BAC Information

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BAC

Clone NameB6Ng01-321G09
Chromosome15 (Build37)
Map Location 38,304,933 - 38,463,247
singlet/doubletdoublet
Overlap geneAzin1
Upstream geneNcald, LOC667498, 4930447A16Rik, LOC100041313, LOC667534, Rrm2b, LOC100041478, Edd1, Odf1, LOC382986, LOC667563, Klf10
Downstream geneSiah1-ps2, Atp6v1c1, Baalc, TOB3L, Fzd6, LOC636952, Cthrc1, Slc25a32, Wdsof1, LOC671215, Rims2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321G09.bB6Ng01-321G09.g
ACCGA110518GA110519
length1,2061,138
definitionB6Ng01-321G09.b B6Ng01-321G09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,462,035 - 38,463,247)(38,304,933 - 38,306,071)
sequence
gaattcatatccaggcatggtggcgcacgcctttaatcccagcactcagg
acgcagaggcaggaggatctctgagttcaaggccagtctggtgtacagag
tgagttccaggacagccaaggatacacagagaaaccctgtctcaaaaatc
aaaacaaaacaaagtccaagaggaagaacacacattgacctgcatatggt
ggtcctgcctggaatggtgagggacagaattactgaggacttcagtgacg
tgccttttaaggataacagatacaaaagattgctggtgtttagctgtaac
ttagagactaactctgaagaagagatttaatattaaccgtgtgcgctgcc
ctctctcttatactcttgatagtaagacaccagctgatcaggcatggaca
gattggggtggaaagctgaacaggcctggccgttggcttaaccgtttatg
atggagcctggacaaggccacccccgactcccatttccaaagcacagggg
aaacactgaagcgattccttttccctggtttccttcaagacggcagcaag
ggaagcagccagctttcggttaaaatgaggagcgcgggacagggatcagg
gtgggacagtttcctcaccttgaattcctgttccagcaggcacagaagaa
agatgtgagaaaggagcgtgcagaagcaccgaatgctgtcatcagtgaag
agagaaggtggcttcatgggggctgcagggaatcccggaccttaaggacc
tgtggtgtcaagttgagcaccatggaaacagacctcctgcctgcatgtgt
gtcagatcctctggaactggatctgctgccacctgggtgctgggaattaa
accctggtcctctggaagagcagtctgtgctttgaagtgctgaaccatct
ttccagcccctgaaaatagcatttaaggaatgataagtgtgagacagtag
aaggagagaactgactcctgcaagatgtcccttgtcgttcctgctaaagg
gacaccgtcagacactaccctaaagcagagcaaagagaaaacgatcagac
aggagtgtgacagcaaagggaccctcgctttgggaccatttaaaagcttt
tgccactgtgatggtttgtacatgcctgttcggcatgcactgctgagctg
accttgattgaaactgtgtcactatgtctctgtgtgtgctttaataaccc
ttcatc
gaattccccatccctctggaaaggcaatcttttctcctcacccaacactc
cttccacagtgacttgccctagctttacacaaagtgtagagtcacacatc
ttattaggcctctcctcttacttgaaacaatcatgggctgaggagatact
cagagaatacagaacttgttttacaagcaggaggttccgcgttgggatcc
ctatcagcctcataaaaggctggctctgctggatatctatctataaccta
tctattcagggtctatctattcagggaccgagtgatccactgaggatcac
cgcaagcttgctcacaacttccgcaaacctgcgcaccagagctcctgtgc
atgcgcacacaaatcacattgcctgctactcctttgacacgttctcgttt
aatcttcatagactgtgacaggaaaattgacaccctcaggtcacagagga
agaaatgaacactgagcgaggctctgaaactgctcaagccgagcaactga
cacgatggcctcaggagccacccctaggtgtctgattccaaggtggggag
ctgagggctctcgaacagagagtcctgtaggttgtagctacatgtgtcgg
ttgtgccagccacacagccatctatcctggaaggaccaagggcaaaaccc
attagccttacctgggaactgtccccagaacctgacactttaccccagcc
ctcagctaagccacctttacttcctgcttgagctaactatgactggacac
accctgtgtggtcattctccagcagcgaatagacccctaaaatgtccagt
ttgatcaggtctctcctgtggtcagagccctccaatagttcctgcttggc
tgagtgaccaagccaaggtacagcagcctagaaggtaccccgccactgcc
cctcactctcaccaccatgatctttgacggtattccttatttctcccctc
cctcagctccactccatttacacagatctccttgctcctccttaatcaca
cagcaagtttctgcctctgggcatttgcacttgctgtccagcgcctgaaa
tcttcgacaccatagcatcccagcttagtccctcagtcccttcttgttct
gttccattgaccattcactgagttcagtccatgctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_38462035_38463247
seq2: B6Ng01-321G09.b_45_1250 (reverse)

