BAC Information

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BAC

Clone NameB6Ng01-321B17
Chromosome15 (Build37)
Map Location 25,873,746 - 26,003,816
singlet/doubletdoublet
Overlap gene1810015C04Rik, Zfp622
Upstream geneLOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1
Downstream geneAK162044, Fbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321B17.bB6Ng01-321B17.g
ACCGA110304GA110305
length1,1481,003
definitionB6Ng01-321B17.b B6Ng01-321B17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,873,746 - 25,874,890)(26,002,303 - 26,003,816)
sequence
gaattcttagcccacgtgctgaagctcaggtgtcttcacagggaaaacgt
gaccattttggactcctgggcaaggacaagtctgcttgaaaaggcccgag
actctagagttgtgaactcagtttgtgtttccagatctttctgttgttct
cttctctggagtggtgaggctgttatgccacttctctgaaatgcttgggt
ttcagggtcttctgtcccttctccaggttttgatagacttgcttgtctgt
aatgtgttatcttggggatgtgacccatgtctaaacatgaaacccactta
catttatgcatttatttacatttaattttacatcctaaaattaagtttcc
tagactgtttttagtgtgcttacgttgtgtctgtgacttgcagacttggt
ggttttcggattaggactgtataccctggatttgtttctgggtttttgaa
acgttgttgcgtttagaaaaaccaaggctcttttaaatacacaatgggaa
aattagtatgagaatgctattagcaattgcattcaatggaaggttacaag
aagttgatttaaatgtcctcttgagtttccattgttctaacagttcagac
tggcaggatttggggtacaatttttatgtttctcatcaggcttatccact
gagaatgcatctctttaatatctaagacccaatatggaaagttgaccaag
tgcctcaacccagcgttgtgtgctctgcccttcggtggaagtagattcct
gcaagcaaacatatttaacctttggtatccttgagtgtcttggatccacc
tttcatttggaaatcagtgcagacgtgggtaagggacactcacgtaaaga
gaaggggttctgagctccctgcagataagtgggagggccatggaaagaac
cccttggcctgggtagcagtggtagtactgggaaatgttcaacagtcaac
actctgggggagggagccctccatcctttagcatttgctgattcttgtgg
gtaaatgcttgcactctccactggttactgagaagtaacggataatcctc
acagtgcttctctgtggagcctagcttcagttaccacaaatgactgtaag
ccagtcagaagtcagcaggttgggatttaaaaaggcgacaatctctct

gaattcattccaacgatcaacagtacctttccaacattatccagtacttc
ttcagccttagcataaaaatatatagttttgtctatttatttggatttcc
attgccctgtgaaggttgcagtgttacatttaacattaaatcagtgtgtt
tgctcttctcttgttaatgtgcttctgacatataggtcctccagtgtgag
tctttcagagagagacagatactagtgttctcctgtgtagcctccaactg
catgtacagtcactgaattcctcactagcacaaactaataaaattctaaa
ataaaaatcggctacttttccttgagaatgtccttaatgaaactgtaaaa
aattaattttattaaatctcatttactgcgtacacatccttttaatattc
aatgcaacaaaatgtgaaggctgcataaattaattttgcagtgtgctgaa
gtatgaaggttgtcttgagggcaagcacggtgcagttctttgaattaaat
gctgaaataaaaatgggcacaagagtaaacatgtataatcccagcagctg
ggacactgaggcagaaggaccattggcctaaacccagcttggtctacacc
atgaaatcctgtgtcaagaaagcaaaacagtaatcaagaaggaaaacttc
ttcttccctctccccttcttcctctcctcctccttcttttcatttatgaa
tatcattttaaaagaactattgaattattcaatcttagatgtttgggaaa
tatttttccaaaatatgaatgagaattatcagttcaagggagactgacag
gaattgtttcctctaataacaatccatcttgcaaggaaaaattagaattg
aaaagatgttcccactgtcccaacattcatagacttttctaaagaaatgg
gggttttctttttactttgtgtgatgaaatgtgacaacattgggagatgt
ctgtcaaattgggagatattttttcaaaatagtcgatgtgtgctgatata
aaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25873746_25874890
seq2: B6Ng01-321B17.b_47_1194

