BAC Information

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BAC

Clone NameB6Ng01-324O17
Chromosome15 (Build37)
Map Location 19,919,751 - 19,920,851
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh10, EG666857, EG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324O17.bB6Ng01-324O17.g
ACCGA113108GA113109
length1,1141,181
definitionB6Ng01-324O17.b B6Ng01-324O17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaactgaggaatctcaaatgttcaacattcttctttatcagga
gaatgcacatcaaaacaacactgagattccatgtcacaccagtcagaatg
gctaagatcaaaaaccaggtcacagcagatgctggtgaggatgtgtaaca
ctatatgtattagtgggtttctccctgcacactttccattagctcctaaa
taagagacatagacactaggtatttttagtaacaagctctaaacctagac
ttggcagttttgaggctattcaaacttacagaccagccataggccatgtg
ttacttgcttttaagtctcccagggcttgttttgttctgtgtttctcctc
aggacaggctacttttggtcacaccttgttttcattatttttctctcctt
ctccttcatgtcacctcaagctacctactcaatcgctagtccttctttcc
tctttctcctctccagtcacaatctctagccttttattaaccaattatgc
attactgggagtataatttcaagtccataggttaacaatgtacctcaaga
taaggttgtagtgtggaccagggcagagaactcagcttctaattacatgg
catacaaggctagcccaaacaattcctcaggaaaataggaaccaaacttc
ctcaagatccagttttagcacacttgggcatatacgaaaggatagtttca
tgctaaagaaaaattgtttgaccatctcccctagttctctcaaacatgct
tctctgttcataatatgcagaaaatggaaacaacatacatgtacttcaac
agaggaatagataaagaaattgtggtatattttcacattgtaatattatt
cagttgagttatctaacaacaacaacaaaccatgaaaatttcatgtaaaa
gaatgctggaaaatatgcattccaagtgaggtaacattgatccccaaagg
acccttgtcatctatacacttacctgtgaatgttagatttaaacccttca
aaaggctacataagtcatattatgccacaagattatttagagattaggac
tagtagttagggttattcacccttggcagcaatagatagatagtcatggg
tgatgggcatgata
gaattcctaaatctgataaacaaccttagtaaattggctacatataaaat
taactcaaacaaattagtagccttcctctactcaaaaggtaaacaggctg
agaaagaaattatggaaatgacactcttcacaatagtcacaaatattata
aaatatcttggtgtgcctctaaccaagcaagtgaaagatctgtatgacaa
gaacttcaagtctctgaaaaaagaaatcgaagaagacctcagaagatgga
aagatctccatgatcgtggactggcaagattaacatagtaaaattggcca
tcttgctgaaagcaatatacagattcaatgaaatccccatcaaaactccc
actcaattcttcataaagttagaaagaacaatttaaaaattcatttgcat
taagcaaaaaatgaagttattgaggaaatcacaatccctgacctcaagct
gtactacagagcaatcatgaaaaaactgcatggtattggtacagagacag
gtaggtagatcaatgtaatagaactgaagaccctaaaaggaatacatatg
gccaaatgatttttgacagaagagataaaatcatctagggaaaaaaggaa
gcattttcaacaaatggtgctggttcatctagcaatcaccatgtagaaga
atgcaaatcttatttccttgtacaaagcttgaacccaagcagatcaagaa
cctctacaaaaaaccagatacattgaatctaatagaagataaaatgggga
aaatcctcgaggacatgggcacagaggggaaattcctgaacagaacaaca
aggtcttatgctctaagatcaaaaattgacaaatgggacctcataaaatt
gcaaagtttctgtaaggcaaaggacactgtcaataggacaaacgggtatc
aacagattgggaaaagatcttgtattagtcagtgtttctattccctgcac
aaacatcatgaccaagaataagtagggaagaaagggttaattagcttaca
tcccatactgctgtttataaccagaagtcagactggactcaacaagtcag
agcagaggtgatgcagagtcatggagggatgttccttaactgtcctgctt
ccctggctgttcagcctgctctctttagagtaagacataccaagtccaga
gaatggtctccaccccacacaaggggaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_19919751_19920851
seq2: B6Ng01-324O17.b_67_1159

seq1  CAAATGTTCAACATTCTTCTTTATCAGGAGAATGCACATCAAAACAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTCAACATTCTTCTTTATCAGGAGAATGCACATCAAAACAACAC  50

seq1  TGAGATTCCATGTCACACCAGTCAGAATGGCTAAGATCAAAAACCAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCCATGTCACACCAGTCAGAATGGCTAAGATCAAAAACCAGGTC  100

seq1  ACAGCAGATGCTGGTGAGGATGTGTAACACTATATGTATTAGTGGGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGATGCTGGTGAGGATGTGTAACACTATATGTATTAGTGGGTTTC  150