seq1  GATG-AGGGTT-TTAAAGCCCAC----AGACATAGTGACACAGTTTCTCC  44
      |||| |||||| ||||||| |||    ||||||||||||||||||  || 
seq2  GATGAAGGGTTATTAAAGCACACACAGAGACATAGTGACACAGTT--TCA  48

seq1  ATCAAGGCCACACCTCCAAACAGTGCCATTCCCCGGACCAAGCATGTACA  94
      |||||||   || |||  | ||||| ||| ||   || || |||||||||
seq2  ATCAAGG--TCAGCTC--AGCAGTG-CATGCC---GAACAGGCATGTACA  90

seq1  AACCATCACAGTGGCCAAAGCTTTTTAAATGGTCCC-AAGCGAGTGTCCC  143
      ||||||||||||||| ||||| |||||||||||||| ||||||| |||||
seq2  AACCATCACAGTGGCAAAAGC-TTTTAAATGGTCCCAAAGCGAGGGTCCC  139

seq1  TTTTGCTGTTCACACTCCTGTCTGATCCTTTTTCTTCTTTGCTCTGCTTT  193
       ||||||| |||||||||||||||||| ||||   |||||||||||||||
seq2  -TTTGCTG-TCACACTCCTGTCTGATCGTTTT--CTCTTTGCTCTGCTTT  185

seq1  AGGGTAGTGTCTGACGGTGTCCCTTTAGCAGGAACGACAAGGGACATCTT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGTGTCTGACGGTGTCCCTTTAGCAGGAACGACAAGGGACATCTT  235

seq1  GCAGGAGTCAGTTCTCTCCTTCTACTGTCTCACACTTATC-TTCCTTAAA  292
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCAGGAGTCAGTTCTCTCCTTCTACTGTCTCACACTTATCATTCCTTAAA  285

seq1  TGCTATTTTCAGGGGCTGGAAAGATGGTTCAGCACTTCAAAGCACAGACT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTTCAGGGGCTGGAAAGATGGTTCAGCACTTCAAAGCACAGACT  335

seq1  GCTCTTCCAGAGGACCAGGGTTTAATTCCCAGCACCCAGGTGGCAGCAGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCCAGAGGACCAGGGTTTAATTCCCAGCACCCAGGTGGCAGCAGA  385

seq1  TCCAGTTCCAGAGGATCTGACACACATGCAGGCAGGAGGTCTGTTTCCAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTCCAGAGGATCTGACACACATGCAGGCAGGAGGTCTGTTTCCAT  435

seq1  GGTGCTCAACTTGACACCACAGGTCCTTAAGGTCCGGGATTCCCTGCAGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCAACTTGACACCACAGGTCCTTAAGGTCCGGGATTCCCTGCAGC  485

seq1  CCCCATGAAGCCACCTTCTCTCTTCACTGATGACAGCATTCGGTGCTTCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGAAGCCACCTTCTCTCTTCACTGATGACAGCATTCGGTGCTTCT  535

seq1  GCACGCTCCTTTCTCACATCTTTCTTCTGTGCCTGCTGGAACAGGAATTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCTCCTTTCTCACATCTTTCTTCTGTGCCTGCTGGAACAGGAATTC  585

seq1  AAGGTGAGGAAACTGTCCCACCCTGATCCCTGTCCCGCGCTCCTCATTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAGGAAACTGTCCCACCCTGATCCCTGTCCCGCGCTCCTCATTTT  635