seq1  GAATTCTTAGCCCACGTGCTGAAGCTCAGGTGTCTTCACAGGGAAAACGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCCCACGTGCTGAAGCTCAGGTGTCTTCACAGGGAAAACGT  50

seq1  GACCATTTTGGACTCCTGGGCAAGGACAAGTCTGCTTGAAAAGGCCCGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTTTGGACTCCTGGGCAAGGACAAGTCTGCTTGAAAAGGCCCGAG  100

seq1  ACTCTAGAGTTGTGAACTCAGTTTGTGTTTCCAGATCTTTCTGTTGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGAGTTGTGAACTCAGTTTGTGTTTCCAGATCTTTCTGTTGTTCT  150

seq1  CTTCTCTGGAGTGGTGAGGCTGTTATGCCACTTCTCTGAAATGCTTGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGGAGTGGTGAGGCTGTTATGCCACTTCTCTGAAATGCTTGGGT  200

seq1  TTCAGGGTCTTCTGTCCCTTCTCCAGGTTTTGATAGACTTGCTTGTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGTCTTCTGTCCCTTCTCCAGGTTTTGATAGACTTGCTTGTCTGT  250

seq1  AATGTGTTATCTTGGGGATGTGACCCATGTCTAAACATGAAACCCACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTATCTTGGGGATGTGACCCATGTCTAAACATGAAACCCACTTA  300

seq1  CATTTATGCATTTATTTACATTTAATTTTACATCCTAAAATTAAGTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGCATTTATTTACATTTAATTTTACATCCTAAAATTAAGTTTCC  350

seq1  TAGACTGTTTTTAGTGTGCTTACGTTGTGTCTGTGACTTGCAGACTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGTTTTTAGTGTGCTTACGTTGTGTCTGTGACTTGCAGACTTGGT  400

seq1  GGTTTTCGGATTAGGACTGTATACCCTGGATTTGTTTCTGGGTTTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCGGATTAGGACTGTATACCCTGGATTTGTTTCTGGGTTTTTGAA  450

seq1  ACGTTGTTGCGTTTAGAAAAACCAAGGCTCTTTTAAATACACAATGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGTTGCGTTTAGAAAAACCAAGGCTCTTTTAAATACACAATGGGAA  500

seq1  AATTAGTATGAGAATGCTATTAGCAATTGCATTCAATGGAAGGTTACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTATGAGAATGCTATTAGCAATTGCATTCAATGGAAGGTTACAAG  550

seq1  AAGTTGATTTAAATGTCCTCTTGAGTTTCCATTGTTCTAACAGTTCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGATTTAAATGTCCTCTTGAGTTTCCATTGTTCTAACAGTTCAGAC  600

seq1  TGGCAGGATTTGGGGTACAATTTTTATGTTTCTCATCAGGCTTATCCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGATTTGGGGTACAATTTTTATGTTTCTCATCAGGCTTATCCACT  650

seq1  GAGAATGCATCTCTTTAATATCTAAGACCCAATATGGAAAGTTGACCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGCATCTCTTTAATATCTAAGACCCAATATGGAAAGTTGACCAAG  700

seq1  TGCCTCAACCCAGCGTTGTGTGCTCTGCCCTTCGGTGGAAGTAGATTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAACCCAGCGTTGTGTGCTCTGCCCTTCGGTGGAAGTAGATTCCT  750

seq1  GCAAGCAAACATATTTAACCTTTGGTATCCTTGAGTGTCTTGGATCCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAAACATATTTAACCTTTGGTATCCTTGAGTGTCTTGGATCCACC  800

seq1  TTTCATTTGGAAATCAGTGCAGACGTGGGTAAGGGACACTCACGTAAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTGGAAATCAGTGCAGACGTGGGTAAGGGACACTCACGTAAAGA  850