seq1  TCCCTGCACACTTTCCATTAGCTCCTAAATAAGAGACATAGACACTAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCACACTTTCCATTAGCTCCTAAATAAGAGACATAGACACTAGGT  200

seq1  ATTTTTAGTAACAAGCTCTAAACCTAGACTTGGCAGTTTTGAGGCTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAGTAACAAGCTCTAAACCTAGACTTGGCAGTTTTGAGGCTATTC  250

seq1  AAACTTACAGACCAGCCATAGGCCATGTGTTACTTGCTTTTAAGTCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTACAGACCAGCCATAGGCCATGTGTTACTTGCTTTTAAGTCTCCC  300

seq1  AGGGCTTGTTTTGTTCTGTGTTTCTCCTCAGGACAGGCTACTTTTGGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTGTTTTGTTCTGTGTTTCTCCTCAGGACAGGCTACTTTTGGTCA  350

seq1  CACCTTGTTTTCATTATTTTTCTCTCCTTCTCCTTCATGTCACCTCAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGTTTTCATTATTTTTCTCTCCTTCTCCTTCATGTCACCTCAAGC  400

seq1  TACCTACTCAATCGCTAGTCCTTCTTTCCTCTTTCTCCTCTCCAGTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACTCAATCGCTAGTCCTTCTTTCCTCTTTCTCCTCTCCAGTCACA  450

seq1  ATCTCTAGCCTTTTATTAACCAATTATGCATTACTGGGAGTATAATTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAGCCTTTTATTAACCAATTATGCATTACTGGGAGTATAATTTCA  500

seq1  AGTCCATAGGTTAACAATGTACCTCAAGATAAGGTTGTAGTGTGGACCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATAGGTTAACAATGTACCTCAAGATAAGGTTGTAGTGTGGACCAG  550

seq1  GGCAGAGAACTCAGCTTCTAATTACATGGCATACAAGGCTAGCCCAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGAACTCAGCTTCTAATTACATGGCATACAAGGCTAGCCCAAACA  600

seq1  ATTCCTCAGGAAAATAGGAACCAAACTTCCTCAAGATCCAGTTTTAGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGGAAAATAGGAACCAAACTTCCTCAAGATCCAGTTTTAGCAC  650

seq1  ACTTGGGCATATACGAAAGGATAGTTTCATGCTAAAGAAAAATTGTTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGCATATACGAAAGGATAGTTTCATGCTAAAGAAAAATTGTTTGA  700

seq1  CCATCTCCCCTAGTTCTCTCAAACATGCTTCTCTGTTCATAATATGCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCCCTAGTTCTCTCAAACATGCTTCTCTGTTCATAATATGCAGA  750

seq1  AAATGGAAACAACATACATGTACTTCAACAGAGGAATAGATAAAGAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAAACAACATACATGTACTTCAACAGAGGAATAGATAAAGAAATT  800

seq1  GTGGTATATTTTCACATTGTAATATTATTCAGTTGAGTTATCTAACAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATATTTTCACATTGTAATATTATTCAGTTGAGTTATCTAACAACA  850

seq1  ACAACAAAACCATGAAAATTTCATGTAAAAGAATGCTGGAAAATATGCAT  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAC-AAACCATGAAAATTTCATGTAAAAGAATGCTGGAAAATATGCAT  899

seq1  TCCAAGTGAGGTAACATTGATCCCCAAAGGACCCTTGTCATCTATACACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTGAGGTAACATTGATCCCCAAAGGACCCTTGTCATCTATACACT  949

seq1  TACCTGTGAATGTTAGATTTTAACCCTTCAAAAAGGCTAACATAAGTCAT  1000
      |||||||||||||||||||| |||||||| |||||||| |||||||||||
seq2  TACCTGTGAATGTTAGATTTAAACCCTTC-AAAAGGCT-ACATAAGTCAT  997

seq1  A-TATG-CAC-AGATTATATAGAGATTAAGGGACTAGTAGTAAGGGGTTA  1047
      | |||| ||| ||||||| |||||||||  ||||||||||| | ||||||
seq2  ATTATGCCACAAGATTATTTAGAGATTA--GGACTAGTAGTTA-GGGTTA  1044

seq1  TTTCACCCTGGGAAAGGAAATAGATTAGATAGTCATGGGTGAATGGGCAT  1097
       |||||||| || |  | |||||| |||||||||||||||| ||||||||
seq2  -TTCACCCTTGGCA--GCAATAGA-TAGATAGTCATGGGTG-ATGGGCAT  1089

seq1  GAAA  1101
      || |
seq2  GATA  1093