seq1  AACCGAAAGCTGGCTGCTTCCCTTGCTGCCGTCTTGAAGGAAACCAGGGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGAAAGCTGGCTGCTTCCCTTGCTGCCGTCTTGAAGGAAACCAGGGA  685

seq1  AAAGGAATCGCTTCAGTGTTTCCCCTGTGCTTTGGAAATGGGAGTCGGGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATCGCTTCAGTGTTTCCCCTGTGCTTTGGAAATGGGAGTCGGGG  735

seq1  GTGGCCTTGTCCAGGCTCCATCATAAACGGTTAAGCCAACGGCCAGGCCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTTGTCCAGGCTCCATCATAAACGGTTAAGCCAACGGCCAGGCCT  785

seq1  GTTCAGCTTTCCACCCCAATCTGTCCATGCCTGATCAGCTGGTGTCTTAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCTTTCCACCCCAATCTGTCCATGCCTGATCAGCTGGTGTCTTAC  835

seq1  TATCAAGAGTATAAGAGAGAGGGCAGCGCACACGGTTAATATTAAATCTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGAGTATAAGAGAGAGGGCAGCGCACACGGTTAATATTAAATCTC  885

seq1  TTCTTCAGAGTTAGTCTCTAAGTTACAGCTAAACACCAGCAATCTTTTGT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGAGTTAGTCTCTAAGTTACAGCTAAACACCAGCAATCTTTTGT  935

seq1  ATCTGTTATCCTTAAAAGGCACGTCACTGAAGTCCTCAGTAATTCTGTCC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTATCCTTAAAAGGCACGTCACTGAAGTCCTCAGTAATTCTGTCC  985

seq1  CTCACCATTCCAGGCAGGACCACCATATGCAGGTCAATGTGTGTTCTTCC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCATTCCAGGCAGGACCACCATATGCAGGTCAATGTGTGTTCTTCC  1035

seq1  TCTTGGACTTTGTTTTGTTTTGATTTTTGAGACAGGGTTTCTCTGTGTAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGACTTTGTTTTGTTTTGATTTTTGAGACAGGGTTTCTCTGTGTAT  1085

seq1  CCTTGGCTGTCCTGGAACTCACTCTGTACACCAGACTGGCCTTGAACTCA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTGTCCTGGAACTCACTCTGTACACCAGACTGGCCTTGAACTCA  1135

seq1  GAGATCCTCCTGCCTCTGCGTCCTGAGTGCTGGGATTAAAGGCGTGCGCC  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCTCCTGCCTCTGCGTCCTGAGTGCTGGGATTAAAGGCGTGCGCC  1185

seq1  ACCATGCCTGGATATGAATTC  1213
      |||||||||||||||||||||
seq2  ACCATGCCTGGATATGAATTC  1206

seq1: chr15_38304933_38306071
seq2: B6Ng01-321G09.g_66_1203

seq1  GAATTCCCCATCCCTCTGGAAAGGCAATCTTTTCTCCTCACCCAACACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCATCCCTCTGGAAAGGCAATCTTTTCTCCTCACCCAACACTC  50

seq1  CTTCCACAGTGACTTGCCCTAGCTTTACACAAAGTGTAGAGTCACACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACAGTGACTTGCCCTAGCTTTACACAAAGTGTAGAGTCACACATC  100

seq1  TTATTAGGCCTCTCCTCTTACTTGAAACAATCATGGGCTGAGGAGATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGGCCTCTCCTCTTACTTGAAACAATCATGGGCTGAGGAGATACT  150

seq1  CAGAGAATACAGAACTTGTTTTACAAGCAGGAGGTTCCGCGTTGGGATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATACAGAACTTGTTTTACAAGCAGGAGGTTCCGCGTTGGGATCC  200

seq1  CTATCAGCCTCATAAAAGGCTGGCTCTGCTGGATATCTATCTATAACCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGCCTCATAAAAGGCTGGCTCTGCTGGATATCTATCTATAACCTA  250

seq1  TCTATTCAGGGTCTATCTATTCAGGGACCGAGTGATCCACTGAGGATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCAGGGTCTATCTATTCAGGGACCGAGTGATCCACTGAGGATCAC  300