seq1  GAAGGGGTTCTGAGCTCCCTGCAGATAAGTGGGAGGGCCATGGAAAGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGTTCTGAGCTCCCTGCAGATAAGTGGGAGGGCCATGGAAAGAAC  900

seq1  CCCTTGGCCTGGGTAGCAGTGGTAGTACTGGGAAATGTTCAACAGTC-AC  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCCTTGGCCTGGGTAGCAGTGGTAGTACTGGGAAATGTTCAACAGTCAAC  950

seq1  ACTCTGGGGGAGGGAGCCC-CCATCCTTTAGCATTTGCTGATTCTTGTGG  998
      ||||||||||||||||||| |||||||||||||||||||||||||||| |
seq2  ACTCTGGGGGAGGGAGCCCTCCATCCTTTAGCATTTGCTGATTCTTGT-G  999

seq1  GGTAAATGCTTGCACTCTCACCTGGTTACTGAGAAGTAACGGATAATCCT  1048
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  GGTAAATGCTTGCACTCTCCACTGGTTACTGAGAAGTAACGGATAATCCT  1049

seq1  CACAGTGGCTCTCTGT-GAGCCTAGCTTCAGT--ACACAAATGACTGTAG  1095
      |||||||  ||||||| |||||||||||||||   |||||||||||||| 
seq2  CACAGTGCTTCTCTGTGGAGCCTAGCTTCAGTTACCACAAATGACTGTAA  1099

seq1  GCCAAGGCCAG-AGTCAGCAG--TTGGTTTTAACAAGGCGACATCTTCTC  1142
      ||||  | ||| |||||||||  | || ||||| |||||||||   ||||
seq2  GCCA--GTCAGAAGTCAGCAGGTTGGGATTTAAAAAGGCGACA--ATCTC  1145

seq1  TCT  1145
      |||
seq2  TCT  1148


seq1: chr15_26002303_26003816
seq2: B6Ng01-321B17.g_67_1008 (reverse)

seq1  CAATGTTGTCACATTTCATCCTACAATGGAAAAAGGAAATACCATTTGTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  ACAATGATCACCCATACTTTAAAAAAAATATTTATGCACTTTATATCCCA  100
                                                        
seq2  --------------------------------------------------  0

seq1  ATATCAGCCTCCTCTTCCCAGTCCTCCTTCATACAAATCTTCTCCTCCTT  150
                                                        
seq2  --------------------------------------------------  0

seq1  CTCACACCCCCTTCTCCTCTGAGAGGAGGAGGACCCCCGGTTGTCCTCCC  200
                                                        
seq2  --------------------------------------------------  0

seq1  CCAACCCCAGCTAGGGATCACCCCCCCCCTTTTTTTTTTGAAAAGTCTAT  250
                                                        
seq2  --------------------------------------------------  0

seq1  GAATGTTGGGATGGTAGAAACATTTTTAAAAATTCTAATTCAAATTGGAT  300
                                                        
seq2  --------------------------------------------------  0

seq1  GTGCATGTTTAGCATTTAATTTGTACTTGTTTTAGATGCCTGTGGGGTTC  350
                                                        
seq2  --------------------------------------------------  0

seq1  CTTATTTGGCTTCAGGCTAATCCTTGATAAATGATGGTTCCCGCAAAGGT  400
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTTGCAATGTAGAATCAGAAACCCTATTAGCAAGTGCTCTGCTCACTC  450
                                                        
seq2  --------------------------------------------------  0

seq1  TTCACTATGTCAGCATCTATTGCAGCAACTCACATTTTCAAAGGTTCTTT  500
                                                        
seq2  --------------------------------------------------  0

seq1  GACTTACATATTATTTTATTATCAGCACACATCGACTATTTGAAAAATAT  550
                                                        
seq2  --------------------------------------------------  0

seq1  CTCCCAATTTGACAGACATCTCCAATGTTGTCACATTTCATCACACAAAG  600
                            ||||||||||||||||||||||||||||
seq2  ----------------------CAATGTTGTCACATTTCATCACACAAAG  28

