttc
ccaccatgatgataatggactgaacctctgaaacttgtaagcaaacctaa
attaagtgttttccattataagagttgccttggtcatggtgtctcttcgt
ggcaatgaagccctaactaaggcagaaagaggttggtactaggggctgag
gtacctgtggtagaagtgaccatttttttgtttggaggaatattgatttg
gggactttggaaagcaattgaatgctttgcgtgggacctaataggccata
ctggtagaagcaggaaagacagtggtgctgggggtggcttgaattgtgtg
gacctagctctagaagttttagaaaagaagaattttagtatgtgccctag
agactgttcttgtgatattttggtgaagaatgtggcagctttgtgctctt
gtctgaagaatctatctgaggctaaagggaagagattcaaattaattgca
ttgacaaaggaaatctcaaaacaagcaggcttagactctatctgtggttc
actcttatgaggagcattttgatcaagcatagcaaatgaaaaatacaaat
tacatggctcaaagattaaagggacaccaggaagtgaaatagagctaaac
cctattttcaaggatactaaatggaattaagggaggggtaacctcagggc
aagatcccagccagataaacttattgtttatgtatttgcagttgaacaag
gaataatcatatcatgttagggaatactagatctggttattgttttcatt
tgagcattaggagatatgattatgtgtcaaattgacaagggatggattgt
gatggttatacttgattatcaaattgactatatctggaaagagctacaat
ccagaacttgtaaagatcttgtgaaaaggtgaagaaagactttggtttag
tactcatcattattcctagcattcagagacacaggaatgcagatctctaa
attcaggattagtctacagagcagatccaggatagacaccttaggcagtg
aaggagttggaaacgaaagttggtcataatataattagattaatttaata
taatttataattatattgggggcatatcccatgcttcatcatgataatga
ccgactctgaacgtgacgagccgaataaattggcagtttataagaatacc
ttacttcctggtgcgtcgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_41595438_41596571
seq2: B6Ng01-321B08.b_47_1162 (reverse)

seq1  ACTGTAAGGCATTTTCTCAATTAATGATCAAGGGGGAAAGGCCCCTTGTG  50
      ||||||| ||| |||||||    ||||||||||||  |||||||  ||||
seq2  ACTGTAA-GCA-TTTCTCA---TATGATCAAGGGG--AAGGCCC--TGTG  41

seq1  GGTGGGACCATATTTGGGCTGGTAATCTTGGTTCTATAAGAGAGCAGGCT  100
      ||||||||||||||  |||| || ||||  | ||||| |||||||| |||
seq2  GGTGGGACCATATT--GGCT-GTTATCT--GGTCTAT-AGAGAGCA-GCT  84

seq1  GAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATAACTCCATGGCCTCT  150
      |||| |||||||||||||| ||||||||||||||| ||||||||||||||
seq2  GAGC-AGCCAGGGGAAGCAGGCCAGTAAAGAACAT-ACTCCATGGCCTCT  132

seq1  GCATCAGCTCCTGCTTCCTGACCTGTTTGAGTTCCAGTCCTGACTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGCTCCTGCTTCCTGACCTGTTTGAGTTCCAGTCCTGACTTCCTT  182

seq1  GGTGATAAATAGCAGTATGGAATTGTAAGCTGAATAAACCCTTTCCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAAATAGCAGTATGGAATTGTAAGCTGAATAAACCCTTTCCTCCC  232

seq1  CAACTGCTTCTTGGTTATGATGTTTGTGCAGGAATAGAAATCCTGACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCTTCTTGGTTATGATGTTTGTGCAGGAATAGAAATCCTGACTAA  282

seq1  GACAGGTGGTATTCATTAATTGTAAGGTCTGATATAACTGTGGATGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTGGTATTCATTAATTGTAAGGTCTGATATAACTGTGGATGGAGA  332

seq1  TCATGACAGTGTGAAACAAAATAGTCAATGTGACTGAAATTCTGCGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACAGTGTGAAACAAAATAGTCAATGTGACTGAAATTCTGCGTGGT  382

seq1  GCTTCTATAAATAGCAGTCTTATTCTTAAAACAGAGAACTTCTTGCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTATAAATAGCAGTCTTATTCTTAAAACAGAGAACTTCTTGCATCT  432

seq1  GTCTAGGAATTTATGGATGAGCCCTAAAAAAACTCATTCCATTACCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGAATTTATGGATGAGCCCTAAAAAAACTCATTCCATTACCTTGT  482

seq1  CTCCTCTTTCCATGGGAAGGTAAATTTCATGATAGTTGGAGCACTAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTTCCATGGGAAGGTAAATTTCATGATAGTTGGAGCACTAATTT  532

seq1  CTTAGATGTCATTACTTCATCTACAGTTTTGAGGAAGTGTGACTCTCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATGTCATTACTTCATCTACAGTTTTGAGGAAGTGTGACTCTCCCT  582

seq1  GGCCCCAGTGTTATTTCAGAAATTAATAATTGTTAAAACATACTAACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCAGTGTTATTTCAGAAATTAATAATTGTTAAAACATACTAACTGA  632

seq1  TAGAATCATGGAACTAAAGAAACCTCCTCACTTTTTGAAGCCTAATACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCATGGAACTAAAGAAACCTCCTCACTTTTTGAAGCCTAATACCC  682

seq1  CCATCTTTCCATTTCCAGCTCTCATCTAAGAAACCAGGCACAGAAATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTCCATTTCCAGCTCTCATCTAAGAAACCAGGCACAGAAATAAA  732

seq1  CTACTCTATGAGTCTCACAGAGTCTTGCAACCAAGTCTTGAGTTGGCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTATGAGTCTCACAGAGTCTTGCAACCAAGTCTTGAGTTGGCTCC  782

seq1  ACTGTTAGTTTGTTGTTGGAGGGCATTGTGCTGTTGTTTTAATTATGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAGTTTGTTGTTGGAGGGCATTGTGCTGTTGTTTTAATTATGGGC  832

seq1  AACAGGAGAGATGTGTTGTGTTTTTATCCTTGATAGGCACTATAAGACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAGAGATGTGTTGTGTTTTTATCCTTGATAGGCACTATAAGACTG  882

seq1  ACGTGCATGTGGGTGGAATATAGAGATCATTAGATAATGCAGAAGAGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCATGTGGGTGGAATATAGAGATCATTAGATAATGCAGAAGAGGAA  932

seq1  GCAACTTGATGGTAGATGAAAAAAGAGGAAATAAAAGGAGGTATATTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTGATGGTAGATGAAAAAAGAGGAAATAAAAGGAGGTATATTTAT  982

seq1  TATTAACTACAACTTTTCATTTGCTAGATCTCTCACTGTTAAATACCCAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACTACAACTTTTCATTTGCTAGATCTCTCACTGTTAAATACCCAC  1032

seq1  AATAAATATTTAAGTGTATAGAATTATTAACACTTGCATTCCTTATTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATATTTAAGTGTATAGAATTATTAACACTTGCATTCCTTATTTTT  1082

seq1  GACATGATTGTAATTCAGGACTCATATTGAATTC  1134
      ||||||||||||||||||||||||||||||||||
seq2  GACATGATTGTAATTCAGGACTCATATTGAATTC  1116


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