seq1  CGCAAGCTTGCTCACAACTTCCGCAAACCTGCGCACCAGAGCTCCTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAGCTTGCTCACAACTTCCGCAAACCTGCGCACCAGAGCTCCTGTGC  350

seq1  ATGCGCACACAAATCACATTGCCTGCTACTCCTTTGACACGTTCTCGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGCACACAAATCACATTGCCTGCTACTCCTTTGACACGTTCTCGTTT  400

seq1  AATCTTCATAGACTGTGACAGGAAAATTGACACCCTCAGGTCACAGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCATAGACTGTGACAGGAAAATTGACACCCTCAGGTCACAGAGGA  450

seq1  AGAAATGAACACTGAGCGAGGCTCTGAAACTGCTCAAGCCGAGCAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAACACTGAGCGAGGCTCTGAAACTGCTCAAGCCGAGCAACTGA  500

seq1  CACGATGGCCTCAGGAGCCACCCCTAGGTGTCTGATTCCAAGGTGGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGATGGCCTCAGGAGCCACCCCTAGGTGTCTGATTCCAAGGTGGGGAG  550

seq1  CTGAGGGCTCTCGAACAGAGAGTCCTGTAGGTTGTAGCTACATGTGTCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGCTCTCGAACAGAGAGTCCTGTAGGTTGTAGCTACATGTGTCGG  600

seq1  TTGTGCCAGCCACACAGCCATCTATCCTGGAAGGACCAAGGGCAAAACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCAGCCACACAGCCATCTATCCTGGAAGGACCAAGGGCAAAACCC  650

seq1  ATTAGCCTTACCTGGGAACTGTCCCCAGAACCTGACACTTTACCCCAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCTTACCTGGGAACTGTCCCCAGAACCTGACACTTTACCCCAGCC  700

seq1  CTCAGCTAAGCCACCTTTACTTCCTGCTTGAGCTAACTATGACTGGACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTAAGCCACCTTTACTTCCTGCTTGAGCTAACTATGACTGGACAC  750

seq1  ACCCTGTGTGGTCATTCTCCAGCAGCGAATAGACCCCTAAAATGTCCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTGTGGTCATTCTCCAGCAGCGAATAGACCCCTAAAATGTCCAGT  800

seq1  TTGATCAGGTCTCTCCTGTGGTCAGAGCCCTCCAATAGTTCCTGCTTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAGGTCTCTCCTGTGGTCAGAGCCCTCCAATAGTTCCTGCTTGGC  850

seq1  TGAGTGACCAAGCCAAGGTACAGCAGCCTAGAAGGTACCCCGCCACTGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGACCAAGCCAAGGTACAGCAGCCTAGAAGGTACCCCGCCACTGCC  900

seq1  CCTCACTCTCACCACCATGATCTTTGACGGTATTCCTTATTTCTCCCCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCTCACCACCATGATCTTTGACGGTATTCCTTATTTCTCCCCTC  950

seq1  CCTCAGCTCCACTCCATTTACACAGATCTCCTTGCTCCTCCTTAATCACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTCCACTCCATTTACACAGATCTCCTTGCTCCTCCTTAATCACA  1000

seq1  CAGCAAGTTTCTGCCTCTGGGCATTTGCACTTGCTGGTCCAGCGCCTGGA  1050
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  CAGCAAGTTTCTGCCTCTGGGCATTTGCACTTGCT-GTCCAGCGCCT-GA  1048

seq1  AATCTTTCGACA-CATAGCATCCCAGCTTAGTCCCTCAGTCCCT--CTGT  1097
      |||| ||||||| |||||||||||||||||||||||||||||||   |||
seq2  AATC-TTCGACACCATAGCATCCCAGCTTAGTCCCTCAGTCCCTTCTTGT  1097

seq1  TCTGTCCAAATGACACATTTCACTGAG-TCAGTCCATGCTCCC  1139
      ||||| | | |||| || ||||||||| |||||||||||||||
seq2  TCTGTTCCATTGAC-CA-TTCACTGAGTTCAGTCCATGCTCCC  1138