seq1  TAAAAAGAAAACCCCCATTTCTTTAGAAAAGTCTATGAATGTTGGGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAAACCCCCATTTCTTTAGAAAAGTCTATGAATGTTGGGACAG  78

seq1  TGGGAACATCTTTTCAATTCTAATTTTTCCTTGCAAGATGGATTGTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACATCTTTTCAATTCTAATTTTTCCTTGCAAGATGGATTGTTATT  128

seq1  AGAGGAAACAATTCCTGTCAGTCTCCCTTGAACTGATAATTCTCATTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAACAATTCCTGTCAGTCTCCCTTGAACTGATAATTCTCATTCAT  178

seq1  ATTTTGGAAAAATATTTCCCAAACATCTAAGATTGAATAATTCAATAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAAAAATATTTCCCAAACATCTAAGATTGAATAATTCAATAGTT  228

seq1  CTTTTAAAATGATATTCATAAATGAAAAGAAGGAGGAGGAGAGGAAGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAATGATATTCATAAATGAAAAGAAGGAGGAGGAGAGGAAGAAG  278

seq1  GGGAGAGGGAAGAAGAAGTTTTCCTTCTTGATTACTGTTTTGCTTTCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGGAAGAAGAAGTTTTCCTTCTTGATTACTGTTTTGCTTTCTTG  328

seq1  ACACAGGATTTCATGGTGTAGACCAAGCTGGGTTTAGGCCAATGGTCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGATTTCATGGTGTAGACCAAGCTGGGTTTAGGCCAATGGTCCTT  378

seq1  CTGCCTCAGTGTCCCAGCTGCTGGGATTATACATGTTTACTCTTGTGCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCAGTGTCCCAGCTGCTGGGATTATACATGTTTACTCTTGTGCCC  428

seq1  ATTTTTATTTCAGCATTTAATTCAAAGAACTGCACCGTGCTTGCCCTCAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTCAGCATTTAATTCAAAGAACTGCACCGTGCTTGCCCTCAA  478

seq1  GACAACCTTCATACTTCAGCACACTGCAAAATTAATTTATGCAGCCTTCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCTTCATACTTCAGCACACTGCAAAATTAATTTATGCAGCCTTCA  528

seq1  CATTTTGTTGCATTGAATATTAAAAGGATGTGTACGCAGTAAATGAGATT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTTGCATTGAATATTAAAAGGATGTGTACGCAGTAAATGAGATT  578

seq1  TAATAAAATTAATTTTTTACAGTTTCATTAAGGACATTCTCAAGGAAAAG  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAATTAATTTTTTACAGTTTCATTAAGGACATTCTCAAGGAAAAG  628

seq1  TAGCCGATTTTTATTTTAGAATTTTATTAGTTTGTGCTAGTGAGGAATTC  1250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCGATTTTTATTTTAGAATTTTATTAGTTTGTGCTAGTGAGGAATTC  678

seq1  AGTGACTGTACATGCAGTTGGAGGCTACACAGGAGAACACTAGTATCTGT  1300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGTACATGCAGTTGGAGGCTACACAGGAGAACACTAGTATCTGT  728

seq1  CTCTCTCTGAAAGACTCACACTGGAGGACCTATATGTCAGAAGCACATTA  1350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTGAAAGACTCACACTGGAGGACCTATATGTCAGAAGCACATTA  778

seq1  ACAAGAGAAGAGCAAACACACTGATTTAATGTTAAATGTAACACTGCAAC  1400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGAAGAGCAAACACACTGATTTAATGTTAAATGTAACACTGCAAC  828

seq1  CTTCACAGGGCAATGGAAATCCAAATAAATAGACAAAACTATATATTTTT  1450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGGGCAATGGAAATCCAAATAAATAGACAAAACTATATATTTTT  878

seq1  ATGCTAAGGCTGAAGAAGTACTGGATAATGTTGGAAAGGTACTGTTGATC  1500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAGGCTGAAGAAGTACTGGATAATGTTGGAAAGGTACTGTTGATC  928

seq1  GTTGGAATGAATTC  1514
      ||||||||||||||
seq2  GTTGGAATGAATTC  942


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